RNA–Protein interactions for RNA: ENST00000416742.5

LINC00494-201, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best) BASIC

Gene LINC00494, Length 3,544 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-201ENST00000416742 SPATA8Q6RVD6 105 aa5.23□□□□□ -1.57
LINC00494-201ENST00000416742 RPL37P61927 97 aaKnown RBP5.22□□□□□ -1.57
LINC00494-201ENST00000416742 XP32Q5T750 250 aa5.22□□□□□ -1.57
LINC00494-201ENST00000416742 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
LINC00494-201ENST00000416742 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
LINC00494-201ENST00000416742 MT1HL1P0DM35 61 aa5.19□□□□□ -1.58
LINC00494-201ENST00000416742 KTN1-AS1Q86SY8 53 aa5.19□□□□□ -1.58
LINC00494-201ENST00000416742 EPPK1P58107 5090 aaKnown RBP5.16□□□□□ -1.58
LINC00494-201ENST00000416742 LCE2DQ5TA82 110 aaPredicted RBP5.16□□□□□ -1.58
LINC00494-201ENST00000416742 A0A1B0GU33 70 aa5.13□□□□□ -1.59
LINC00494-201ENST00000416742 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
LINC00494-201ENST00000416742 H0YAA0 97 aa5.1□□□□□ -1.59
LINC00494-201ENST00000416742 KRTAP4-5Q9BYR2 181 aa5.09□□□□□ -1.59
LINC00494-201ENST00000416742 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
LINC00494-201ENST00000416742 ADM2Q7Z4H4 148 aa5.07□□□□□ -1.6
LINC00494-201ENST00000416742 S4R3F8 94 aa5.07□□□□□ -1.6
LINC00494-201ENST00000416742 LRP2P98164 4655 aa5.05□□□□□ -1.6
LINC00494-201ENST00000416742 TPRXLQ17RH7 258 aa5.03□□□□□ -1.6
LINC00494-201ENST00000416742 LPAP08519 4548 aa5.02□□□□□ -1.61
LINC00494-201ENST00000416742 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
LINC00494-201ENST00000416742 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
LINC00494-201ENST00000416742 A0A0D9SG42 100 aa4.96□□□□□ -1.62
LINC00494-201ENST00000416742 K7ERS5 55 aa4.95□□□□□ -1.62
LINC00494-201ENST00000416742 P0C880 135 aa4.95□□□□□ -1.62
LINC00494-201ENST00000416742 KRTAP13-4Q3LI77 160 aa4.93□□□□□ -1.62
LINC00494-201ENST00000416742 CSAG1Q6PB30 78 aa4.92□□□□□ -1.62
LINC00494-201ENST00000416742 SEC61BP60468 96 aaKnown RBP4.89□□□□□ -1.63
LINC00494-201ENST00000416742 HERC2O95714 4834 aa4.89□□□□□ -1.63
LINC00494-201ENST00000416742 LINC01554Q52M75 96 aa4.86□□□□□ -1.63
LINC00494-201ENST00000416742 CRIPTQ9P021 101 aa4.85□□□□□ -1.63
LINC00494-201ENST00000416742 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
LINC00494-201ENST00000416742 SPINT4Q6UDR6 99 aa4.81□□□□□ -1.64
LINC00494-201ENST00000416742 ROMO1P60602 79 aa4.79□□□□□ -1.64
LINC00494-201ENST00000416742 MUC17Q685J3 4493 aa4.79□□□□□ -1.64
LINC00494-201ENST00000416742 BIRC6Q9NR09 4857 aa4.78□□□□□ -1.64
LINC00494-201ENST00000416742 KRTAP25-1Q3LHN0 102 aa4.77□□□□□ -1.65
LINC00494-201ENST00000416742 KRTAP12-2P59991 146 aa4.77□□□□□ -1.65
LINC00494-201ENST00000416742 M0QZ58 72 aa4.75□□□□□ -1.65
LINC00494-201ENST00000416742 KRTAP12-1P59990 96 aa4.73□□□□□ -1.65
LINC00494-201ENST00000416742 R4GN34 69 aa4.72□□□□□ -1.65
LINC00494-201ENST00000416742 MUC2Q02817 5179 aa4.68□□□□□ -1.66
LINC00494-201ENST00000416742 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
LINC00494-201ENST00000416742 C10orf95Q9H7T3 257 aa4.66□□□□□ -1.66
LINC00494-201ENST00000416742 HERC1Q15751 4861 aa4.66□□□□□ -1.66
LINC00494-201ENST00000416742 KRTAP19-2Q3LHN2 52 aa4.65□□□□□ -1.66
LINC00494-201ENST00000416742 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
LINC00494-201ENST00000416742 HMCN2Q8NDA2 5059 aa4.58□□□□□ -1.68
LINC00494-201ENST00000416742 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
LINC00494-201ENST00000416742 CAMK2N1Q7Z7J9 78 aa4.5□□□□□ -1.69
LINC00494-201ENST00000416742 FAT4Q6V0I7 4981 aa4.47□□□□□ -1.69
LINC00494-201ENST00000416742 LCE2BO14633 110 aa4.47□□□□□ -1.69
LINC00494-201ENST00000416742 M0R2T5 61 aa4.46□□□□□ -1.69
LINC00494-201ENST00000416742 LCE2CQ5TA81 110 aa4.45□□□□□ -1.7
LINC00494-201ENST00000416742 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
LINC00494-201ENST00000416742 RNF213Q63HN8 5207 aa4.43□□□□□ -1.7
LINC00494-201ENST00000416742 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
LINC00494-201ENST00000416742 MT1HP80294 61 aa4.35□□□□□ -1.71
LINC00494-201ENST00000416742 NDUFAF8A1L188 74 aa4.34□□□□□ -1.71
LINC00494-201ENST00000416742 KRTAP10-10P60014 251 aa4.31□□□□□ -1.72
LINC00494-201ENST00000416742 PLAC4Q8WY50 150 aa4.3□□□□□ -1.72
LINC00494-201ENST00000416742 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
LINC00494-201ENST00000416742 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
LINC00494-201ENST00000416742 LCE2AQ5TA79 106 aaPredicted RBP4.28□□□□□ -1.72
LINC00494-201ENST00000416742 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.73
LINC00494-201ENST00000416742 TNP1P09430 55 aa4.27□□□□□ -1.73
LINC00494-201ENST00000416742 MT2AP02795 61 aa4.26□□□□□ -1.73
LINC00494-201ENST00000416742 MT1FP04733 61 aa4.26□□□□□ -1.73
LINC00494-201ENST00000416742 PP632Q6XCG6 107 aa4.25□□□□□ -1.73
LINC00494-201ENST00000416742 KRTAP9-8Q9BYQ0 159 aa4.23□□□□□ -1.73
LINC00494-201ENST00000416742 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
LINC00494-201ENST00000416742 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
LINC00494-201ENST00000416742 MT1BP07438 61 aa4.08□□□□□ -1.76
LINC00494-201ENST00000416742 LCE3AQ5TA76 89 aa4.06□□□□□ -1.76
LINC00494-201ENST00000416742 KRTAP9-3Q9BYQ3 159 aa4.05□□□□□ -1.76
LINC00494-201ENST00000416742 KRTAP10-5P60370 271 aa4.02□□□□□ -1.77
LINC00494-201ENST00000416742 MT1XP80297 61 aa4.02□□□□□ -1.77
LINC00494-201ENST00000416742 KRTAP10-12P60413 245 aa3.93□□□□□ -1.78
LINC00494-201ENST00000416742 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
LINC00494-201ENST00000416742 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
LINC00494-201ENST00000416742 KRTAP8-1Q8IUC2 63 aa3.91□□□□□ -1.78
LINC00494-201ENST00000416742 USH2AO75445 5202 aa3.9□□□□□ -1.79
LINC00494-201ENST00000416742 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
LINC00494-201ENST00000416742 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
LINC00494-201ENST00000416742 KMT2DO14686 5537 aa3.78□□□□□ -1.8
LINC00494-201ENST00000416742 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
LINC00494-201ENST00000416742 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
LINC00494-201ENST00000416742 KRTAP4-8Q9BYQ9 185 aa3.74□□□□□ -1.81
LINC00494-201ENST00000416742 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
LINC00494-201ENST00000416742 SSPOA2VEC9 5147 aa3.63□□□□□ -1.83
LINC00494-201ENST00000416742 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
LINC00494-201ENST00000416742 KRTAP19-7Q3SYF9 63 aa3.58□□□□□ -1.84
LINC00494-201ENST00000416742 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
LINC00494-201ENST00000416742 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
LINC00494-201ENST00000416742 MT1EP04732 61 aa3.49□□□□□ -1.85
LINC00494-201ENST00000416742 MT1LQ93083 61 aa3.47□□□□□ -1.85
LINC00494-201ENST00000416742 KRTAP9-6A8MVA2 160 aa3.47□□□□□ -1.85
LINC00494-201ENST00000416742 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
LINC00494-201ENST00000416742 MUC12Q9UKN1 5478 aa3.38□□□□□ -1.87
LINC00494-201ENST00000416742 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
LINC00494-201ENST00000416742 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms