RNA–Protein interactions for RNA: ENST00000417503.1

SSXP9-201, Transcript of SSX family pseudogene 9, humanhuman

BASIC

Gene SSXP9, Length 292 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP9-201ENST00000417503 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
SSXP9-201ENST00000417503 PRM1P04553 51 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 SPRR2GQ9BYE4 73 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 ACACBO00763 2458 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 AKAP9Q99996 3911 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 CFAP47Q6ZTR5 3102 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 FREM2Q5SZK8 3169 aa0.83□□□□□ -2.28
SSXP9-201ENST00000417503 NBEAL2Q6ZNJ1 2754 aa0.82□□□□□ -2.28
SSXP9-201ENST00000417503 TEX15Q9BXT5 2789 aa0.82□□□□□ -2.28
SSXP9-201ENST00000417503 FRAS1Q86XX4 4008 aa0.82□□□□□ -2.28
SSXP9-201ENST00000417503 GCN1Q92616 2671 aaKnown RBP0.82□□□□□ -2.28
SSXP9-201ENST00000417503 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
SSXP9-201ENST00000417503 MKI67P46013 3256 aaKnown RBP0.82□□□□□ -2.28
SSXP9-201ENST00000417503 PDZD2O15018 2839 aa0.82□□□□□ -2.28
SSXP9-201ENST00000417503 ZFYVE26Q68DK2 2539 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 STAB1Q9NY15 2570 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 KRTAP5-8O75690 187 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 SPRR2AP35326 72 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 CELSR3Q9NYQ7 3312 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 TACC2O95359 2948 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 CEP295Q9C0D2 2601 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 BSNQ9UPA5 3926 aa0.81□□□□□ -2.28
SSXP9-201ENST00000417503 NSD1Q96L73 2696 aaPredicted RBP0.81□□□□□ -2.28
SSXP9-201ENST00000417503 LAMA2P24043 3122 aaKnown RBP0.8□□□□□ -2.28
SSXP9-201ENST00000417503 CENPFP49454 3210 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 NBEAL1Q6ZS30 2694 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 SPRR2BP35325 72 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 LOC400499M0QZD8 3231 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 VPS13DQ5THJ4 4388 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 DMXL2Q8TDJ6 3036 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 ITPR2Q14571 2701 aa0.8□□□□□ -2.28
SSXP9-201ENST00000417503 PKD1L1Q8TDX9 2849 aa0.79□□□□□ -2.28
SSXP9-201ENST00000417503 MGAM2Q2M2H8 2515 aa0.79□□□□□ -2.28
SSXP9-201ENST00000417503 ATMQ13315 3056 aa0.79□□□□□ -2.28
SSXP9-201ENST00000417503 FLNAP21333 2647 aaKnown RBP0.79□□□□□ -2.28
SSXP9-201ENST00000417503 TEP1Q99973 2627 aaKnown RBP0.78□□□□□ -2.28
SSXP9-201ENST00000417503 KRTAP19-3Q7Z4W3 81 aa0.78□□□□□ -2.28
SSXP9-201ENST00000417503 PRKDCP78527 4128 aaKnown RBP0.78□□□□□ -2.28
SSXP9-201ENST00000417503 LAMA3Q16787 3333 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 UNC80Q8N2C7 3258 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 MT1EP04732 61 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 SPRR2DP22532 72 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 KRTAP19-5Q3LI72 72 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 ANKRD11Q6UB99 2663 aaPredicted RBP0.77□□□□□ -2.29
SSXP9-201ENST00000417503 HIVEP1P15822 2718 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 XIRP2A4UGR9 3374 aa0.77□□□□□ -2.29
SSXP9-201ENST00000417503 NBPF19A0A087WUL8 3843 aa0.76□□□□□ -2.29
SSXP9-201ENST00000417503 BRCA2P51587 3418 aa0.76□□□□□ -2.29
SSXP9-201ENST00000417503 HRNRQ86YZ3 2850 aaPredicted RBP0.76□□□□□ -2.29
SSXP9-201ENST00000417503 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
SSXP9-201ENST00000417503 SPTBN5Q9NRC6 3674 aaKnown RBP0.76□□□□□ -2.29
SSXP9-201ENST00000417503 VCANP13611 3396 aa0.76□□□□□ -2.29
SSXP9-201ENST00000417503 DMDP11532 3685 aa0.75□□□□□ -2.29
SSXP9-201ENST00000417503 RELNP78509 3460 aa0.75□□□□□ -2.29
SSXP9-201ENST00000417503 MT1LQ93083 61 aa0.75□□□□□ -2.29
SSXP9-201ENST00000417503 FAT2Q9NYQ8 4349 aa0.75□□□□□ -2.29
SSXP9-201ENST00000417503 USP34Q70CQ2 3546 aa0.75□□□□□ -2.29
SSXP9-201ENST00000417503 CSMD1Q96PZ7 3565 aa0.74□□□□□ -2.29
SSXP9-201ENST00000417503 SPRR2FQ96RM1 72 aa0.74□□□□□ -2.29
SSXP9-201ENST00000417503 SPENQ96T58 3664 aaKnown RBP0.74□□□□□ -2.29
SSXP9-201ENST00000417503 KRTAP4-1Q9BYQ7 146 aa0.73□□□□□ -2.29
SSXP9-201ENST00000417503 IGSF10Q6WRI0 2623 aa0.73□□□□□ -2.29
SSXP9-201ENST00000417503 MXRA5Q9NR99 2828 aa0.73□□□□□ -2.29
SSXP9-201ENST00000417503 DNAH11Q96DT5 4516 aa0.72□□□□□ -2.29
SSXP9-201ENST00000417503 SVEP1Q4LDE5 3571 aa0.72□□□□□ -2.29
SSXP9-201ENST00000417503 MT1HP80294 61 aa0.72□□□□□ -2.29
SSXP9-201ENST00000417503 KRTAP19-8Q3LI54 63 aa0.72□□□□□ -2.29
SSXP9-201ENST00000417503 MUC3AQ02505 3323 aa0.72□□□□□ -2.29
SSXP9-201ENST00000417503 TENM3Q9P273 2699 aa0.71□□□□□ -2.29
SSXP9-201ENST00000417503 CDH23Q9H251 3354 aa0.71□□□□□ -2.3
SSXP9-201ENST00000417503 SPRR2EP22531 72 aa0.71□□□□□ -2.3
SSXP9-201ENST00000417503 FLNBO75369 2602 aaKnown RBP0.71□□□□□ -2.3
SSXP9-201ENST00000417503 HUWE1Q7Z6Z7 4374 aaKnown RBP0.71□□□□□ -2.3
SSXP9-201ENST00000417503 ASPMQ8IZT6 3477 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 HMCN1Q96RW7 5635 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 LAMA5O15230 3695 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 DNAH14Q0VDD8 3507 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 WDFY3Q8IZQ1 3526 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 DNAH8Q96JB1 4490 aa0.7□□□□□ -2.3
SSXP9-201ENST00000417503 SMG1Q96Q15 3661 aaKnown RBP0.7□□□□□ -2.3
SSXP9-201ENST00000417503 EYSQ5T1H1 3165 aa0.69□□□□□ -2.3
SSXP9-201ENST00000417503 MYCBP2O75592 4640 aa0.69□□□□□ -2.3
SSXP9-201ENST00000417503 CMYA5Q8N3K9 4069 aa0.69□□□□□ -2.3
SSXP9-201ENST00000417503 ADGRG4Q8IZF6 3080 aa0.69□□□□□ -2.3
SSXP9-201ENST00000417503 TRRAPQ9Y4A5 3859 aa0.69□□□□□ -2.3
SSXP9-201ENST00000417503 LYSTQ99698 3801 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 CSMD2Q7Z408 3487 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 MAST4O15021 2626 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 KRTAP6-2Q3LI66 62 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 SACSQ9NZJ4 4579 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 KMT2AQ03164 3969 aa0.68□□□□□ -2.3
SSXP9-201ENST00000417503 TNXBP22105 4242 aa0.67□□□□□ -2.3
SSXP9-201ENST00000417503 MYO15AQ9UKN7 3530 aa0.67□□□□□ -2.3
SSXP9-201ENST00000417503 DNAH3Q8TD57 4116 aa0.67□□□□□ -2.3
SSXP9-201ENST00000417503 FCGBPQ9Y6R7 5405 aaPredicted RBP0.67□□□□□ -2.3
SSXP9-201ENST00000417503 CUBNO60494 3623 aa0.66□□□□□ -2.3
SSXP9-201ENST00000417503 DYNC2H1Q8NCM8 4307 aaKnown RBP0.66□□□□□ -2.3
SSXP9-201ENST00000417503 MT1XP80297 61 aa0.66□□□□□ -2.3
SSXP9-201ENST00000417503 VPS13BQ7Z7G8 4022 aa0.66□□□□□ -2.3
SSXP9-201ENST00000417503 DNAH10Q8IVF4 4471 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms