RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 KRTAP3-1Q9BYR8 98 aa6.22□□□□□ -1.41
DDR1-232ENST00000418800 TPRXLQ17RH7 258 aa6.22□□□□□ -1.41
DDR1-232ENST00000418800 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.41
DDR1-232ENST00000418800 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
DDR1-232ENST00000418800 FAT3Q8TDW7 4589 aa6.19□□□□□ -1.42
DDR1-232ENST00000418800 KIAA1109Q2LD37 5005 aa6.19□□□□□ -1.42
DDR1-232ENST00000418800 RYR3Q15413 4870 aa6.14□□□□□ -1.43
DDR1-232ENST00000418800 APOBP04114 4563 aaKnown RBP6.12□□□□□ -1.43
DDR1-232ENST00000418800 KRTAP13-4Q3LI77 160 aa6.12□□□□□ -1.43
DDR1-232ENST00000418800 S4R3F8 94 aa6.1□□□□□ -1.43
DDR1-232ENST00000418800 PKD1P98161 4303 aa6.07□□□□□ -1.44
DDR1-232ENST00000418800 RYR1P21817 5038 aa6.03□□□□□ -1.44
DDR1-232ENST00000418800 RYR2Q92736 4967 aa6.03□□□□□ -1.44
DDR1-232ENST00000418800 EPPK1P58107 5090 aaKnown RBP6.02□□□□□ -1.45
DDR1-232ENST00000418800 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
DDR1-232ENST00000418800 LUZP6Q538Z0 58 aa6□□□□□ -1.45
DDR1-232ENST00000418800 KRTAP10-6P60371 365 aaPredicted RBP5.99□□□□□ -1.45
DDR1-232ENST00000418800 Q5VSD8 79 aa5.97□□□□□ -1.45
DDR1-232ENST00000418800 KRTAP10-8P60410 259 aa5.96□□□□□ -1.46
DDR1-232ENST00000418800 KRTAP15-1Q3LI76 137 aa5.96□□□□□ -1.46
DDR1-232ENST00000418800 RPS29P62273 56 aaKnown RBP5.96□□□□□ -1.46
DDR1-232ENST00000418800 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
DDR1-232ENST00000418800 M0QZ58 72 aa5.91□□□□□ -1.46
DDR1-232ENST00000418800 R4GN34 69 aa5.87□□□□□ -1.47
DDR1-232ENST00000418800 HSPG2P98160 4391 aa5.87□□□□□ -1.47
DDR1-232ENST00000418800 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
DDR1-232ENST00000418800 A0A1B0GVY2 172 aa5.86□□□□□ -1.47
DDR1-232ENST00000418800 KRTAP3-2Q9BYR7 98 aa5.86□□□□□ -1.47
DDR1-232ENST00000418800 KRTAP12-1P59990 96 aa5.85□□□□□ -1.47
DDR1-232ENST00000418800 XP32Q5T750 250 aa5.85□□□□□ -1.47
DDR1-232ENST00000418800 KRTAP4-5Q9BYR2 181 aa5.85□□□□□ -1.47
DDR1-232ENST00000418800 LRP2P98164 4655 aa5.82□□□□□ -1.48
DDR1-232ENST00000418800 LPAP08519 4548 aa5.82□□□□□ -1.48
DDR1-232ENST00000418800 PLAC4Q8WY50 150 aa5.82□□□□□ -1.48
DDR1-232ENST00000418800 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
DDR1-232ENST00000418800 MUC2Q02817 5179 aa5.77□□□□□ -1.49
DDR1-232ENST00000418800 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
DDR1-232ENST00000418800 PKHD1L1Q86WI1 4243 aa5.74□□□□□ -1.49
DDR1-232ENST00000418800 KRTAP10-4P60372 401 aaPredicted RBP5.71□□□□□ -1.49
DDR1-232ENST00000418800 HERC2O95714 4834 aa5.68□□□□□ -1.5
DDR1-232ENST00000418800 LCE2DQ5TA82 110 aaPredicted RBP5.65□□□□□ -1.51
DDR1-232ENST00000418800 HERC1Q15751 4861 aa5.65□□□□□ -1.51
DDR1-232ENST00000418800 RNF213Q63HN8 5207 aa5.61□□□□□ -1.51
DDR1-232ENST00000418800 SEC61BP60468 96 aaKnown RBP5.57□□□□□ -1.52
DDR1-232ENST00000418800 TNXBP22105 4242 aa5.54□□□□□ -1.52
DDR1-232ENST00000418800 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
DDR1-232ENST00000418800 LORP23490 312 aaPredicted RBP5.51□□□□□ -1.53
DDR1-232ENST00000418800 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
DDR1-232ENST00000418800 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
DDR1-232ENST00000418800 BIRC6Q9NR09 4857 aa5.47□□□□□ -1.53
DDR1-232ENST00000418800 UBR4Q5T4S7 5183 aa5.44□□□□□ -1.54
DDR1-232ENST00000418800 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
DDR1-232ENST00000418800 TNP1P09430 55 aa5.33□□□□□ -1.56
DDR1-232ENST00000418800 M0R2T5 61 aa5.31□□□□□ -1.56
DDR1-232ENST00000418800 LCE2CQ5TA81 110 aa5.29□□□□□ -1.56
DDR1-232ENST00000418800 KRTAP4-1Q9BYQ7 146 aa5.27□□□□□ -1.57
DDR1-232ENST00000418800 LCE2AQ5TA79 106 aaPredicted RBP5.2□□□□□ -1.58
DDR1-232ENST00000418800 LCE2BO14633 110 aa5.19□□□□□ -1.58
DDR1-232ENST00000418800 HMCN2Q8NDA2 5059 aa5.18□□□□□ -1.58
DDR1-232ENST00000418800 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.58
DDR1-232ENST00000418800 KRTAP23-1A1A580 65 aa5.13□□□□□ -1.59
DDR1-232ENST00000418800 MUC17Q685J3 4493 aa5□□□□□ -1.61
DDR1-232ENST00000418800 USH2AO75445 5202 aa4.98□□□□□ -1.61
DDR1-232ENST00000418800 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
DDR1-232ENST00000418800 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
DDR1-232ENST00000418800 LCE3AQ5TA76 89 aa4.91□□□□□ -1.62
DDR1-232ENST00000418800 SPRR5A0A1B0GTR4 108 aa4.8□□□□□ -1.64
DDR1-232ENST00000418800 INE1O15225 51 aa4.79□□□□□ -1.64
DDR1-232ENST00000418800 FLGP20930 4061 aaPredicted RBP4.78□□□□□ -1.64
DDR1-232ENST00000418800 KMT2DO14686 5537 aa4.74□□□□□ -1.65
DDR1-232ENST00000418800 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
DDR1-232ENST00000418800 MT1HP80294 61 aa4.68□□□□□ -1.66
DDR1-232ENST00000418800 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
DDR1-232ENST00000418800 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
DDR1-232ENST00000418800 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
DDR1-232ENST00000418800 MT1FP04733 61 aa4.63□□□□□ -1.67
DDR1-232ENST00000418800 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
DDR1-232ENST00000418800 MT2AP02795 61 aa4.57□□□□□ -1.68
DDR1-232ENST00000418800 KRTAP8-1Q8IUC2 63 aa4.51□□□□□ -1.69
DDR1-232ENST00000418800 KRTAP10-7P60409 375 aaPredicted RBP4.49□□□□□ -1.69
DDR1-232ENST00000418800 KRTAP9-8Q9BYQ0 159 aa4.45□□□□□ -1.7
DDR1-232ENST00000418800 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
DDR1-232ENST00000418800 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
DDR1-232ENST00000418800 MT1XP80297 61 aa4.43□□□□□ -1.7
DDR1-232ENST00000418800 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
DDR1-232ENST00000418800 MT1BP07438 61 aa4.38□□□□□ -1.71
DDR1-232ENST00000418800 KRTAP19-5Q3LI72 72 aa4.38□□□□□ -1.71
DDR1-232ENST00000418800 KRTAP4-8A0A0G2JLE6 195 aa4.31□□□□□ -1.72
DDR1-232ENST00000418800 KRTAP4-8Q9BYQ9 185 aa4.31□□□□□ -1.72
DDR1-232ENST00000418800 CRCT1Q9UGL9 99 aa4.29□□□□□ -1.72
DDR1-232ENST00000418800 KRTAP19-8Q3LI54 63 aa4.29□□□□□ -1.72
DDR1-232ENST00000418800 LCE3CQ5T5A8 94 aa4.29□□□□□ -1.72
DDR1-232ENST00000418800 KRTAP4-7Q9BYR0 210 aa4.28□□□□□ -1.72
DDR1-232ENST00000418800 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
DDR1-232ENST00000418800 MUC12Q9UKN1 5478 aa4.25□□□□□ -1.73
DDR1-232ENST00000418800 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
DDR1-232ENST00000418800 KRTAP9-3Q9BYQ3 159 aa4.24□□□□□ -1.73
DDR1-232ENST00000418800 SYNE1Q8NF91 8797 aaKnown RBP4.23□□□□□ -1.73
DDR1-232ENST00000418800 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
DDR1-232ENST00000418800 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms