RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
PAF1-202ENST00000416728 Q5W150 140 aa6.69□□□□□ -1.34
PAF1-202ENST00000416728 CYSTM1Q9H1C7 97 aa6.69□□□□□ -1.34
PAF1-202ENST00000416728 BPY2O14599 106 aa6.68□□□□□ -1.34
PAF1-202ENST00000416728 SMIM26A0A096LP01 95 aa6.67□□□□□ -1.34
PAF1-202ENST00000416728 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
PAF1-202ENST00000416728 TRAV7A0A075B6U4 112 aa6.62□□□□□ -1.35
PAF1-202ENST00000416728 HCG22E2RYF7 251 aa6.62□□□□□ -1.35
PAF1-202ENST00000416728 NDUFC1O43677 76 aa6.62□□□□□ -1.35
PAF1-202ENST00000416728 KLKP1Q107X0 134 aa6.61□□□□□ -1.35
PAF1-202ENST00000416728 Q8N9L7 120 aa6.61□□□□□ -1.35
PAF1-202ENST00000416728 H7BZZ5 65 aa6.59□□□□□ -1.35
PAF1-202ENST00000416728 V9GYY9 64 aa6.59□□□□□ -1.35
PAF1-202ENST00000416728 CXCL6P80162 114 aa6.58□□□□□ -1.36
PAF1-202ENST00000416728 A0A087WVE0 104 aa6.57□□□□□ -1.36
PAF1-202ENST00000416728 A6NN06 94 aa6.57□□□□□ -1.36
PAF1-202ENST00000416728 SEC61GP60059 68 aa6.57□□□□□ -1.36
PAF1-202ENST00000416728 C20orf197Q8N268 126 aa6.56□□□□□ -1.36
PAF1-202ENST00000416728 UBL5Q9BZL1 73 aa6.54□□□□□ -1.36
PAF1-202ENST00000416728 Q5VV11 94 aa6.53□□□□□ -1.36
PAF1-202ENST00000416728 S4R3F8 94 aa6.53□□□□□ -1.36
PAF1-202ENST00000416728 NEBP20929 6669 aa6.53□□□□□ -1.36
PAF1-202ENST00000416728 MT1BP07438 61 aa6.52□□□□□ -1.37
PAF1-202ENST00000416728 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
PAF1-202ENST00000416728 KRTAP3-1Q9BYR8 98 aa6.51□□□□□ -1.37
PAF1-202ENST00000416728 C1orf64Q8NEQ6 169 aa6.49□□□□□ -1.37
PAF1-202ENST00000416728 SPRR2GQ9BYE4 73 aa6.49□□□□□ -1.37
PAF1-202ENST00000416728 KRTAP19-8Q3LI54 63 aa6.48□□□□□ -1.37
PAF1-202ENST00000416728 LCA10Q71F78 164 aa6.47□□□□□ -1.37
PAF1-202ENST00000416728 BRK1Q8WUW1 75 aa6.45□□□□□ -1.38
PAF1-202ENST00000416728 MUC12Q9UKN1 5478 aa6.44□□□□□ -1.38
PAF1-202ENST00000416728 KRTAP10-5P60370 271 aa6.43□□□□□ -1.38
PAF1-202ENST00000416728 TP53AIP1Q9HCN2 124 aa6.4□□□□□ -1.39
PAF1-202ENST00000416728 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
PAF1-202ENST00000416728 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
PAF1-202ENST00000416728 Q1T7F1 81 aa6.34□□□□□ -1.39
PAF1-202ENST00000416728 KRTAP20-1Q3LI63 56 aa6.34□□□□□ -1.39
PAF1-202ENST00000416728 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
PAF1-202ENST00000416728 CRIPTQ9P021 101 aa6.31□□□□□ -1.4
PAF1-202ENST00000416728 OCR1Q9BZK8 76 aa6.3□□□□□ -1.4
PAF1-202ENST00000416728 CYP4F30PQ9H0H9 118 aa6.3□□□□□ -1.4
PAF1-202ENST00000416728 KMT2DO14686 5537 aa6.27□□□□□ -1.41
PAF1-202ENST00000416728 MDN1Q9NU22 5596 aa6.24□□□□□ -1.41
PAF1-202ENST00000416728 TRAV22A0A0B4J277 110 aa6.23□□□□□ -1.41
PAF1-202ENST00000416728 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
PAF1-202ENST00000416728 KTN1-AS1Q86SY8 53 aa6.18□□□□□ -1.42
PAF1-202ENST00000416728 LOC100996750A0A140TA64 210 aa6.18□□□□□ -1.42
PAF1-202ENST00000416728 H0YAA0 97 aa6.18□□□□□ -1.42
PAF1-202ENST00000416728 KRTAP4-6Q9BYQ5 205 aa6.18□□□□□ -1.42
PAF1-202ENST00000416728 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
PAF1-202ENST00000416728 A8MUN3 132 aa6.12□□□□□ -1.43
PAF1-202ENST00000416728 KRTAP2-3P0C7H8 128 aa6.12□□□□□ -1.43
PAF1-202ENST00000416728 KRTAP2-4Q9BYR9 128 aa6.12□□□□□ -1.43
PAF1-202ENST00000416728 ADM2Q7Z4H4 148 aa6.11□□□□□ -1.43
PAF1-202ENST00000416728 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
PAF1-202ENST00000416728 SPRR2FQ96RM1 72 aa6.11□□□□□ -1.43
PAF1-202ENST00000416728 H0Y9P7 68 aa6.1□□□□□ -1.43
PAF1-202ENST00000416728 H3BPC8 53 aa6.09□□□□□ -1.43
PAF1-202ENST00000416728 PSPHP1O15172 72 aa6.07□□□□□ -1.44
PAF1-202ENST00000416728 SPRR2EP22531 72 aa6.07□□□□□ -1.44
PAF1-202ENST00000416728 SPRR2BP35325 72 aa6.07□□□□□ -1.44
PAF1-202ENST00000416728 SPRR2AP35326 72 aa6.07□□□□□ -1.44
PAF1-202ENST00000416728 MT1XP80297 61 aa6.06□□□□□ -1.44
PAF1-202ENST00000416728 PLAC4Q8WY50 150 aa6.05□□□□□ -1.44
PAF1-202ENST00000416728 MP68P56378 58 aa6.03□□□□□ -1.44
PAF1-202ENST00000416728 KRTAP8-1Q8IUC2 63 aa6.02□□□□□ -1.45
PAF1-202ENST00000416728 LINC00208Q96KT6 92 aa6.02□□□□□ -1.45
PAF1-202ENST00000416728 CHKB-CPT1BH3BT56 60 aa6.01□□□□□ -1.45
PAF1-202ENST00000416728 CDC42SE1Q9NRR8 79 aa6.01□□□□□ -1.45
PAF1-202ENST00000416728 R4GN34 69 aa5.99□□□□□ -1.45
PAF1-202ENST00000416728 PRR15LQ9BU68 103 aa5.97□□□□□ -1.45
PAF1-202ENST00000416728 KRTAP12-2P59991 146 aa5.96□□□□□ -1.45
PAF1-202ENST00000416728 LCE1AQ5T7P2 110 aa5.95□□□□□ -1.46
PAF1-202ENST00000416728 A6NED7 52 aa5.93□□□□□ -1.46
PAF1-202ENST00000416728 P0C880 135 aa5.93□□□□□ -1.46
PAF1-202ENST00000416728 M0QZ58 72 aa5.93□□□□□ -1.46
PAF1-202ENST00000416728 LINC01558Q9Y6Z2 57 aa5.93□□□□□ -1.46
PAF1-202ENST00000416728 SPTSSBQ8NFR3 76 aa5.92□□□□□ -1.46
PAF1-202ENST00000416728 KRTAP2-2Q9BYT5 123 aa5.91□□□□□ -1.46
PAF1-202ENST00000416728 KRTAP2-1Q9BYU5 128 aa5.91□□□□□ -1.46
PAF1-202ENST00000416728 A8MU10 97 aa5.9□□□□□ -1.47
PAF1-202ENST00000416728 COA5Q86WW8 74 aa5.88□□□□□ -1.47
PAF1-202ENST00000416728 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
PAF1-202ENST00000416728 SPRR2DP22532 72 aa5.87□□□□□ -1.47
PAF1-202ENST00000416728 LINC01554Q52M75 96 aa5.87□□□□□ -1.47
PAF1-202ENST00000416728 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
PAF1-202ENST00000416728 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
PAF1-202ENST00000416728 KRTAP10-7P60409 375 aaPredicted RBP5.79□□□□□ -1.48
PAF1-202ENST00000416728 KRTAP10-12P60413 245 aa5.76□□□□□ -1.49
PAF1-202ENST00000416728 LCE3BQ5TA77 95 aa5.73□□□□□ -1.49
PAF1-202ENST00000416728 H3BS24 57 aa5.7□□□□□ -1.5
PAF1-202ENST00000416728 ACYP2P14621 99 aa5.65□□□□□ -1.51
PAF1-202ENST00000416728 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
PAF1-202ENST00000416728 PRAC1Q96KF2 57 aa5.62□□□□□ -1.51
PAF1-202ENST00000416728 UQCR11O14957 56 aa5.54□□□□□ -1.52
PAF1-202ENST00000416728 A0A1B0GU69 56 aa5.53□□□□□ -1.52
PAF1-202ENST00000416728 MIR22HGQ0VDD5 57 aa5.52□□□□□ -1.53
PAF1-202ENST00000416728 CAMK2N1Q7Z7J9 78 aa5.48□□□□□ -1.53
PAF1-202ENST00000416728 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
PAF1-202ENST00000416728 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms