RNA–Protein interactions for RNA: ENST00000425141.5

SLC4A3-207, Transcript of solute carrier family 4 member 3, humanhuman

TSL 1 (best)

Gene SLC4A3, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A3-207ENST00000425141 DNAH17Q9UFH2 4485 aa5.93□□□□□ -1.46
SLC4A3-207ENST00000425141 LUZP6Q538Z0 58 aa5.92□□□□□ -1.46
SLC4A3-207ENST00000425141 P0C880 135 aa5.91□□□□□ -1.46
SLC4A3-207ENST00000425141 HECTD4Q9Y4D8 3996 aa5.91□□□□□ -1.46
SLC4A3-207ENST00000425141 C20orf166-AS1Q96NR2 134 aa5.91□□□□□ -1.46
SLC4A3-207ENST00000425141 SACSQ9NZJ4 4579 aa5.89□□□□□ -1.47
SLC4A3-207ENST00000425141 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
SLC4A3-207ENST00000425141 XP32Q5T750 250 aa5.86□□□□□ -1.47
SLC4A3-207ENST00000425141 DYNC1H1Q14204 4646 aaKnown RBP5.86□□□□□ -1.47
SLC4A3-207ENST00000425141 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
SLC4A3-207ENST00000425141 KRTAP10-8P60410 259 aa5.82□□□□□ -1.48
SLC4A3-207ENST00000425141 VPS13BQ7Z7G8 4022 aa5.82□□□□□ -1.48
SLC4A3-207ENST00000425141 KIAA1109Q2LD37 5005 aa5.79□□□□□ -1.48
SLC4A3-207ENST00000425141 KRTAP3-1Q9BYR8 98 aa5.78□□□□□ -1.48
SLC4A3-207ENST00000425141 FAT2Q9NYQ8 4349 aa5.78□□□□□ -1.48
SLC4A3-207ENST00000425141 RYR2Q92736 4967 aa5.78□□□□□ -1.48
SLC4A3-207ENST00000425141 KRTAP10-4P60372 401 aaPredicted RBP5.77□□□□□ -1.49
SLC4A3-207ENST00000425141 PKD1P98161 4303 aa5.73□□□□□ -1.49
SLC4A3-207ENST00000425141 RYR3Q15413 4870 aa5.73□□□□□ -1.49
SLC4A3-207ENST00000425141 TPRXLQ17RH7 258 aa5.73□□□□□ -1.49
SLC4A3-207ENST00000425141 APOBP04114 4563 aaKnown RBP5.71□□□□□ -1.49
SLC4A3-207ENST00000425141 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
SLC4A3-207ENST00000425141 MYCBP2O75592 4640 aa5.68□□□□□ -1.5
SLC4A3-207ENST00000425141 KRTAP13-4Q3LI77 160 aa5.66□□□□□ -1.5
SLC4A3-207ENST00000425141 KRTAP4-5Q9BYR2 181 aa5.65□□□□□ -1.5
SLC4A3-207ENST00000425141 KRTAP12-2P59991 146 aa5.65□□□□□ -1.51
SLC4A3-207ENST00000425141 RYR1P21817 5038 aa5.64□□□□□ -1.51
SLC4A3-207ENST00000425141 MT1HL1P0DM35 61 aa5.63□□□□□ -1.51
SLC4A3-207ENST00000425141 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
SLC4A3-207ENST00000425141 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.52
SLC4A3-207ENST00000425141 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
SLC4A3-207ENST00000425141 EPPK1P58107 5090 aaKnown RBP5.55□□□□□ -1.52
SLC4A3-207ENST00000425141 KRTAP15-1Q3LI76 137 aa5.55□□□□□ -1.52
SLC4A3-207ENST00000425141 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
SLC4A3-207ENST00000425141 PKHD1L1Q86WI1 4243 aa5.5□□□□□ -1.53
SLC4A3-207ENST00000425141 HSPG2P98160 4391 aa5.5□□□□□ -1.53
SLC4A3-207ENST00000425141 KRTAP12-1P59990 96 aa5.48□□□□□ -1.53
SLC4A3-207ENST00000425141 TNP1P09430 55 aa5.45□□□□□ -1.54
SLC4A3-207ENST00000425141 KRTAP3-3Q9BYR6 98 aa5.41□□□□□ -1.54
SLC4A3-207ENST00000425141 HERC2O95714 4834 aa5.38□□□□□ -1.55
SLC4A3-207ENST00000425141 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
SLC4A3-207ENST00000425141 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SLC4A3-207ENST00000425141 BIRC6Q9NR09 4857 aa5.34□□□□□ -1.55
SLC4A3-207ENST00000425141 LRP2P98164 4655 aa5.34□□□□□ -1.55
SLC4A3-207ENST00000425141 ABCA13Q86UQ4 5058 aa5.29□□□□□ -1.56
SLC4A3-207ENST00000425141 LPAP08519 4548 aa5.27□□□□□ -1.57
SLC4A3-207ENST00000425141 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
SLC4A3-207ENST00000425141 TNXBP22105 4242 aa5.21□□□□□ -1.57
SLC4A3-207ENST00000425141 PP632Q6XCG6 107 aa5.16□□□□□ -1.58
SLC4A3-207ENST00000425141 HERC1Q15751 4861 aa5.16□□□□□ -1.58
SLC4A3-207ENST00000425141 KRTAP4-1Q9BYQ7 146 aa5.14□□□□□ -1.59
SLC4A3-207ENST00000425141 MUC2Q02817 5179 aa5.1□□□□□ -1.59
SLC4A3-207ENST00000425141 PCLOQ9Y6V0 5065 aa5.06□□□□□ -1.6
SLC4A3-207ENST00000425141 RNF213Q63HN8 5207 aa4.99□□□□□ -1.61
SLC4A3-207ENST00000425141 UBR4Q5T4S7 5183 aa4.92□□□□□ -1.62
SLC4A3-207ENST00000425141 FAT4Q6V0I7 4981 aa4.9□□□□□ -1.63
SLC4A3-207ENST00000425141 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
SLC4A3-207ENST00000425141 PRO2289Q9P1D8 64 aa4.82□□□□□ -1.64
SLC4A3-207ENST00000425141 HMCN2Q8NDA2 5059 aa4.8□□□□□ -1.64
SLC4A3-207ENST00000425141 LCE3AQ5TA76 89 aa4.8□□□□□ -1.64
SLC4A3-207ENST00000425141 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
SLC4A3-207ENST00000425141 MT1HP80294 61 aa4.77□□□□□ -1.65
SLC4A3-207ENST00000425141 FSIP2Q5CZC0 6907 aa4.76□□□□□ -1.65
SLC4A3-207ENST00000425141 CRCT1Q9UGL9 99 aa4.75□□□□□ -1.65
SLC4A3-207ENST00000425141 OBSCNQ5VST9 7968 aa4.74□□□□□ -1.65
SLC4A3-207ENST00000425141 KRTAP10-12P60413 245 aa4.7□□□□□ -1.66
SLC4A3-207ENST00000425141 MT2AP02795 61 aa4.67□□□□□ -1.66
SLC4A3-207ENST00000425141 KRTAP12-3P60328 96 aa4.65□□□□□ -1.66
SLC4A3-207ENST00000425141 MT1FP04733 61 aa4.65□□□□□ -1.67
SLC4A3-207ENST00000425141 LCE2CQ5TA81 110 aa4.64□□□□□ -1.67
SLC4A3-207ENST00000425141 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
SLC4A3-207ENST00000425141 INE1O15225 51 aa4.61□□□□□ -1.67
SLC4A3-207ENST00000425141 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
SLC4A3-207ENST00000425141 SYNE1Q8NF91 8797 aaKnown RBP4.57□□□□□ -1.68
SLC4A3-207ENST00000425141 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
SLC4A3-207ENST00000425141 KRTAP19-1Q8IUB9 90 aa4.53□□□□□ -1.68
SLC4A3-207ENST00000425141 KRTAP23-1A1A580 65 aa4.52□□□□□ -1.69
SLC4A3-207ENST00000425141 KRTAP9-8Q9BYQ0 159 aa4.48□□□□□ -1.69
SLC4A3-207ENST00000425141 SPRR5A0A1B0GTR4 108 aa4.48□□□□□ -1.69
SLC4A3-207ENST00000425141 LCE2BO14633 110 aa4.44□□□□□ -1.7
SLC4A3-207ENST00000425141 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
SLC4A3-207ENST00000425141 USH2AO75445 5202 aa4.36□□□□□ -1.71
SLC4A3-207ENST00000425141 KRTAP19-8Q3LI54 63 aa4.34□□□□□ -1.72
SLC4A3-207ENST00000425141 MT1BP07438 61 aa4.33□□□□□ -1.72
SLC4A3-207ENST00000425141 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
SLC4A3-207ENST00000425141 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
SLC4A3-207ENST00000425141 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
SLC4A3-207ENST00000425141 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
SLC4A3-207ENST00000425141 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
SLC4A3-207ENST00000425141 DSTQ03001 7570 aaKnown RBP4.28□□□□□ -1.72
SLC4A3-207ENST00000425141 MT1XP80297 61 aa4.26□□□□□ -1.73
SLC4A3-207ENST00000425141 LCE2AQ5TA79 106 aaPredicted RBP4.22□□□□□ -1.73
SLC4A3-207ENST00000425141 KRTAP8-1Q8IUC2 63 aa4.22□□□□□ -1.73
SLC4A3-207ENST00000425141 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
SLC4A3-207ENST00000425141 KRTAP4-7Q9BYR0 210 aa4.16□□□□□ -1.74
SLC4A3-207ENST00000425141 KMT2DO14686 5537 aa4.15□□□□□ -1.74
SLC4A3-207ENST00000425141 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
SLC4A3-207ENST00000425141 SPRR2FQ96RM1 72 aa4.03□□□□□ -1.76
SLC4A3-207ENST00000425141 MT1GP13640 62 aa3.97□□□□□ -1.77
SLC4A3-207ENST00000425141 SYNE2Q8WXH0 6885 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms