RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 KRTAP10-8P60410 259 aa5.06□□□□□ -1.6
SEMA4D-207ENST00000420987 DYNC1H1Q14204 4646 aaKnown RBP5.02□□□□□ -1.61
SEMA4D-207ENST00000420987 KRTAP10-4P60372 401 aaPredicted RBP5.01□□□□□ -1.61
SEMA4D-207ENST00000420987 HYDINQ4G0P3 5121 aa5.01□□□□□ -1.61
SEMA4D-207ENST00000420987 LRP1BQ9NZR2 4599 aa5.01□□□□□ -1.61
SEMA4D-207ENST00000420987 RYR2Q92736 4967 aa5□□□□□ -1.61
SEMA4D-207ENST00000420987 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
SEMA4D-207ENST00000420987 HECTD4Q9Y4D8 3996 aa4.97□□□□□ -1.61
SEMA4D-207ENST00000420987 DNAH8Q96JB1 4490 aa4.94□□□□□ -1.62
SEMA4D-207ENST00000420987 FAT2Q9NYQ8 4349 aa4.92□□□□□ -1.62
SEMA4D-207ENST00000420987 KMT2CQ8NEZ4 4911 aaKnown RBP4.92□□□□□ -1.62
SEMA4D-207ENST00000420987 FAT1Q14517 4588 aa4.91□□□□□ -1.62
SEMA4D-207ENST00000420987 PKD1P98161 4303 aa4.87□□□□□ -1.63
SEMA4D-207ENST00000420987 MT1HL1P0DM35 61 aa4.86□□□□□ -1.63
SEMA4D-207ENST00000420987 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
SEMA4D-207ENST00000420987 RYR3Q15413 4870 aa4.84□□□□□ -1.63
SEMA4D-207ENST00000420987 PKHD1P08F94 4074 aa4.84□□□□□ -1.63
SEMA4D-207ENST00000420987 XP32Q5T750 250 aa4.84□□□□□ -1.63
SEMA4D-207ENST00000420987 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
SEMA4D-207ENST00000420987 APOBP04114 4563 aaKnown RBP4.84□□□□□ -1.63
SEMA4D-207ENST00000420987 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
SEMA4D-207ENST00000420987 VPS13BQ7Z7G8 4022 aa4.83□□□□□ -1.64
SEMA4D-207ENST00000420987 TNP1P09430 55 aa4.83□□□□□ -1.64
SEMA4D-207ENST00000420987 RYR1P21817 5038 aa4.81□□□□□ -1.64
SEMA4D-207ENST00000420987 PP632Q6XCG6 107 aa4.8□□□□□ -1.64
SEMA4D-207ENST00000420987 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
SEMA4D-207ENST00000420987 KRTAP3-1Q9BYR8 98 aa4.79□□□□□ -1.64
SEMA4D-207ENST00000420987 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
SEMA4D-207ENST00000420987 KRTAP17-1Q9BYP8 105 aa4.72□□□□□ -1.65
SEMA4D-207ENST00000420987 HSPG2P98160 4391 aa4.71□□□□□ -1.66
SEMA4D-207ENST00000420987 KRTAP13-4Q3LI77 160 aa4.67□□□□□ -1.66
SEMA4D-207ENST00000420987 BIRC6Q9NR09 4857 aa4.66□□□□□ -1.66
SEMA4D-207ENST00000420987 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
SEMA4D-207ENST00000420987 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
SEMA4D-207ENST00000420987 KRTAP12-1P59990 96 aa4.64□□□□□ -1.67
SEMA4D-207ENST00000420987 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
SEMA4D-207ENST00000420987 HERC2O95714 4834 aa4.58□□□□□ -1.68
SEMA4D-207ENST00000420987 MYCBP2O75592 4640 aa4.56□□□□□ -1.68
SEMA4D-207ENST00000420987 FAT3Q8TDW7 4589 aa4.55□□□□□ -1.68
SEMA4D-207ENST00000420987 PRO2289Q9P1D8 64 aa4.53□□□□□ -1.68
SEMA4D-207ENST00000420987 KRTAP3-3Q9BYR6 98 aa4.51□□□□□ -1.69
SEMA4D-207ENST00000420987 KRTAP3-2Q9BYR7 98 aa4.49□□□□□ -1.69
SEMA4D-207ENST00000420987 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
SEMA4D-207ENST00000420987 ABCA13Q86UQ4 5058 aa4.47□□□□□ -1.69
SEMA4D-207ENST00000420987 TNXBP22105 4242 aa4.47□□□□□ -1.69
SEMA4D-207ENST00000420987 INE1O15225 51 aa4.42□□□□□ -1.7
SEMA4D-207ENST00000420987 KRTAP4-1Q9BYQ7 146 aa4.33□□□□□ -1.72
SEMA4D-207ENST00000420987 PCLOQ9Y6V0 5065 aa4.33□□□□□ -1.72
SEMA4D-207ENST00000420987 LRP2P98164 4655 aa4.32□□□□□ -1.72
SEMA4D-207ENST00000420987 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
SEMA4D-207ENST00000420987 HERC1Q15751 4861 aa4.28□□□□□ -1.72
SEMA4D-207ENST00000420987 LPAP08519 4548 aa4.26□□□□□ -1.73
SEMA4D-207ENST00000420987 LORP23490 312 aaPredicted RBP4.24□□□□□ -1.73
SEMA4D-207ENST00000420987 HMCN2Q8NDA2 5059 aa4.17□□□□□ -1.74
SEMA4D-207ENST00000420987 MT1HP80294 61 aa4.12□□□□□ -1.75
SEMA4D-207ENST00000420987 MUC17Q685J3 4493 aa4.08□□□□□ -1.76
SEMA4D-207ENST00000420987 LCE2CQ5TA81 110 aa4.04□□□□□ -1.76
SEMA4D-207ENST00000420987 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
SEMA4D-207ENST00000420987 RNF213Q63HN8 5207 aa4.04□□□□□ -1.76
SEMA4D-207ENST00000420987 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
SEMA4D-207ENST00000420987 UBR4Q5T4S7 5183 aa4□□□□□ -1.77
SEMA4D-207ENST00000420987 MT2AP02795 61 aa3.98□□□□□ -1.77
SEMA4D-207ENST00000420987 FLGP20930 4061 aaPredicted RBP3.97□□□□□ -1.77
SEMA4D-207ENST00000420987 MUC2Q02817 5179 aa3.95□□□□□ -1.78
SEMA4D-207ENST00000420987 CRCT1Q9UGL9 99 aa3.95□□□□□ -1.78
SEMA4D-207ENST00000420987 MT1FP04733 61 aa3.93□□□□□ -1.78
SEMA4D-207ENST00000420987 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
SEMA4D-207ENST00000420987 FAT4Q6V0I7 4981 aa3.93□□□□□ -1.78
SEMA4D-207ENST00000420987 KRTAP12-3P60328 96 aa3.9□□□□□ -1.78
SEMA4D-207ENST00000420987 SPRR2GQ9BYE4 73 aa3.9□□□□□ -1.78
SEMA4D-207ENST00000420987 KRTAP9-8Q9BYQ0 159 aa3.88□□□□□ -1.79
SEMA4D-207ENST00000420987 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
SEMA4D-207ENST00000420987 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
SEMA4D-207ENST00000420987 LCE2AQ5TA79 106 aaPredicted RBP3.78□□□□□ -1.8
SEMA4D-207ENST00000420987 KRTAP10-5P60370 271 aa3.78□□□□□ -1.8
SEMA4D-207ENST00000420987 KRTAP19-8Q3LI54 63 aa3.76□□□□□ -1.81
SEMA4D-207ENST00000420987 KRTAP9-3Q9BYQ3 159 aa3.75□□□□□ -1.81
SEMA4D-207ENST00000420987 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
SEMA4D-207ENST00000420987 MT1BP07438 61 aa3.68□□□□□ -1.82
SEMA4D-207ENST00000420987 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
SEMA4D-207ENST00000420987 LCE2BO14633 110 aa3.63□□□□□ -1.83
SEMA4D-207ENST00000420987 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
SEMA4D-207ENST00000420987 MT1XP80297 61 aa3.59□□□□□ -1.84
SEMA4D-207ENST00000420987 SPRR5A0A1B0GTR4 108 aa3.56□□□□□ -1.84
SEMA4D-207ENST00000420987 LCE2DQ5TA82 110 aaPredicted RBP3.52□□□□□ -1.85
SEMA4D-207ENST00000420987 KRTAP8-1Q8IUC2 63 aa3.52□□□□□ -1.85
SEMA4D-207ENST00000420987 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
SEMA4D-207ENST00000420987 KRTAP19-6Q3LI70 58 aa3.45□□□□□ -1.86
SEMA4D-207ENST00000420987 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
SEMA4D-207ENST00000420987 KRTAP12-4P60329 112 aa3.44□□□□□ -1.86
SEMA4D-207ENST00000420987 KRTAP19-5Q3LI72 72 aa3.44□□□□□ -1.86
SEMA4D-207ENST00000420987 USH2AO75445 5202 aa3.42□□□□□ -1.86
SEMA4D-207ENST00000420987 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
SEMA4D-207ENST00000420987 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
SEMA4D-207ENST00000420987 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
SEMA4D-207ENST00000420987 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
SEMA4D-207ENST00000420987 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
SEMA4D-207ENST00000420987 SSPOA2VEC9 5147 aa3.27□□□□□ -1.89
SEMA4D-207ENST00000420987 KMT2DO14686 5537 aa3.25□□□□□ -1.89
SEMA4D-207ENST00000420987 KRTAP9-6A0A140TA67 174 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms