RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 MT1XP80297 61 aa3.29□□□□□ -1.88
HLA-DPA1-241ENST00000417724 TSTD3H0UI37 97 aa3.28□□□□□ -1.88
HLA-DPA1-241ENST00000417724 H3BT86 120 aa3.28□□□□□ -1.88
HLA-DPA1-241ENST00000417724 PLAC4Q8WY50 150 aa3.28□□□□□ -1.88
HLA-DPA1-241ENST00000417724 TP53AIP1Q9HCN2 124 aa3.28□□□□□ -1.88
HLA-DPA1-241ENST00000417724 H0YAA0 97 aa3.27□□□□□ -1.89
HLA-DPA1-241ENST00000417724 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
HLA-DPA1-241ENST00000417724 A0A087WVE0 104 aa3.26□□□□□ -1.89
HLA-DPA1-241ENST00000417724 A8MUN3 132 aa3.26□□□□□ -1.89
HLA-DPA1-241ENST00000417724 NDUFC1O43677 76 aa3.25□□□□□ -1.89
HLA-DPA1-241ENST00000417724 LCE3BQ5TA77 95 aa3.25□□□□□ -1.89
HLA-DPA1-241ENST00000417724 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
HLA-DPA1-241ENST00000417724 KRTAP4-8A0A0G2JLE6 195 aa3.23□□□□□ -1.89
HLA-DPA1-241ENST00000417724 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
HLA-DPA1-241ENST00000417724 UBL5Q9BZL1 73 aa3.23□□□□□ -1.89
HLA-DPA1-241ENST00000417724 ADM2Q7Z4H4 148 aa3.22□□□□□ -1.89
HLA-DPA1-241ENST00000417724 LOC101927531A0A1B0GV80 90 aa3.18□□□□□ -1.9
HLA-DPA1-241ENST00000417724 C9orf118A6NHY6 69 aa3.18□□□□□ -1.9
HLA-DPA1-241ENST00000417724 A0A1W2PPM0 123 aa3.17□□□□□ -1.9
HLA-DPA1-241ENST00000417724 BATFQ16520 125 aa3.17□□□□□ -1.9
HLA-DPA1-241ENST00000417724 R4GN34 69 aa3.17□□□□□ -1.9
HLA-DPA1-241ENST00000417724 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
HLA-DPA1-241ENST00000417724 TRAV22A0A0B4J277 110 aa3.16□□□□□ -1.9
HLA-DPA1-241ENST00000417724 K7EP34 96 aa3.16□□□□□ -1.9
HLA-DPA1-241ENST00000417724 ACYP1P07311 99 aa3.16□□□□□ -1.9
HLA-DPA1-241ENST00000417724 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
HLA-DPA1-241ENST00000417724 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
HLA-DPA1-241ENST00000417724 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
HLA-DPA1-241ENST00000417724 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
HLA-DPA1-241ENST00000417724 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
HLA-DPA1-241ENST00000417724 TMA7Q9Y2S6 64 aaKnown RBP3.13□□□□□ -1.91
HLA-DPA1-241ENST00000417724 M0QZ58 72 aa3.12□□□□□ -1.91
HLA-DPA1-241ENST00000417724 TAX1BP3O14907 124 aa3.12□□□□□ -1.91
HLA-DPA1-241ENST00000417724 SPCS1Q9Y6A9 102 aa3.11□□□□□ -1.91
HLA-DPA1-241ENST00000417724 P0C880 135 aa3.1□□□□□ -1.91
HLA-DPA1-241ENST00000417724 LINC01554Q52M75 96 aa3.1□□□□□ -1.91
HLA-DPA1-241ENST00000417724 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.91
HLA-DPA1-241ENST00000417724 ATOX1O00244 68 aa3.09□□□□□ -1.91
HLA-DPA1-241ENST00000417724 UQCRQO14949 82 aa3.08□□□□□ -1.92
HLA-DPA1-241ENST00000417724 KRTAP4-9Q9BYQ8 210 aa3.08□□□□□ -1.92
HLA-DPA1-241ENST00000417724 H0Y9P7 68 aa3.07□□□□□ -1.92
HLA-DPA1-241ENST00000417724 SMIM6P0DI80 62 aa3.06□□□□□ -1.92
HLA-DPA1-241ENST00000417724 PRO0461Q9UI25 63 aa3.05□□□□□ -1.92
HLA-DPA1-241ENST00000417724 LINC00208Q96KT6 92 aa3.01□□□□□ -1.93
HLA-DPA1-241ENST00000417724 KRTAP4-7Q9BYR0 210 aa3.01□□□□□ -1.93
HLA-DPA1-241ENST00000417724 LCE1DQ5T752 114 aa3□□□□□ -1.93
HLA-DPA1-241ENST00000417724 LCE5AQ5TCM9 118 aa3□□□□□ -1.93
HLA-DPA1-241ENST00000417724 MT-ATP8P03928 68 aa2.99□□□□□ -1.93
HLA-DPA1-241ENST00000417724 HIST1H4AP62805 103 aaKnown RBP2.99□□□□□ -1.93
HLA-DPA1-241ENST00000417724 MP68P56378 58 aa2.97□□□□□ -1.93
HLA-DPA1-241ENST00000417724 ETDBQ3ZM63 59 aa2.97□□□□□ -1.93
HLA-DPA1-241ENST00000417724 F8W1H4 67 aa2.96□□□□□ -1.94
HLA-DPA1-241ENST00000417724 COL5A1-AS1Q5SY13 56 aa2.96□□□□□ -1.94
HLA-DPA1-241ENST00000417724 ATP5EP2Q5VTU8 51 aa2.96□□□□□ -1.94
HLA-DPA1-241ENST00000417724 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.94
HLA-DPA1-241ENST00000417724 GTF2H5Q6ZYL4 71 aa2.95□□□□□ -1.94
HLA-DPA1-241ENST00000417724 KRTAP19-7Q3SYF9 63 aa2.94□□□□□ -1.94
HLA-DPA1-241ENST00000417724 DMAC1Q96GE9 116 aa2.94□□□□□ -1.94
HLA-DPA1-241ENST00000417724 MT1EP04732 61 aa2.93□□□□□ -1.94
HLA-DPA1-241ENST00000417724 LCE4AQ5TA78 99 aa2.93□□□□□ -1.94
HLA-DPA1-241ENST00000417724 MT4P47944 62 aa2.92□□□□□ -1.94
HLA-DPA1-241ENST00000417724 CYSTM1Q9H1C7 97 aa2.92□□□□□ -1.94
HLA-DPA1-241ENST00000417724 OCR1Q9BZK8 76 aa2.9□□□□□ -1.95
HLA-DPA1-241ENST00000417724 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.95
HLA-DPA1-241ENST00000417724 TRAV7A0A075B6U4 112 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 FAM240AA0A1B0GVK7 77 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 H3BPC8 53 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 MT1GP13640 62 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 CAMK2N1Q7Z7J9 78 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
HLA-DPA1-241ENST00000417724 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
HLA-DPA1-241ENST00000417724 SPTSSBQ8NFR3 76 aa2.88□□□□□ -1.95
HLA-DPA1-241ENST00000417724 AHNAK2Q8IVF2 5795 aa2.87□□□□□ -1.95
HLA-DPA1-241ENST00000417724 ACYP2P14621 99 aa2.85□□□□□ -1.95
HLA-DPA1-241ENST00000417724 LINC00643Q86TS7 51 aa2.85□□□□□ -1.95
HLA-DPA1-241ENST00000417724 LOC105371267A0A1B0GV96 52 aa2.82□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
HLA-DPA1-241ENST00000417724 A0A0D9SG42 100 aa2.81□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
HLA-DPA1-241ENST00000417724 MT1MQ8N339 61 aa2.81□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP4-11Q9BYQ6 195 aa2.81□□□□□ -1.96
HLA-DPA1-241ENST00000417724 CHKB-CPT1BH3BT56 60 aa2.79□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP13-4Q3LI77 160 aa2.79□□□□□ -1.96
HLA-DPA1-241ENST00000417724 SCGB1A1P11684 91 aa2.78□□□□□ -1.96
HLA-DPA1-241ENST00000417724 KRTAP5-3Q6L8H2 238 aa2.78□□□□□ -1.96
HLA-DPA1-241ENST00000417724 MT1LQ93083 61 aa2.76□□□□□ -1.97
HLA-DPA1-241ENST00000417724 KRTAP4-3Q9BYR4 195 aa2.74□□□□□ -1.97
HLA-DPA1-241ENST00000417724 KRTAP19-4Q3LI73 84 aa2.72□□□□□ -1.97
HLA-DPA1-241ENST00000417724 SPRR5A0A1B0GTR4 108 aa2.71□□□□□ -1.98
HLA-DPA1-241ENST00000417724 SPINT4Q6UDR6 99 aa2.69□□□□□ -1.98
HLA-DPA1-241ENST00000417724 PCP4L1A6NKN8 68 aa2.67□□□□□ -1.98
HLA-DPA1-241ENST00000417724 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
HLA-DPA1-241ENST00000417724 C10orf95Q9H7T3 257 aa2.66□□□□□ -1.98
HLA-DPA1-241ENST00000417724 SEC61GP60059 68 aa2.64□□□□□ -1.99
HLA-DPA1-241ENST00000417724 SPATA8Q6RVD6 105 aa2.64□□□□□ -1.99
HLA-DPA1-241ENST00000417724 SMIM20Q8N5G0 67 aa2.64□□□□□ -1.99
HLA-DPA1-241ENST00000417724 SERP1Q9Y6X1 66 aa2.64□□□□□ -1.99
HLA-DPA1-241ENST00000417724 KRTAP12-1P59990 96 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms