RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 IGKV2D-30A0A075B6S6 120 aa5.81□□□□□ -1.48
LINC00339-203ENST00000420503 IGKV2-30P06310 120 aa5.81□□□□□ -1.48
LINC00339-203ENST00000420503 MDN1Q9NU22 5596 aa5.8□□□□□ -1.48
LINC00339-203ENST00000420503 HIST1H4AP62805 103 aaKnown RBP5.79□□□□□ -1.48
LINC00339-203ENST00000420503 TP53AIP1Q9HCN2 124 aa5.79□□□□□ -1.48
LINC00339-203ENST00000420503 KRTAP5-9P26371 169 aa5.78□□□□□ -1.48
LINC00339-203ENST00000420503 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
LINC00339-203ENST00000420503 A0A087WVE0 104 aa5.77□□□□□ -1.49
LINC00339-203ENST00000420503 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
LINC00339-203ENST00000420503 KRTAP19-8Q3LI54 63 aa5.77□□□□□ -1.49
LINC00339-203ENST00000420503 C7orf65Q6ZTY9 151 aa5.77□□□□□ -1.49
LINC00339-203ENST00000420503 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
LINC00339-203ENST00000420503 Q5VV11 94 aa5.76□□□□□ -1.49
LINC00339-203ENST00000420503 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
LINC00339-203ENST00000420503 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
LINC00339-203ENST00000420503 KRTAP4-11Q9BYQ6 195 aa5.74□□□□□ -1.49
LINC00339-203ENST00000420503 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
LINC00339-203ENST00000420503 K7ERU9 68 aa5.72□□□□□ -1.49
LINC00339-203ENST00000420503 KRTAP3-1Q9BYR8 98 aa5.72□□□□□ -1.49
LINC00339-203ENST00000420503 TRAV22A0A0B4J277 110 aa5.7□□□□□ -1.5
LINC00339-203ENST00000420503 UQCRQO14949 82 aa5.68□□□□□ -1.5
LINC00339-203ENST00000420503 OCR1Q9BZK8 76 aa5.66□□□□□ -1.5
LINC00339-203ENST00000420503 MT-ATP8P03928 68 aa5.65□□□□□ -1.5
LINC00339-203ENST00000420503 IMUPQ9GZP8 106 aa5.65□□□□□ -1.5
LINC00339-203ENST00000420503 CYP4F30PQ9H0H9 118 aa5.65□□□□□ -1.5
LINC00339-203ENST00000420503 LCA10Q71F78 164 aa5.64□□□□□ -1.51
LINC00339-203ENST00000420503 LOC101927531A0A1B0GV80 90 aa5.63□□□□□ -1.51
LINC00339-203ENST00000420503 H0Y9P7 68 aa5.63□□□□□ -1.51
LINC00339-203ENST00000420503 KRTAP2-3P0C7H8 128 aa5.63□□□□□ -1.51
LINC00339-203ENST00000420503 KRTAP2-4Q9BYR9 128 aa5.63□□□□□ -1.51
LINC00339-203ENST00000420503 S4R3F8 94 aa5.63□□□□□ -1.51
LINC00339-203ENST00000420503 ATOX1O00244 68 aa5.62□□□□□ -1.51
LINC00339-203ENST00000420503 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
LINC00339-203ENST00000420503 KLKP1Q107X0 134 aa5.59□□□□□ -1.51
LINC00339-203ENST00000420503 KRTAP5-3Q6L8H2 238 aa5.59□□□□□ -1.51
LINC00339-203ENST00000420503 CSAG1Q6PB30 78 aa5.59□□□□□ -1.51
LINC00339-203ENST00000420503 C1orf64Q8NEQ6 169 aa5.58□□□□□ -1.52
LINC00339-203ENST00000420503 SPRR2EP22531 72 aa5.56□□□□□ -1.52
LINC00339-203ENST00000420503 SPRR2BP35325 72 aa5.56□□□□□ -1.52
LINC00339-203ENST00000420503 SPRR2AP35326 72 aa5.56□□□□□ -1.52
LINC00339-203ENST00000420503 LINC00208Q96KT6 92 aa5.56□□□□□ -1.52
LINC00339-203ENST00000420503 SPRR2FQ96RM1 72 aa5.56□□□□□ -1.52
LINC00339-203ENST00000420503 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
LINC00339-203ENST00000420503 MP68P56378 58 aa5.54□□□□□ -1.52
LINC00339-203ENST00000420503 H3BPC8 53 aa5.52□□□□□ -1.53
LINC00339-203ENST00000420503 SVIPQ8NHG7 77 aa5.49□□□□□ -1.53
LINC00339-203ENST00000420503 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
LINC00339-203ENST00000420503 SMIM20Q8N5G0 67 aa5.48□□□□□ -1.53
LINC00339-203ENST00000420503 LCE1AQ5T7P2 110 aa5.46□□□□□ -1.54
LINC00339-203ENST00000420503 MT1XP80297 61 aa5.45□□□□□ -1.54
LINC00339-203ENST00000420503 A8MUN3 132 aa5.44□□□□□ -1.54
LINC00339-203ENST00000420503 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
LINC00339-203ENST00000420503 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
LINC00339-203ENST00000420503 KRTAP8-1Q8IUC2 63 aa5.41□□□□□ -1.54
LINC00339-203ENST00000420503 CRIPTQ9P021 101 aa5.4□□□□□ -1.54
LINC00339-203ENST00000420503 LCE5AQ5TCM9 118 aa5.39□□□□□ -1.55
LINC00339-203ENST00000420503 SPRR2DP22532 72 aa5.37□□□□□ -1.55
LINC00339-203ENST00000420503 SERP2Q8N6R1 65 aa5.37□□□□□ -1.55
LINC00339-203ENST00000420503 DMAC1Q96GE9 116 aa5.37□□□□□ -1.55
LINC00339-203ENST00000420503 SNURFQ9Y675 71 aa5.34□□□□□ -1.55
LINC00339-203ENST00000420503 NDUFC1O43677 76 aa5.33□□□□□ -1.56
LINC00339-203ENST00000420503 C20orf197Q8N268 126 aa5.32□□□□□ -1.56
LINC00339-203ENST00000420503 PRO2289Q9P1D8 64 aa5.3□□□□□ -1.56
LINC00339-203ENST00000420503 ADM2Q7Z4H4 148 aa5.29□□□□□ -1.56
LINC00339-203ENST00000420503 H0YAA0 97 aa5.28□□□□□ -1.56
LINC00339-203ENST00000420503 COX7CP15954 63 aa5.27□□□□□ -1.57
LINC00339-203ENST00000420503 KRTAP12-2P59991 146 aa5.27□□□□□ -1.57
LINC00339-203ENST00000420503 ACYP2P14621 99 aa5.26□□□□□ -1.57
LINC00339-203ENST00000420503 SPANXA2-OT1Q8N9U9 137 aa5.26□□□□□ -1.57
LINC00339-203ENST00000420503 GPR98Q8WXG9 6306 aa5.25□□□□□ -1.57
LINC00339-203ENST00000420503 KRTAP10-7P60409 375 aaPredicted RBP5.22□□□□□ -1.57
LINC00339-203ENST00000420503 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
LINC00339-203ENST00000420503 CYSTM1Q9H1C7 97 aa5.2□□□□□ -1.58
LINC00339-203ENST00000420503 P0C880 135 aa5.18□□□□□ -1.58
LINC00339-203ENST00000420503 H7BZZ5 65 aa5.17□□□□□ -1.58
LINC00339-203ENST00000420503 ANAPC13Q9BS18 74 aa5.17□□□□□ -1.58
LINC00339-203ENST00000420503 CHKB-CPT1BH3BT56 60 aa5.12□□□□□ -1.59
LINC00339-203ENST00000420503 M0QZ58 72 aa5.12□□□□□ -1.59
LINC00339-203ENST00000420503 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
LINC00339-203ENST00000420503 SPTSSBQ8NFR3 76 aa5.12□□□□□ -1.59
LINC00339-203ENST00000420503 R4GN34 69 aa5.11□□□□□ -1.59
LINC00339-203ENST00000420503 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
LINC00339-203ENST00000420503 H3BS24 57 aa5.09□□□□□ -1.59
LINC00339-203ENST00000420503 CCDC179H3BU77 68 aa5.09□□□□□ -1.59
LINC00339-203ENST00000420503 COA5Q86WW8 74 aa5.08□□□□□ -1.6
LINC00339-203ENST00000420503 DSTQ03001 7570 aaKnown RBP5.06□□□□□ -1.6
LINC00339-203ENST00000420503 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
LINC00339-203ENST00000420503 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
LINC00339-203ENST00000420503 TMEM258P61165 79 aa4.9□□□□□ -1.63
LINC00339-203ENST00000420503 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
LINC00339-203ENST00000420503 KRTAP19-7Q3SYF9 63 aa4.88□□□□□ -1.63
LINC00339-203ENST00000420503 SEC61GP60059 68 aa4.86□□□□□ -1.63
LINC00339-203ENST00000420503 SERP1Q9Y6X1 66 aa4.86□□□□□ -1.63
LINC00339-203ENST00000420503 MT1EP04732 61 aa4.83□□□□□ -1.64
LINC00339-203ENST00000420503 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
LINC00339-203ENST00000420503 A0A1B0GU33 70 aa4.8□□□□□ -1.64
LINC00339-203ENST00000420503 A0A1B0GU69 56 aa4.8□□□□□ -1.64
LINC00339-203ENST00000420503 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
LINC00339-203ENST00000420503 MT4P47944 62 aa4.77□□□□□ -1.65
LINC00339-203ENST00000420503 SPATA8Q6RVD6 105 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms