RNA–Protein interactions for RNA: ENST00000419470.6

SFTPA1-202, Transcript of surfactant protein A1, humanhuman

TSL 1 (best) BASIC

Gene SFTPA1, Length 2,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1-202ENST00000419470 ROMO1P60602 79 aa7.41□□□□□ -1.22
SFTPA1-202ENST00000419470 A8MUU9 505 aa7.4□□□□□ -1.23
SFTPA1-202ENST00000419470 IGKV2D-30A0A075B6S6 120 aa7.39□□□□□ -1.23
SFTPA1-202ENST00000419470 HERC2O95714 4834 aa7.37□□□□□ -1.23
SFTPA1-202ENST00000419470 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
SFTPA1-202ENST00000419470 MT1HL1P0DM35 61 aa7.35□□□□□ -1.23
SFTPA1-202ENST00000419470 J3QL48 77 aa7.34□□□□□ -1.23
SFTPA1-202ENST00000419470 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
SFTPA1-202ENST00000419470 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
SFTPA1-202ENST00000419470 H0YAA0 97 aa7.31□□□□□ -1.24
SFTPA1-202ENST00000419470 KRTAP3-3Q9BYR6 98 aa7.27□□□□□ -1.25
SFTPA1-202ENST00000419470 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.25
SFTPA1-202ENST00000419470 LCE2DQ5TA82 110 aaPredicted RBP7.22□□□□□ -1.25
SFTPA1-202ENST00000419470 A0A1B0GU33 70 aa7.2□□□□□ -1.26
SFTPA1-202ENST00000419470 P0C880 135 aa7.17□□□□□ -1.26
SFTPA1-202ENST00000419470 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
SFTPA1-202ENST00000419470 K7ERS5 55 aa7.15□□□□□ -1.27
SFTPA1-202ENST00000419470 C9orf92A6NGG3 77 aa7.12□□□□□ -1.27
SFTPA1-202ENST00000419470 PCLOQ9Y6V0 5065 aa7.1□□□□□ -1.27
SFTPA1-202ENST00000419470 CRIPTQ9P021 101 aa7.08□□□□□ -1.28
SFTPA1-202ENST00000419470 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
SFTPA1-202ENST00000419470 TPRXLQ17RH7 258 aa7□□□□□ -1.29
SFTPA1-202ENST00000419470 XP32Q5T750 250 aa6.99□□□□□ -1.29
SFTPA1-202ENST00000419470 COX6B2Q6YFQ2 88 aa6.99□□□□□ -1.29
SFTPA1-202ENST00000419470 KRTAP3-1Q9BYR8 98 aa6.98□□□□□ -1.29
SFTPA1-202ENST00000419470 SPINT4Q6UDR6 99 aa6.97□□□□□ -1.29
SFTPA1-202ENST00000419470 LPAP08519 4548 aa6.96□□□□□ -1.29
SFTPA1-202ENST00000419470 RPL37P61927 97 aaKnown RBP6.93□□□□□ -1.3
SFTPA1-202ENST00000419470 HERC1Q15751 4861 aa6.93□□□□□ -1.3
SFTPA1-202ENST00000419470 LRP2P98164 4655 aa6.93□□□□□ -1.3
SFTPA1-202ENST00000419470 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
SFTPA1-202ENST00000419470 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
SFTPA1-202ENST00000419470 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
SFTPA1-202ENST00000419470 KRTAP10-6P60371 365 aaPredicted RBP6.77□□□□□ -1.33
SFTPA1-202ENST00000419470 C10orf95Q9H7T3 257 aa6.77□□□□□ -1.33
SFTPA1-202ENST00000419470 KRTAP13-4Q3LI77 160 aa6.76□□□□□ -1.33
SFTPA1-202ENST00000419470 A0A0D9SG42 100 aa6.74□□□□□ -1.33
SFTPA1-202ENST00000419470 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
SFTPA1-202ENST00000419470 MUC17Q685J3 4493 aa6.7□□□□□ -1.34
SFTPA1-202ENST00000419470 S4R3F8 94 aa6.67□□□□□ -1.34
SFTPA1-202ENST00000419470 KRTAP4-1Q9BYQ7 146 aa6.64□□□□□ -1.35
SFTPA1-202ENST00000419470 A0A0A0MQY5 61 aa6.6□□□□□ -1.35
SFTPA1-202ENST00000419470 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
SFTPA1-202ENST00000419470 MUC2Q02817 5179 aa6.57□□□□□ -1.36
SFTPA1-202ENST00000419470 UBR4Q5T4S7 5183 aa6.54□□□□□ -1.36
SFTPA1-202ENST00000419470 KRTAP12-1P59990 96 aa6.53□□□□□ -1.36
SFTPA1-202ENST00000419470 KRTAP19-2Q3LHN2 52 aa6.46□□□□□ -1.38
SFTPA1-202ENST00000419470 RNF213Q63HN8 5207 aa6.44□□□□□ -1.38
SFTPA1-202ENST00000419470 LUZP6Q538Z0 58 aa6.44□□□□□ -1.38
SFTPA1-202ENST00000419470 M0QZ58 72 aa6.4□□□□□ -1.38
SFTPA1-202ENST00000419470 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
SFTPA1-202ENST00000419470 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
SFTPA1-202ENST00000419470 LCE2CQ5TA81 110 aa6.33□□□□□ -1.4
SFTPA1-202ENST00000419470 FAT4Q6V0I7 4981 aa6.31□□□□□ -1.4
SFTPA1-202ENST00000419470 LCE2BO14633 110 aa6.25□□□□□ -1.41
SFTPA1-202ENST00000419470 MT1HP80294 61 aa6.19□□□□□ -1.42
SFTPA1-202ENST00000419470 LCE2AQ5TA79 106 aaPredicted RBP6.11□□□□□ -1.43
SFTPA1-202ENST00000419470 PP632Q6XCG6 107 aa6.1□□□□□ -1.43
SFTPA1-202ENST00000419470 M0R2T5 61 aa6.1□□□□□ -1.43
SFTPA1-202ENST00000419470 R4GN34 69 aa6.1□□□□□ -1.43
SFTPA1-202ENST00000419470 KRTAP9-8Q9BYQ0 159 aa5.97□□□□□ -1.45
SFTPA1-202ENST00000419470 LORP23490 312 aaPredicted RBP5.96□□□□□ -1.46
SFTPA1-202ENST00000419470 MT2AP02795 61 aa5.93□□□□□ -1.46
SFTPA1-202ENST00000419470 MT1FP04733 61 aa5.9□□□□□ -1.46
SFTPA1-202ENST00000419470 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
SFTPA1-202ENST00000419470 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
SFTPA1-202ENST00000419470 CAMK2N1Q7Z7J9 78 aa5.85□□□□□ -1.47
SFTPA1-202ENST00000419470 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
SFTPA1-202ENST00000419470 SPRR2GQ9BYE4 73 aa5.79□□□□□ -1.48
SFTPA1-202ENST00000419470 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
SFTPA1-202ENST00000419470 KRTAP9-3Q9BYQ3 159 aa5.75□□□□□ -1.49
SFTPA1-202ENST00000419470 TNP1P09430 55 aa5.71□□□□□ -1.49
SFTPA1-202ENST00000419470 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.49
SFTPA1-202ENST00000419470 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
SFTPA1-202ENST00000419470 INE1O15225 51 aa5.58□□□□□ -1.52
SFTPA1-202ENST00000419470 MT1BP07438 61 aa5.58□□□□□ -1.52
SFTPA1-202ENST00000419470 KRTAP9-2Q9BYQ4 174 aa5.51□□□□□ -1.53
SFTPA1-202ENST00000419470 USH2AO75445 5202 aa5.47□□□□□ -1.53
SFTPA1-202ENST00000419470 MT1XP80297 61 aa5.39□□□□□ -1.55
SFTPA1-202ENST00000419470 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
SFTPA1-202ENST00000419470 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
SFTPA1-202ENST00000419470 LCE3AQ5TA76 89 aa5.32□□□□□ -1.56
SFTPA1-202ENST00000419470 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
SFTPA1-202ENST00000419470 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
SFTPA1-202ENST00000419470 KRTAP9-6A0A140TA67 174 aa5.25□□□□□ -1.57
SFTPA1-202ENST00000419470 CRCT1Q9UGL9 99 aa5.24□□□□□ -1.57
SFTPA1-202ENST00000419470 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SFTPA1-202ENST00000419470 KRTAP10-7P60409 375 aaPredicted RBP5.16□□□□□ -1.58
SFTPA1-202ENST00000419470 KRTAP10-12P60413 245 aa5.11□□□□□ -1.59
SFTPA1-202ENST00000419470 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
SFTPA1-202ENST00000419470 KRTAP12-3P60328 96 aa5.05□□□□□ -1.6
SFTPA1-202ENST00000419470 KMT2DO14686 5537 aa5.02□□□□□ -1.61
SFTPA1-202ENST00000419470 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
SFTPA1-202ENST00000419470 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
SFTPA1-202ENST00000419470 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
SFTPA1-202ENST00000419470 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
SFTPA1-202ENST00000419470 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
SFTPA1-202ENST00000419470 KRTAP19-7Q3SYF9 63 aa4.81□□□□□ -1.64
SFTPA1-202ENST00000419470 LCE3CQ5T5A8 94 aa4.8□□□□□ -1.64
SFTPA1-202ENST00000419470 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms