RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
TVP23C-202ENST00000419890 PKHD1P08F94 4074 aa4.05□□□□□ -1.76
TVP23C-202ENST00000419890 DNAH8Q96JB1 4490 aa4.05□□□□□ -1.76
TVP23C-202ENST00000419890 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
TVP23C-202ENST00000419890 LCE1EQ5T753 118 aa4.04□□□□□ -1.76
TVP23C-202ENST00000419890 MIR22HGQ0VDD5 57 aa4.03□□□□□ -1.76
TVP23C-202ENST00000419890 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
TVP23C-202ENST00000419890 LINC01554Q52M75 96 aa4.01□□□□□ -1.77
TVP23C-202ENST00000419890 KIAA1109Q2LD37 5005 aa4.01□□□□□ -1.77
TVP23C-202ENST00000419890 DYNC1H1Q14204 4646 aaKnown RBP4.01□□□□□ -1.77
TVP23C-202ENST00000419890 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
TVP23C-202ENST00000419890 KRTAP16-1A8MUX0 517 aa4□□□□□ -1.77
TVP23C-202ENST00000419890 SPINK6Q6UWN8 80 aa4□□□□□ -1.77
TVP23C-202ENST00000419890 RETNLBQ9BQ08 111 aa4□□□□□ -1.77
TVP23C-202ENST00000419890 HERC2O95714 4834 aa3.99□□□□□ -1.77
TVP23C-202ENST00000419890 CIRBP-AS1Q8TBR5 109 aa3.99□□□□□ -1.77
TVP23C-202ENST00000419890 KRTAP10-1P60331 282 aa3.98□□□□□ -1.77
TVP23C-202ENST00000419890 RYR1P21817 5038 aa3.97□□□□□ -1.77
TVP23C-202ENST00000419890 ANAPC11Q9NYG5 84 aa3.96□□□□□ -1.78
TVP23C-202ENST00000419890 LRP1BQ9NZR2 4599 aa3.96□□□□□ -1.78
TVP23C-202ENST00000419890 DNAH5Q8TE73 4624 aa3.95□□□□□ -1.78
TVP23C-202ENST00000419890 PRAC1Q96KF2 57 aa3.95□□□□□ -1.78
TVP23C-202ENST00000419890 RPS29P62273 56 aaKnown RBP3.94□□□□□ -1.78
TVP23C-202ENST00000419890 HSPG2P98160 4391 aa3.93□□□□□ -1.78
TVP23C-202ENST00000419890 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
TVP23C-202ENST00000419890 SRRM2Q9UQ35 2752 aaKnown RBP3.93□□□□□ -1.78
TVP23C-202ENST00000419890 PCLOQ9Y6V0 5065 aa3.92□□□□□ -1.78
TVP23C-202ENST00000419890 APOBP04114 4563 aaKnown RBP3.92□□□□□ -1.78
TVP23C-202ENST00000419890 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
TVP23C-202ENST00000419890 ADM2Q7Z4H4 148 aa3.91□□□□□ -1.78
TVP23C-202ENST00000419890 ABCA13Q86UQ4 5058 aa3.9□□□□□ -1.78
TVP23C-202ENST00000419890 SPINK1P00995 79 aa3.89□□□□□ -1.79
TVP23C-202ENST00000419890 Q5VSD8 79 aa3.89□□□□□ -1.79
TVP23C-202ENST00000419890 Q6ZSA8 131 aa3.89□□□□□ -1.79
TVP23C-202ENST00000419890 VPS13BQ7Z7G8 4022 aa3.87□□□□□ -1.79
TVP23C-202ENST00000419890 A8MUU9 505 aa3.87□□□□□ -1.79
TVP23C-202ENST00000419890 KRTAP1-4P0C5Y4 121 aa3.87□□□□□ -1.79
TVP23C-202ENST00000419890 CSAG1Q6PB30 78 aa3.87□□□□□ -1.79
TVP23C-202ENST00000419890 FLG2Q5D862 2391 aaPredicted RBP3.85□□□□□ -1.79
TVP23C-202ENST00000419890 FAT1Q14517 4588 aa3.84□□□□□ -1.8
TVP23C-202ENST00000419890 KRTAP25-1Q3LHN0 102 aa3.83□□□□□ -1.8
TVP23C-202ENST00000419890 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
TVP23C-202ENST00000419890 H0YAA0 97 aa3.82□□□□□ -1.8
TVP23C-202ENST00000419890 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
TVP23C-202ENST00000419890 C20orf166-AS1Q96NR2 134 aa3.82□□□□□ -1.8
TVP23C-202ENST00000419890 DMBT1Q9UGM3 2413 aaPredicted RBP3.82□□□□□ -1.8
TVP23C-202ENST00000419890 A0A1B0GU33 70 aa3.81□□□□□ -1.8
TVP23C-202ENST00000419890 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
TVP23C-202ENST00000419890 K7ERS5 55 aa3.8□□□□□ -1.8
TVP23C-202ENST00000419890 KRTAP10-4P60372 401 aaPredicted RBP3.8□□□□□ -1.8
TVP23C-202ENST00000419890 LINC00304Q8N9R0 145 aa3.78□□□□□ -1.8
TVP23C-202ENST00000419890 PKHD1L1Q86WI1 4243 aa3.77□□□□□ -1.81
TVP23C-202ENST00000419890 MYCBP2O75592 4640 aa3.76□□□□□ -1.81
TVP23C-202ENST00000419890 ROMO1P60602 79 aa3.75□□□□□ -1.81
TVP23C-202ENST00000419890 COX6B2Q6YFQ2 88 aa3.73□□□□□ -1.81
TVP23C-202ENST00000419890 HERC1Q15751 4861 aa3.72□□□□□ -1.81
TVP23C-202ENST00000419890 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
TVP23C-202ENST00000419890 KRTAP4-4Q9BYR3 166 aa3.71□□□□□ -1.82
TVP23C-202ENST00000419890 LRP1Q07954 4544 aaKnown RBP3.71□□□□□ -1.82
TVP23C-202ENST00000419890 FAT3Q8TDW7 4589 aa3.69□□□□□ -1.82
TVP23C-202ENST00000419890 KRTAP5-9P26371 169 aa3.68□□□□□ -1.82
TVP23C-202ENST00000419890 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
TVP23C-202ENST00000419890 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
TVP23C-202ENST00000419890 KRTAP10-8P60410 259 aa3.65□□□□□ -1.83
TVP23C-202ENST00000419890 C9orf92A6NGG3 77 aa3.62□□□□□ -1.83
TVP23C-202ENST00000419890 TNXBP22105 4242 aa3.62□□□□□ -1.83
TVP23C-202ENST00000419890 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
TVP23C-202ENST00000419890 HMCN2Q8NDA2 5059 aa3.58□□□□□ -1.84
TVP23C-202ENST00000419890 P0C880 135 aa3.57□□□□□ -1.84
TVP23C-202ENST00000419890 S4R3F8 94 aa3.57□□□□□ -1.84
TVP23C-202ENST00000419890 MT3P25713 68 aa3.55□□□□□ -1.84
TVP23C-202ENST00000419890 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
TVP23C-202ENST00000419890 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
TVP23C-202ENST00000419890 TPRXLQ17RH7 258 aa3.53□□□□□ -1.84
TVP23C-202ENST00000419890 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
TVP23C-202ENST00000419890 CRIPTQ9P021 101 aa3.53□□□□□ -1.84
TVP23C-202ENST00000419890 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
TVP23C-202ENST00000419890 M0QZ58 72 aa3.51□□□□□ -1.85
TVP23C-202ENST00000419890 LRP2P98164 4655 aa3.49□□□□□ -1.85
TVP23C-202ENST00000419890 A0A0D9SG42 100 aa3.48□□□□□ -1.85
TVP23C-202ENST00000419890 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
TVP23C-202ENST00000419890 KRTAP12-2P59991 146 aa3.45□□□□□ -1.86
TVP23C-202ENST00000419890 LPAP08519 4548 aa3.44□□□□□ -1.86
TVP23C-202ENST00000419890 RNF213Q63HN8 5207 aa3.43□□□□□ -1.86
TVP23C-202ENST00000419890 C10orf95Q9H7T3 257 aa3.42□□□□□ -1.86
TVP23C-202ENST00000419890 NDUFAF8A1L188 74 aa3.4□□□□□ -1.87
TVP23C-202ENST00000419890 A0A0A0MQY5 61 aa3.37□□□□□ -1.87
TVP23C-202ENST00000419890 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
TVP23C-202ENST00000419890 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
TVP23C-202ENST00000419890 SEC61BP60468 96 aaKnown RBP3.32□□□□□ -1.88
TVP23C-202ENST00000419890 MUC2Q02817 5179 aa3.31□□□□□ -1.88
TVP23C-202ENST00000419890 MUC17Q685J3 4493 aa3.3□□□□□ -1.88
TVP23C-202ENST00000419890 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
TVP23C-202ENST00000419890 R4GN34 69 aa3.29□□□□□ -1.88
TVP23C-202ENST00000419890 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
TVP23C-202ENST00000419890 KRTAP4-1Q9BYQ7 146 aa3.27□□□□□ -1.89
TVP23C-202ENST00000419890 FAT4Q6V0I7 4981 aa3.25□□□□□ -1.89
TVP23C-202ENST00000419890 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
TVP23C-202ENST00000419890 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
TVP23C-202ENST00000419890 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms