RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 LINC00643Q86TS7 51 aa4.62□□□□□ -1.67
GACAT3-201ENST00000426539 C7orf65Q6ZTY9 151 aa4.61□□□□□ -1.67
GACAT3-201ENST00000426539 BPY2O14599 106 aa4.58□□□□□ -1.68
GACAT3-201ENST00000426539 C4orf26Q17RF5 130 aa4.58□□□□□ -1.68
GACAT3-201ENST00000426539 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
GACAT3-201ENST00000426539 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
GACAT3-201ENST00000426539 MT1BP07438 61 aa4.57□□□□□ -1.68
GACAT3-201ENST00000426539 Q8N9L7 120 aa4.57□□□□□ -1.68
GACAT3-201ENST00000426539 HCG22E2RYF7 251 aa4.56□□□□□ -1.68
GACAT3-201ENST00000426539 C5orf47Q569G3 176 aa4.55□□□□□ -1.68
GACAT3-201ENST00000426539 ATP5EP2Q5VTU8 51 aa4.55□□□□□ -1.68
GACAT3-201ENST00000426539 CASC2Q6XLA1 102 aa4.55□□□□□ -1.68
GACAT3-201ENST00000426539 NEBP20929 6669 aa4.55□□□□□ -1.68
GACAT3-201ENST00000426539 A6NN06 94 aa4.52□□□□□ -1.69
GACAT3-201ENST00000426539 KRTAP19-8Q3LI54 63 aa4.52□□□□□ -1.69
GACAT3-201ENST00000426539 CXCL6P80162 114 aa4.51□□□□□ -1.69
GACAT3-201ENST00000426539 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
GACAT3-201ENST00000426539 FAM236AA0A1B0GUQ0 79 aa4.5□□□□□ -1.69
GACAT3-201ENST00000426539 FAM236BA0A1B0GV22 79 aa4.5□□□□□ -1.69
GACAT3-201ENST00000426539 Q5VV11 94 aa4.5□□□□□ -1.69
GACAT3-201ENST00000426539 KRTAP5-3Q6L8H2 238 aa4.5□□□□□ -1.69
GACAT3-201ENST00000426539 ANAPC13Q9BS18 74 aa4.5□□□□□ -1.69
GACAT3-201ENST00000426539 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
GACAT3-201ENST00000426539 HIST1H4AP62805 103 aaKnown RBP4.49□□□□□ -1.69
GACAT3-201ENST00000426539 S4R3F8 94 aa4.49□□□□□ -1.69
GACAT3-201ENST00000426539 LCA10Q71F78 164 aa4.48□□□□□ -1.69
GACAT3-201ENST00000426539 KRTAP10-5P60370 271 aa4.47□□□□□ -1.69
GACAT3-201ENST00000426539 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
GACAT3-201ENST00000426539 C1orf64Q8NEQ6 169 aa4.47□□□□□ -1.69
GACAT3-201ENST00000426539 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
GACAT3-201ENST00000426539 A0A087WVE0 104 aa4.46□□□□□ -1.7
GACAT3-201ENST00000426539 ATOX1O00244 68 aa4.45□□□□□ -1.7
GACAT3-201ENST00000426539 KLKP1Q107X0 134 aa4.43□□□□□ -1.7
GACAT3-201ENST00000426539 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
GACAT3-201ENST00000426539 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
GACAT3-201ENST00000426539 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
GACAT3-201ENST00000426539 COX7CP15954 63 aa4.39□□□□□ -1.71
GACAT3-201ENST00000426539 SMIM20Q8N5G0 67 aa4.39□□□□□ -1.71
GACAT3-201ENST00000426539 SERP2Q8N6R1 65 aa4.39□□□□□ -1.71
GACAT3-201ENST00000426539 CCDC179H3BU77 68 aa4.38□□□□□ -1.71
GACAT3-201ENST00000426539 UQCRQO14949 82 aa4.38□□□□□ -1.71
GACAT3-201ENST00000426539 TP53AIP1Q9HCN2 124 aa4.37□□□□□ -1.71
GACAT3-201ENST00000426539 TRAV7A0A075B6U4 112 aa4.36□□□□□ -1.71
GACAT3-201ENST00000426539 KMT2DO14686 5537 aa4.36□□□□□ -1.71
GACAT3-201ENST00000426539 CYP4F30PQ9H0H9 118 aa4.35□□□□□ -1.71
GACAT3-201ENST00000426539 CRIPTQ9P021 101 aa4.33□□□□□ -1.72
GACAT3-201ENST00000426539 MDN1Q9NU22 5596 aa4.3□□□□□ -1.72
GACAT3-201ENST00000426539 OCR1Q9BZK8 76 aa4.3□□□□□ -1.72
GACAT3-201ENST00000426539 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
GACAT3-201ENST00000426539 TRAV22A0A0B4J277 110 aa4.27□□□□□ -1.73
GACAT3-201ENST00000426539 LOC101927531A0A1B0GV80 90 aa4.26□□□□□ -1.73
GACAT3-201ENST00000426539 H0YAA0 97 aa4.26□□□□□ -1.73
GACAT3-201ENST00000426539 NDUFC1O43677 76 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 MT1XP80297 61 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 CYSTM1Q9H1C7 97 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 SNURFQ9Y675 71 aa4.24□□□□□ -1.73
GACAT3-201ENST00000426539 TMEM258P61165 79 aa4.23□□□□□ -1.73
GACAT3-201ENST00000426539 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
GACAT3-201ENST00000426539 H7BZZ5 65 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 SPRR2EP22531 72 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 SPRR2BP35325 72 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 SPRR2AP35326 72 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 MP68P56378 58 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
GACAT3-201ENST00000426539 H3BPC8 53 aa4.2□□□□□ -1.74
GACAT3-201ENST00000426539 A8MUN3 132 aa4.19□□□□□ -1.74
GACAT3-201ENST00000426539 H0Y9P7 68 aa4.19□□□□□ -1.74
GACAT3-201ENST00000426539 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
GACAT3-201ENST00000426539 ATP5EP56381 51 aaPredicted RBP4.17□□□□□ -1.74
GACAT3-201ENST00000426539 LINC00208Q96KT6 92 aa4.17□□□□□ -1.74
GACAT3-201ENST00000426539 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
GACAT3-201ENST00000426539 MT3P25713 68 aa4.14□□□□□ -1.75
GACAT3-201ENST00000426539 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
GACAT3-201ENST00000426539 RPS28P62857 69 aaKnown RBP4.14□□□□□ -1.75
GACAT3-201ENST00000426539 PLAC4Q8WY50 150 aa4.14□□□□□ -1.75
GACAT3-201ENST00000426539 P0C880 135 aa4.13□□□□□ -1.75
GACAT3-201ENST00000426539 SERP1Q9Y6X1 66 aa4.11□□□□□ -1.75
GACAT3-201ENST00000426539 KRTAP2-2Q9BYT5 123 aa4.1□□□□□ -1.75
GACAT3-201ENST00000426539 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
GACAT3-201ENST00000426539 SPANXA2-OT1Q8N9U9 137 aa4.09□□□□□ -1.75
GACAT3-201ENST00000426539 R4GN34 69 aa4.09□□□□□ -1.75
GACAT3-201ENST00000426539 M0QZ58 72 aa4.07□□□□□ -1.76
GACAT3-201ENST00000426539 SPRR2DP22532 72 aa4.06□□□□□ -1.76
GACAT3-201ENST00000426539 KRTAP10-7P60409 375 aaPredicted RBP4.05□□□□□ -1.76
GACAT3-201ENST00000426539 SMIM26A0A096LP01 95 aa4.02□□□□□ -1.77
GACAT3-201ENST00000426539 DMAC1Q96GE9 116 aa4.02□□□□□ -1.77
GACAT3-201ENST00000426539 KRTAP10-12P60413 245 aa4.01□□□□□ -1.77
GACAT3-201ENST00000426539 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
GACAT3-201ENST00000426539 COA5Q86WW8 74 aa3.96□□□□□ -1.78
GACAT3-201ENST00000426539 ACYP2P14621 99 aa3.95□□□□□ -1.78
GACAT3-201ENST00000426539 Q1T7F1 81 aa3.91□□□□□ -1.78
GACAT3-201ENST00000426539 V9GYY9 64 aa3.91□□□□□ -1.78
GACAT3-201ENST00000426539 CHKB-CPT1BH3BT56 60 aa3.89□□□□□ -1.79
GACAT3-201ENST00000426539 LINC01558Q9Y6Z2 57 aa3.84□□□□□ -1.79
GACAT3-201ENST00000426539 PSPHP1O15172 72 aa3.82□□□□□ -1.8
GACAT3-201ENST00000426539 SPTSSBQ8NFR3 76 aa3.82□□□□□ -1.8
GACAT3-201ENST00000426539 PRR15LQ9BU68 103 aa3.82□□□□□ -1.8
GACAT3-201ENST00000426539 KRTAP13-4Q3LI77 160 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms