RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 HIST1H4AP62805 103 aaKnown RBP5.37□□□□□ -1.55
SSBP3-206ENST00000420121 KRTAP10-10P60014 251 aa5.36□□□□□ -1.55
SSBP3-206ENST00000420121 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
SSBP3-206ENST00000420121 ACYP1P07311 99 aa5.35□□□□□ -1.55
SSBP3-206ENST00000420121 Q6ZVQ6 151 aa5.35□□□□□ -1.55
SSBP3-206ENST00000420121 FCGBPQ9Y6R7 5405 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-206ENST00000420121 MMP24-AS1A0A0U1RRL7 71 aa5.34□□□□□ -1.55
SSBP3-206ENST00000420121 ATP5EP56381 51 aaPredicted RBP5.34□□□□□ -1.55
SSBP3-206ENST00000420121 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
SSBP3-206ENST00000420121 NDUFS5O43920 106 aa5.33□□□□□ -1.56
SSBP3-206ENST00000420121 WFDC13Q8IUB5 93 aa5.33□□□□□ -1.56
SSBP3-206ENST00000420121 NREPQ16612 68 aa5.32□□□□□ -1.56
SSBP3-206ENST00000420121 LINC00643Q86TS7 51 aa5.32□□□□□ -1.56
SSBP3-206ENST00000420121 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
SSBP3-206ENST00000420121 K7EQZ3 153 aa5.3□□□□□ -1.56
SSBP3-206ENST00000420121 MRPL34Q9BQ48 92 aaKnown RBP5.3□□□□□ -1.56
SSBP3-206ENST00000420121 hDV103S1A0JD37 113 aa5.26□□□□□ -1.57
SSBP3-206ENST00000420121 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
SSBP3-206ENST00000420121 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
SSBP3-206ENST00000420121 Q5W150 140 aa5.24□□□□□ -1.57
SSBP3-206ENST00000420121 LCA10Q71F78 164 aa5.23□□□□□ -1.57
SSBP3-206ENST00000420121 KRTAP19-6Q3LI70 58 aa5.22□□□□□ -1.57
SSBP3-206ENST00000420121 H1FX-AS1Q4G0G2 97 aa5.22□□□□□ -1.57
SSBP3-206ENST00000420121 BPY2O14599 106 aa5.21□□□□□ -1.58
SSBP3-206ENST00000420121 Q8N9L7 120 aa5.21□□□□□ -1.58
SSBP3-206ENST00000420121 IGKV2D-30A0A075B6S6 120 aa5.19□□□□□ -1.58
SSBP3-206ENST00000420121 NDUFC1O43677 76 aa5.19□□□□□ -1.58
SSBP3-206ENST00000420121 IGKV2-30P06310 120 aa5.19□□□□□ -1.58
SSBP3-206ENST00000420121 A8MUN3 132 aa5.18□□□□□ -1.58
SSBP3-206ENST00000420121 KRTAP15-1Q3LI76 137 aa5.18□□□□□ -1.58
SSBP3-206ENST00000420121 C7orf65Q6ZTY9 151 aa5.18□□□□□ -1.58
SSBP3-206ENST00000420121 CASC2Q6XLA1 102 aa5.17□□□□□ -1.58
SSBP3-206ENST00000420121 H7BZZ5 65 aa5.16□□□□□ -1.58
SSBP3-206ENST00000420121 HCG22E2RYF7 251 aa5.15□□□□□ -1.59
SSBP3-206ENST00000420121 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
SSBP3-206ENST00000420121 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
SSBP3-206ENST00000420121 MACF1Q9UPN3 7388 aaKnown RBP5.13□□□□□ -1.59
SSBP3-206ENST00000420121 MP68P56378 58 aa5.13□□□□□ -1.59
SSBP3-206ENST00000420121 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
SSBP3-206ENST00000420121 CXCL6P80162 114 aa5.12□□□□□ -1.59
SSBP3-206ENST00000420121 Q1T7F1 81 aa5.1□□□□□ -1.59
SSBP3-206ENST00000420121 TRAV7A0A075B6U4 112 aa5.07□□□□□ -1.6
SSBP3-206ENST00000420121 ATP5EP2Q5VTU8 51 aa5.07□□□□□ -1.6
SSBP3-206ENST00000420121 C20orf197Q8N268 126 aa5.07□□□□□ -1.6
SSBP3-206ENST00000420121 UBL5Q9BZL1 73 aa5.07□□□□□ -1.6
SSBP3-206ENST00000420121 A6NN06 94 aa5.06□□□□□ -1.6
SSBP3-206ENST00000420121 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
SSBP3-206ENST00000420121 PSPHP1O15172 72 aa5.04□□□□□ -1.6
SSBP3-206ENST00000420121 MT1BP07438 61 aa5.01□□□□□ -1.61
SSBP3-206ENST00000420121 C1orf64Q8NEQ6 169 aa5.01□□□□□ -1.61
SSBP3-206ENST00000420121 S4R3F8 94 aa5.01□□□□□ -1.61
SSBP3-206ENST00000420121 KRTAP6-3Q3LI67 103 aa4.99□□□□□ -1.61
SSBP3-206ENST00000420121 SPRR2GQ9BYE4 73 aa4.98□□□□□ -1.61
SSBP3-206ENST00000420121 TP53AIP1Q9HCN2 124 aa4.98□□□□□ -1.61
SSBP3-206ENST00000420121 KRTAP19-8Q3LI54 63 aa4.97□□□□□ -1.61
SSBP3-206ENST00000420121 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
SSBP3-206ENST00000420121 CYP4F30PQ9H0H9 118 aa4.95□□□□□ -1.62
SSBP3-206ENST00000420121 A0A087WVE0 104 aa4.93□□□□□ -1.62
SSBP3-206ENST00000420121 TRAV22A0A0B4J277 110 aa4.91□□□□□ -1.62
SSBP3-206ENST00000420121 Q5VV11 94 aa4.91□□□□□ -1.62
SSBP3-206ENST00000420121 PRAC1Q96KF2 57 aa4.91□□□□□ -1.62
SSBP3-206ENST00000420121 KRTAP10-5P60370 271 aa4.88□□□□□ -1.63
SSBP3-206ENST00000420121 CDC42SE1Q9NRR8 79 aa4.88□□□□□ -1.63
SSBP3-206ENST00000420121 LOC101927531A0A1B0GV80 90 aa4.87□□□□□ -1.63
SSBP3-206ENST00000420121 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
SSBP3-206ENST00000420121 SPTSSBQ8NFR3 76 aa4.86□□□□□ -1.63
SSBP3-206ENST00000420121 NEBP20929 6669 aa4.83□□□□□ -1.64
SSBP3-206ENST00000420121 CHKB-CPT1BH3BT56 60 aa4.81□□□□□ -1.64
SSBP3-206ENST00000420121 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
SSBP3-206ENST00000420121 H0Y9P7 68 aa4.8□□□□□ -1.64
SSBP3-206ENST00000420121 H0YAA0 97 aa4.78□□□□□ -1.64
SSBP3-206ENST00000420121 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
SSBP3-206ENST00000420121 A8MU10 97 aa4.77□□□□□ -1.65
SSBP3-206ENST00000420121 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
SSBP3-206ENST00000420121 A6NED7 52 aa4.74□□□□□ -1.65
SSBP3-206ENST00000420121 OCR1Q9BZK8 76 aa4.72□□□□□ -1.65
SSBP3-206ENST00000420121 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SSBP3-206ENST00000420121 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
SSBP3-206ENST00000420121 PRR15LQ9BU68 103 aa4.7□□□□□ -1.66
SSBP3-206ENST00000420121 KMT2DO14686 5537 aa4.7□□□□□ -1.66
SSBP3-206ENST00000420121 ROMO1P60602 79 aa4.66□□□□□ -1.66
SSBP3-206ENST00000420121 MT1XP80297 61 aa4.66□□□□□ -1.66
SSBP3-206ENST00000420121 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
SSBP3-206ENST00000420121 P0C880 135 aa4.63□□□□□ -1.67
SSBP3-206ENST00000420121 KRTAP20-1Q3LI63 56 aa4.62□□□□□ -1.67
SSBP3-206ENST00000420121 SPANXA2-OT1Q8N9U9 137 aa4.6□□□□□ -1.67
SSBP3-206ENST00000420121 DMAC1Q96GE9 116 aa4.6□□□□□ -1.67
SSBP3-206ENST00000420121 LINC01558Q9Y6Z2 57 aa4.6□□□□□ -1.67
SSBP3-206ENST00000420121 H3BPC8 53 aa4.59□□□□□ -1.67
SSBP3-206ENST00000420121 PRO2289Q9P1D8 64 aa4.58□□□□□ -1.68
SSBP3-206ENST00000420121 R4GN34 69 aa4.57□□□□□ -1.68
SSBP3-206ENST00000420121 PLAC4Q8WY50 150 aa4.56□□□□□ -1.68
SSBP3-206ENST00000420121 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
SSBP3-206ENST00000420121 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
SSBP3-206ENST00000420121 M0QZ58 72 aa4.54□□□□□ -1.68
SSBP3-206ENST00000420121 K7ERS5 55 aa4.53□□□□□ -1.68
SSBP3-206ENST00000420121 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
SSBP3-206ENST00000420121 LUZP6Q538Z0 58 aa4.52□□□□□ -1.69
SSBP3-206ENST00000420121 SPRR2EP22531 72 aa4.5□□□□□ -1.69
SSBP3-206ENST00000420121 SPRR2BP35325 72 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms