RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 TNP1P09430 55 aa5.47□□□□□ -1.53
SEMA4D-208ENST00000422704 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
SEMA4D-208ENST00000422704 DNAH11Q96DT5 4516 aa5.44□□□□□ -1.54
SEMA4D-208ENST00000422704 DNAH5Q8TE73 4624 aa5.42□□□□□ -1.54
SEMA4D-208ENST00000422704 KRTAP13-3Q3SY46 172 aa5.41□□□□□ -1.54
SEMA4D-208ENST00000422704 PKD1P98161 4303 aa5.39□□□□□ -1.55
SEMA4D-208ENST00000422704 FAT2Q9NYQ8 4349 aa5.38□□□□□ -1.55
SEMA4D-208ENST00000422704 HYDINQ4G0P3 5121 aa5.34□□□□□ -1.55
SEMA4D-208ENST00000422704 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
SEMA4D-208ENST00000422704 TPRXLQ17RH7 258 aa5.32□□□□□ -1.56
SEMA4D-208ENST00000422704 SACSQ9NZJ4 4579 aa5.31□□□□□ -1.56
SEMA4D-208ENST00000422704 KRTAP3-1Q9BYR8 98 aa5.28□□□□□ -1.56
SEMA4D-208ENST00000422704 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
SEMA4D-208ENST00000422704 KRTAP10-4P60372 401 aaPredicted RBP5.26□□□□□ -1.57
SEMA4D-208ENST00000422704 LRP1BQ9NZR2 4599 aa5.26□□□□□ -1.57
SEMA4D-208ENST00000422704 DYNC1H1Q14204 4646 aaKnown RBP5.24□□□□□ -1.57
SEMA4D-208ENST00000422704 RYR2Q92736 4967 aa5.23□□□□□ -1.57
SEMA4D-208ENST00000422704 PP632Q6XCG6 107 aa5.19□□□□□ -1.58
SEMA4D-208ENST00000422704 VPS13BQ7Z7G8 4022 aa5.17□□□□□ -1.58
SEMA4D-208ENST00000422704 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
SEMA4D-208ENST00000422704 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
SEMA4D-208ENST00000422704 KRTAP12-1P59990 96 aa5.15□□□□□ -1.59
SEMA4D-208ENST00000422704 PKHD1L1Q86WI1 4243 aa5.14□□□□□ -1.59
SEMA4D-208ENST00000422704 PKHD1P08F94 4074 aa5.12□□□□□ -1.59
SEMA4D-208ENST00000422704 KRTAP10-6P60371 365 aaPredicted RBP5.09□□□□□ -1.59
SEMA4D-208ENST00000422704 KMT2CQ8NEZ4 4911 aaKnown RBP5.04□□□□□ -1.6
SEMA4D-208ENST00000422704 FAT1Q14517 4588 aa5.01□□□□□ -1.61
SEMA4D-208ENST00000422704 RYR1P21817 5038 aa4.97□□□□□ -1.61
SEMA4D-208ENST00000422704 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
SEMA4D-208ENST00000422704 HSPG2P98160 4391 aa4.97□□□□□ -1.61
SEMA4D-208ENST00000422704 KRTAP4-5Q9BYR2 181 aa4.95□□□□□ -1.62
SEMA4D-208ENST00000422704 RYR3Q15413 4870 aa4.95□□□□□ -1.62
SEMA4D-208ENST00000422704 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
SEMA4D-208ENST00000422704 KRTAP17-1Q9BYP8 105 aa4.92□□□□□ -1.62
SEMA4D-208ENST00000422704 KRTAP3-3Q9BYR6 98 aa4.92□□□□□ -1.62
SEMA4D-208ENST00000422704 TNXBP22105 4242 aa4.91□□□□□ -1.62
SEMA4D-208ENST00000422704 KRTAP3-2Q9BYR7 98 aa4.9□□□□□ -1.62
SEMA4D-208ENST00000422704 FAT3Q8TDW7 4589 aa4.89□□□□□ -1.63
SEMA4D-208ENST00000422704 MYCBP2O75592 4640 aa4.87□□□□□ -1.63
SEMA4D-208ENST00000422704 LRP1Q07954 4544 aaKnown RBP4.8□□□□□ -1.64
SEMA4D-208ENST00000422704 KIAA1109Q2LD37 5005 aa4.79□□□□□ -1.64
SEMA4D-208ENST00000422704 KRTAP15-1Q3LI76 137 aa4.78□□□□□ -1.64
SEMA4D-208ENST00000422704 LORP23490 312 aaPredicted RBP4.77□□□□□ -1.65
SEMA4D-208ENST00000422704 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
SEMA4D-208ENST00000422704 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
SEMA4D-208ENST00000422704 BIRC6Q9NR09 4857 aa4.64□□□□□ -1.67
SEMA4D-208ENST00000422704 HERC2O95714 4834 aa4.62□□□□□ -1.67
SEMA4D-208ENST00000422704 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
SEMA4D-208ENST00000422704 ABCA13Q86UQ4 5058 aa4.56□□□□□ -1.68
SEMA4D-208ENST00000422704 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SEMA4D-208ENST00000422704 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
SEMA4D-208ENST00000422704 MUC17Q685J3 4493 aa4.52□□□□□ -1.69
SEMA4D-208ENST00000422704 KRTAP12-3P60328 96 aa4.51□□□□□ -1.69
SEMA4D-208ENST00000422704 LRP2P98164 4655 aa4.48□□□□□ -1.69
SEMA4D-208ENST00000422704 LPAP08519 4548 aa4.47□□□□□ -1.69
SEMA4D-208ENST00000422704 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
SEMA4D-208ENST00000422704 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.7
SEMA4D-208ENST00000422704 KRTAP19-2Q3LHN2 52 aa4.4□□□□□ -1.7
SEMA4D-208ENST00000422704 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
SEMA4D-208ENST00000422704 LCE2DQ5TA82 110 aaPredicted RBP4.32□□□□□ -1.72
SEMA4D-208ENST00000422704 HERC1Q15751 4861 aa4.31□□□□□ -1.72
SEMA4D-208ENST00000422704 HMCN2Q8NDA2 5059 aa4.3□□□□□ -1.72
SEMA4D-208ENST00000422704 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
SEMA4D-208ENST00000422704 INE1O15225 51 aa4.27□□□□□ -1.73
SEMA4D-208ENST00000422704 KRTAP10-5P60370 271 aa4.25□□□□□ -1.73
SEMA4D-208ENST00000422704 MT1HP80294 61 aa4.24□□□□□ -1.73
SEMA4D-208ENST00000422704 MT2AP02795 61 aa4.24□□□□□ -1.73
SEMA4D-208ENST00000422704 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
SEMA4D-208ENST00000422704 MT1FP04733 61 aa4.21□□□□□ -1.74
SEMA4D-208ENST00000422704 FLGP20930 4061 aaPredicted RBP4.2□□□□□ -1.74
SEMA4D-208ENST00000422704 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
SEMA4D-208ENST00000422704 KRTAP23-1A1A580 65 aa4.18□□□□□ -1.74
SEMA4D-208ENST00000422704 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
SEMA4D-208ENST00000422704 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
SEMA4D-208ENST00000422704 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
SEMA4D-208ENST00000422704 RNF213Q63HN8 5207 aa4.05□□□□□ -1.76
SEMA4D-208ENST00000422704 KRTAP19-1Q8IUB9 90 aa4.03□□□□□ -1.76
SEMA4D-208ENST00000422704 MUC2Q02817 5179 aa4.03□□□□□ -1.76
SEMA4D-208ENST00000422704 KRTAP9-8Q9BYQ0 159 aa4.01□□□□□ -1.77
SEMA4D-208ENST00000422704 KRTAP10-7P60409 375 aaPredicted RBP4□□□□□ -1.77
SEMA4D-208ENST00000422704 SPRR2FQ96RM1 72 aa3.98□□□□□ -1.77
SEMA4D-208ENST00000422704 LCE2BO14633 110 aa3.95□□□□□ -1.78
SEMA4D-208ENST00000422704 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
SEMA4D-208ENST00000422704 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
SEMA4D-208ENST00000422704 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
SEMA4D-208ENST00000422704 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
SEMA4D-208ENST00000422704 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
SEMA4D-208ENST00000422704 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
SEMA4D-208ENST00000422704 MT1XP80297 61 aa3.86□□□□□ -1.79
SEMA4D-208ENST00000422704 LCE2AQ5TA79 106 aaPredicted RBP3.84□□□□□ -1.79
SEMA4D-208ENST00000422704 MT1BP07438 61 aa3.83□□□□□ -1.8
SEMA4D-208ENST00000422704 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
SEMA4D-208ENST00000422704 FCGBPQ9Y6R7 5405 aaPredicted RBP3.77□□□□□ -1.81
SEMA4D-208ENST00000422704 MT1GP13640 62 aa3.76□□□□□ -1.81
SEMA4D-208ENST00000422704 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
SEMA4D-208ENST00000422704 KRTAP4-7Q9BYR0 210 aa3.75□□□□□ -1.81
SEMA4D-208ENST00000422704 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
SEMA4D-208ENST00000422704 KRTAP12-4P60329 112 aa3.68□□□□□ -1.82
SEMA4D-208ENST00000422704 KRTAP9-6A0A140TA67 174 aa3.65□□□□□ -1.82
SEMA4D-208ENST00000422704 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms