RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 DEFB116Q30KQ4 102 aa4.61□□□□□ -1.67
RAPGEF1-205ENST00000419442 A0A1B0GVX0 72 aa4.6□□□□□ -1.67
RAPGEF1-205ENST00000419442 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
RAPGEF1-205ENST00000419442 C14orf132Q9NPU4 83 aa4.58□□□□□ -1.68
RAPGEF1-205ENST00000419442 FAM236AA0A1B0GUQ0 79 aa4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 FAM236BA0A1B0GV22 79 aa4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 ATOX1O00244 68 aa4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 UQCRQO14949 82 aa4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 RBM3P98179 157 aaKnown RBP4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
RAPGEF1-205ENST00000419442 A0A1B0GW54 56 aa4.56□□□□□ -1.68
RAPGEF1-205ENST00000419442 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
RAPGEF1-205ENST00000419442 Q6ZQT0 140 aa4.55□□□□□ -1.68
RAPGEF1-205ENST00000419442 UBL5Q9BZL1 73 aa4.55□□□□□ -1.68
RAPGEF1-205ENST00000419442 KRTAP8-1Q8IUC2 63 aa4.54□□□□□ -1.68
RAPGEF1-205ENST00000419442 CCDC179H3BU77 68 aa4.53□□□□□ -1.68
RAPGEF1-205ENST00000419442 COX7CP15954 63 aa4.53□□□□□ -1.68
RAPGEF1-205ENST00000419442 CXCL6P80162 114 aa4.52□□□□□ -1.69
RAPGEF1-205ENST00000419442 SMIM20Q8N5G0 67 aa4.52□□□□□ -1.69
RAPGEF1-205ENST00000419442 SERP2Q8N6R1 65 aa4.52□□□□□ -1.69
RAPGEF1-205ENST00000419442 DSCR8Q96T75 97 aa4.52□□□□□ -1.69
RAPGEF1-205ENST00000419442 IGKV3D-7A0A0C4DH55 119 aa4.51□□□□□ -1.69
RAPGEF1-205ENST00000419442 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
RAPGEF1-205ENST00000419442 RPS28P62857 69 aaKnown RBP4.47□□□□□ -1.69
RAPGEF1-205ENST00000419442 KLKP1Q107X0 134 aa4.47□□□□□ -1.69
RAPGEF1-205ENST00000419442 C5orf47Q569G3 176 aa4.47□□□□□ -1.69
RAPGEF1-205ENST00000419442 J3KT08 172 aa4.46□□□□□ -1.7
RAPGEF1-205ENST00000419442 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
RAPGEF1-205ENST00000419442 TRAV7A0A075B6U4 112 aa4.44□□□□□ -1.7
RAPGEF1-205ENST00000419442 TMEM258P61165 79 aa4.44□□□□□ -1.7
RAPGEF1-205ENST00000419442 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
RAPGEF1-205ENST00000419442 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
RAPGEF1-205ENST00000419442 A0A087WVE0 104 aa4.41□□□□□ -1.7
RAPGEF1-205ENST00000419442 LCE5AQ5TCM9 118 aa4.41□□□□□ -1.7
RAPGEF1-205ENST00000419442 NDUFC1O43677 76 aa4.4□□□□□ -1.71
RAPGEF1-205ENST00000419442 NDUFB1O75438 58 aa4.4□□□□□ -1.71
RAPGEF1-205ENST00000419442 MT1XP80297 61 aa4.4□□□□□ -1.71
RAPGEF1-205ENST00000419442 NREPQ16612 68 aa4.4□□□□□ -1.71
RAPGEF1-205ENST00000419442 CSAG1Q6PB30 78 aa4.4□□□□□ -1.71
RAPGEF1-205ENST00000419442 SEC61GP60059 68 aa4.39□□□□□ -1.71
RAPGEF1-205ENST00000419442 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
RAPGEF1-205ENST00000419442 CRIPTQ9P021 101 aa4.38□□□□□ -1.71
RAPGEF1-205ENST00000419442 KRTAP4-8A0A0G2JLE6 195 aa4.37□□□□□ -1.71
RAPGEF1-205ENST00000419442 C7orf65Q6ZTY9 151 aa4.37□□□□□ -1.71
RAPGEF1-205ENST00000419442 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
RAPGEF1-205ENST00000419442 BPY2O14599 106 aa4.36□□□□□ -1.71
RAPGEF1-205ENST00000419442 ATP5EP56381 51 aaPredicted RBP4.36□□□□□ -1.71
RAPGEF1-205ENST00000419442 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
RAPGEF1-205ENST00000419442 PRR15Q8IV56 129 aa4.36□□□□□ -1.71
RAPGEF1-205ENST00000419442 OCR1Q9BZK8 76 aa4.36□□□□□ -1.71
RAPGEF1-205ENST00000419442 S4R3F8 94 aa4.35□□□□□ -1.71
RAPGEF1-205ENST00000419442 MRPL34Q9BQ48 92 aaKnown RBP4.34□□□□□ -1.71
RAPGEF1-205ENST00000419442 LCA10Q71F78 164 aa4.33□□□□□ -1.72
RAPGEF1-205ENST00000419442 TMEM254Q8TBM7 123 aa4.33□□□□□ -1.72
RAPGEF1-205ENST00000419442 H7BZZ5 65 aa4.32□□□□□ -1.72
RAPGEF1-205ENST00000419442 C20orf197Q8N268 126 aa4.32□□□□□ -1.72
RAPGEF1-205ENST00000419442 MMP24-AS1A0A0U1RRL7 71 aa4.31□□□□□ -1.72
RAPGEF1-205ENST00000419442 Q5W150 140 aa4.31□□□□□ -1.72
RAPGEF1-205ENST00000419442 CYSTM1Q9H1C7 97 aa4.31□□□□□ -1.72
RAPGEF1-205ENST00000419442 SERP1Q9Y6X1 66 aa4.31□□□□□ -1.72
RAPGEF1-205ENST00000419442 LCE1DQ5T752 114 aa4.29□□□□□ -1.72
RAPGEF1-205ENST00000419442 H3BPC8 53 aa4.27□□□□□ -1.73
RAPGEF1-205ENST00000419442 HCG22E2RYF7 251 aa4.25□□□□□ -1.73
RAPGEF1-205ENST00000419442 NDUFS5O43920 106 aa4.25□□□□□ -1.73
RAPGEF1-205ENST00000419442 SMIM26A0A096LP01 95 aa4.24□□□□□ -1.73
RAPGEF1-205ENST00000419442 hDV103S1A0JD37 113 aa4.24□□□□□ -1.73
RAPGEF1-205ENST00000419442 K7EQZ3 153 aa4.24□□□□□ -1.73
RAPGEF1-205ENST00000419442 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
RAPGEF1-205ENST00000419442 HMCN1Q96RW7 5635 aa4.23□□□□□ -1.73
RAPGEF1-205ENST00000419442 KRTAP5-10Q6L8G5 202 aa4.23□□□□□ -1.73
RAPGEF1-205ENST00000419442 Q8N9L7 120 aa4.23□□□□□ -1.73
RAPGEF1-205ENST00000419442 SNURFQ9Y675 71 aa4.22□□□□□ -1.73
RAPGEF1-205ENST00000419442 C1orf64Q8NEQ6 169 aa4.21□□□□□ -1.74
RAPGEF1-205ENST00000419442 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
RAPGEF1-205ENST00000419442 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
RAPGEF1-205ENST00000419442 MP68P56378 58 aa4.19□□□□□ -1.74
RAPGEF1-205ENST00000419442 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
RAPGEF1-205ENST00000419442 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
RAPGEF1-205ENST00000419442 PLAC4Q8WY50 150 aa4.18□□□□□ -1.74
RAPGEF1-205ENST00000419442 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
RAPGEF1-205ENST00000419442 A8MUN3 132 aa4.17□□□□□ -1.74
RAPGEF1-205ENST00000419442 KRTAP10-7P60409 375 aaPredicted RBP4.17□□□□□ -1.74
RAPGEF1-205ENST00000419442 CASC2Q6XLA1 102 aa4.16□□□□□ -1.74
RAPGEF1-205ENST00000419442 KRTAP5-7Q6L8G8 165 aa4.15□□□□□ -1.75
RAPGEF1-205ENST00000419442 TRAV22A0A0B4J277 110 aa4.14□□□□□ -1.75
RAPGEF1-205ENST00000419442 H0YAA0 97 aa4.14□□□□□ -1.75
RAPGEF1-205ENST00000419442 Q1T7F1 81 aa4.11□□□□□ -1.75
RAPGEF1-205ENST00000419442 H0Y9P7 68 aa4.1□□□□□ -1.75
RAPGEF1-205ENST00000419442 V9GYY9 64 aa4.1□□□□□ -1.75
RAPGEF1-205ENST00000419442 LINC00208Q96KT6 92 aa4.09□□□□□ -1.75
RAPGEF1-205ENST00000419442 MT4P47944 62 aa4.08□□□□□ -1.76
RAPGEF1-205ENST00000419442 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
RAPGEF1-205ENST00000419442 LOC101927531A0A1B0GV80 90 aa4.04□□□□□ -1.76
RAPGEF1-205ENST00000419442 KRTAP4-7Q9BYR0 210 aa4.04□□□□□ -1.76
RAPGEF1-205ENST00000419442 KRTAP4-11Q9BYQ6 195 aa4.03□□□□□ -1.76
RAPGEF1-205ENST00000419442 ADM2Q7Z4H4 148 aa4.02□□□□□ -1.77
RAPGEF1-205ENST00000419442 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
RAPGEF1-205ENST00000419442 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
RAPGEF1-205ENST00000419442 COA5Q86WW8 74 aa3.97□□□□□ -1.77
RAPGEF1-205ENST00000419442 MT3P25713 68 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms