RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 J3QKU1 62 aa3.45□□□□□ -1.86
CNOT4-205ENST00000423368 DNAH6Q9C0G6 4158 aa3.44□□□□□ -1.86
CNOT4-205ENST00000423368 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
CNOT4-205ENST00000423368 MYCBP2O75592 4640 aa3.41□□□□□ -1.86
CNOT4-205ENST00000423368 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
CNOT4-205ENST00000423368 KRTAP4-8Q9BYQ9 185 aa3.41□□□□□ -1.86
CNOT4-205ENST00000423368 DNAH2Q9P225 4427 aa3.4□□□□□ -1.86
CNOT4-205ENST00000423368 Q6ZRN7 208 aaPredicted RBP3.39□□□□□ -1.87
CNOT4-205ENST00000423368 LRP1BQ9NZR2 4599 aa3.39□□□□□ -1.87
CNOT4-205ENST00000423368 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
CNOT4-205ENST00000423368 DNAH3Q8TD57 4116 aa3.37□□□□□ -1.87
CNOT4-205ENST00000423368 R4GN34 69 aa3.36□□□□□ -1.87
CNOT4-205ENST00000423368 KRTAP9-4Q9BYQ2 154 aa3.35□□□□□ -1.87
CNOT4-205ENST00000423368 VPS13BQ7Z7G8 4022 aa3.33□□□□□ -1.88
CNOT4-205ENST00000423368 M0QZ58 72 aa3.32□□□□□ -1.88
CNOT4-205ENST00000423368 KRTAP1-4P0C5Y4 121 aa3.32□□□□□ -1.88
CNOT4-205ENST00000423368 FAT2Q9NYQ8 4349 aa3.32□□□□□ -1.88
CNOT4-205ENST00000423368 SMR3BP02814 79 aaPredicted RBP3.31□□□□□ -1.88
CNOT4-205ENST00000423368 LCE5AQ5TCM9 118 aa3.3□□□□□ -1.88
CNOT4-205ENST00000423368 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
CNOT4-205ENST00000423368 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
CNOT4-205ENST00000423368 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
CNOT4-205ENST00000423368 KRTAP9-9Q9BYP9 154 aa3.29□□□□□ -1.88
CNOT4-205ENST00000423368 PRO2289Q9P1D8 64 aa3.28□□□□□ -1.88
CNOT4-205ENST00000423368 STARD9Q9P2P6 4700 aa3.27□□□□□ -1.89
CNOT4-205ENST00000423368 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
CNOT4-205ENST00000423368 KRTAP9-2Q9BYQ4 174 aa3.25□□□□□ -1.89
CNOT4-205ENST00000423368 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
CNOT4-205ENST00000423368 HSPG2P98160 4391 aa3.24□□□□□ -1.89
CNOT4-205ENST00000423368 KRTAP10-1P60331 282 aa3.24□□□□□ -1.89
CNOT4-205ENST00000423368 LRP1Q07954 4544 aaKnown RBP3.23□□□□□ -1.89
CNOT4-205ENST00000423368 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
CNOT4-205ENST00000423368 FAT1Q14517 4588 aa3.21□□□□□ -1.89
CNOT4-205ENST00000423368 KRTAP4-8A0A0G2JLE6 195 aa3.19□□□□□ -1.9
CNOT4-205ENST00000423368 LPAP08519 4548 aa3.19□□□□□ -1.9
CNOT4-205ENST00000423368 DNAH5Q8TE73 4624 aa3.18□□□□□ -1.9
CNOT4-205ENST00000423368 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
CNOT4-205ENST00000423368 FAT3Q8TDW7 4589 aa3.16□□□□□ -1.9
CNOT4-205ENST00000423368 DNHD1Q96M86 4753 aa3.16□□□□□ -1.9
CNOT4-205ENST00000423368 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
CNOT4-205ENST00000423368 KRTAP4-7Q9BYR0 210 aa3.14□□□□□ -1.91
CNOT4-205ENST00000423368 KRTAP17-1Q9BYP8 105 aa3.13□□□□□ -1.91
CNOT4-205ENST00000423368 KRTAP4-12Q9BQ66 201 aa3.11□□□□□ -1.91
CNOT4-205ENST00000423368 LCE3BQ5TA77 95 aa3.1□□□□□ -1.91
CNOT4-205ENST00000423368 DYNC1H1Q14204 4646 aaKnown RBP3.1□□□□□ -1.91
CNOT4-205ENST00000423368 KRTAP9-3Q9BYQ3 159 aa3.1□□□□□ -1.91
CNOT4-205ENST00000423368 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
CNOT4-205ENST00000423368 PRKDCP78527 4128 aaKnown RBP3.08□□□□□ -1.92
CNOT4-205ENST00000423368 LRP2P98164 4655 aa3.05□□□□□ -1.92
CNOT4-205ENST00000423368 INE1O15225 51 aa3.03□□□□□ -1.92
CNOT4-205ENST00000423368 HYDINQ4G0P3 5121 aa3.02□□□□□ -1.93
CNOT4-205ENST00000423368 TNP1P09430 55 aa3□□□□□ -1.93
CNOT4-205ENST00000423368 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
CNOT4-205ENST00000423368 SACSQ9NZJ4 4579 aa2.99□□□□□ -1.93
CNOT4-205ENST00000423368 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
CNOT4-205ENST00000423368 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
CNOT4-205ENST00000423368 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
CNOT4-205ENST00000423368 KMT2CQ8NEZ4 4911 aaKnown RBP2.97□□□□□ -1.93
CNOT4-205ENST00000423368 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.94
CNOT4-205ENST00000423368 PKD1P98161 4303 aa2.95□□□□□ -1.94
CNOT4-205ENST00000423368 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
CNOT4-205ENST00000423368 RYR1P21817 5038 aa2.93□□□□□ -1.94
CNOT4-205ENST00000423368 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
CNOT4-205ENST00000423368 MUC2Q02817 5179 aa2.92□□□□□ -1.94
CNOT4-205ENST00000423368 PKHD1L1Q86WI1 4243 aa2.9□□□□□ -1.95
CNOT4-205ENST00000423368 KRTAP9-8Q9BYQ0 159 aa2.87□□□□□ -1.95
CNOT4-205ENST00000423368 A0A1B0GVY2 172 aa2.87□□□□□ -1.95
CNOT4-205ENST00000423368 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
CNOT4-205ENST00000423368 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
CNOT4-205ENST00000423368 KRTAP4-5Q9BYR2 181 aa2.81□□□□□ -1.96
CNOT4-205ENST00000423368 TNXBP22105 4242 aa2.79□□□□□ -1.96
CNOT4-205ENST00000423368 Q5VSD8 79 aa2.78□□□□□ -1.96
CNOT4-205ENST00000423368 MT3P25713 68 aa2.78□□□□□ -1.96
CNOT4-205ENST00000423368 KRTAP4-11Q9BYQ6 195 aa2.78□□□□□ -1.97
CNOT4-205ENST00000423368 KRTAP10-4P60372 401 aaPredicted RBP2.76□□□□□ -1.97
CNOT4-205ENST00000423368 EPPK1P58107 5090 aaKnown RBP2.74□□□□□ -1.97
CNOT4-205ENST00000423368 RYR3Q15413 4870 aa2.74□□□□□ -1.97
CNOT4-205ENST00000423368 ABCA13Q86UQ4 5058 aa2.72□□□□□ -1.97
CNOT4-205ENST00000423368 OBSCNQ5VST9 7968 aa2.71□□□□□ -1.97
CNOT4-205ENST00000423368 HMCN2Q8NDA2 5059 aa2.71□□□□□ -1.98
CNOT4-205ENST00000423368 FAT4Q6V0I7 4981 aa2.7□□□□□ -1.98
CNOT4-205ENST00000423368 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
CNOT4-205ENST00000423368 KRTAP2-2Q9BYT5 123 aa2.67□□□□□ -1.98
CNOT4-205ENST00000423368 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
CNOT4-205ENST00000423368 KMT2DO14686 5537 aa2.66□□□□□ -1.98
CNOT4-205ENST00000423368 KRTAP4-1Q9BYQ7 146 aa2.64□□□□□ -1.99
CNOT4-205ENST00000423368 KIAA1109Q2LD37 5005 aa2.64□□□□□ -1.99
CNOT4-205ENST00000423368 PCLOQ9Y6V0 5065 aa2.64□□□□□ -1.99
CNOT4-205ENST00000423368 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
CNOT4-205ENST00000423368 RYR2Q92736 4967 aa2.63□□□□□ -1.99
CNOT4-205ENST00000423368 SYNE1Q8NF91 8797 aaKnown RBP2.62□□□□□ -1.99
CNOT4-205ENST00000423368 KRTAP10-12P60413 245 aa2.6□□□□□ -1.99
CNOT4-205ENST00000423368 MUC17Q685J3 4493 aa2.6□□□□□ -1.99
CNOT4-205ENST00000423368 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
CNOT4-205ENST00000423368 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
CNOT4-205ENST00000423368 LCE3CQ5T5A8 94 aa2.58□□□□□ -2
CNOT4-205ENST00000423368 UBR4Q5T4S7 5183 aa2.58□□□□□ -2
CNOT4-205ENST00000423368 MT1HL1P0DM35 61 aa2.55□□□□□ -2
CNOT4-205ENST00000423368 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
CNOT4-205ENST00000423368 M0R2T5 61 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms