RNA–Protein interactions for RNA: ENST00000416081.5

SSFA2-204, Transcript of Sperm-specific antigen 2, humanhuman

TSL 1 (best)

Gene SSFA2, Length 5,067 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSFA2-204ENST00000416081 TPRXLQ17RH7 258 aa3.84□□□□□ -1.8
SSFA2-204ENST00000416081 DNAH17Q9UFH2 4485 aa3.82□□□□□ -1.8
SSFA2-204ENST00000416081 FAT2Q9NYQ8 4349 aa3.82□□□□□ -1.8
SSFA2-204ENST00000416081 PKD1P98161 4303 aa3.79□□□□□ -1.8
SSFA2-204ENST00000416081 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.8
SSFA2-204ENST00000416081 KRTAP15-1Q3LI76 137 aa3.77□□□□□ -1.81
SSFA2-204ENST00000416081 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
SSFA2-204ENST00000416081 PKHD1P08F94 4074 aa3.77□□□□□ -1.81
SSFA2-204ENST00000416081 DNAH11Q96DT5 4516 aa3.77□□□□□ -1.81
SSFA2-204ENST00000416081 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
SSFA2-204ENST00000416081 DNAH5Q8TE73 4624 aa3.73□□□□□ -1.81
SSFA2-204ENST00000416081 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
SSFA2-204ENST00000416081 M0QZ58 72 aa3.71□□□□□ -1.82
SSFA2-204ENST00000416081 KRTAP3-2Q9BYR7 98 aa3.71□□□□□ -1.82
SSFA2-204ENST00000416081 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
SSFA2-204ENST00000416081 KRTAP3-3Q9BYR6 98 aa3.7□□□□□ -1.82
SSFA2-204ENST00000416081 LRP1BQ9NZR2 4599 aa3.68□□□□□ -1.82
SSFA2-204ENST00000416081 KRTAP12-1P59990 96 aa3.68□□□□□ -1.82
SSFA2-204ENST00000416081 RYR3Q15413 4870 aa3.66□□□□□ -1.82
SSFA2-204ENST00000416081 XP32Q5T750 250 aa3.65□□□□□ -1.82
SSFA2-204ENST00000416081 KRTAP10-8P60410 259 aa3.62□□□□□ -1.83
SSFA2-204ENST00000416081 VPS13BQ7Z7G8 4022 aa3.61□□□□□ -1.83
SSFA2-204ENST00000416081 RYR2Q92736 4967 aa3.59□□□□□ -1.84
SSFA2-204ENST00000416081 KRTAP10-4P60372 401 aaPredicted RBP3.54□□□□□ -1.84
SSFA2-204ENST00000416081 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
SSFA2-204ENST00000416081 FAT1Q14517 4588 aa3.51□□□□□ -1.85
SSFA2-204ENST00000416081 APOBP04114 4563 aaKnown RBP3.51□□□□□ -1.85
SSFA2-204ENST00000416081 EPPK1P58107 5090 aaKnown RBP3.5□□□□□ -1.85
SSFA2-204ENST00000416081 A0A1B0GVY2 172 aa3.5□□□□□ -1.85
SSFA2-204ENST00000416081 DYNC1H1Q14204 4646 aaKnown RBP3.5□□□□□ -1.85
SSFA2-204ENST00000416081 PKHD1L1Q86WI1 4243 aa3.49□□□□□ -1.85
SSFA2-204ENST00000416081 TNP1P09430 55 aa3.48□□□□□ -1.85
SSFA2-204ENST00000416081 LRP1Q07954 4544 aaKnown RBP3.44□□□□□ -1.86
SSFA2-204ENST00000416081 MYCBP2O75592 4640 aa3.43□□□□□ -1.86
SSFA2-204ENST00000416081 HSPG2P98160 4391 aa3.42□□□□□ -1.86
SSFA2-204ENST00000416081 KIAA1109Q2LD37 5005 aa3.39□□□□□ -1.87
SSFA2-204ENST00000416081 FAT3Q8TDW7 4589 aa3.38□□□□□ -1.87
SSFA2-204ENST00000416081 KRTAP17-1Q9BYP8 105 aa3.37□□□□□ -1.87
SSFA2-204ENST00000416081 TNXBP22105 4242 aa3.37□□□□□ -1.87
SSFA2-204ENST00000416081 ABCA13Q86UQ4 5058 aa3.36□□□□□ -1.87
SSFA2-204ENST00000416081 PRO2289Q9P1D8 64 aa3.35□□□□□ -1.87
SSFA2-204ENST00000416081 RYR1P21817 5038 aa3.33□□□□□ -1.88
SSFA2-204ENST00000416081 LPAP08519 4548 aa3.32□□□□□ -1.88
SSFA2-204ENST00000416081 LORP23490 312 aaPredicted RBP3.31□□□□□ -1.88
SSFA2-204ENST00000416081 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
SSFA2-204ENST00000416081 MT1HL1P0DM35 61 aa3.3□□□□□ -1.88
SSFA2-204ENST00000416081 PCLOQ9Y6V0 5065 aa3.25□□□□□ -1.89
SSFA2-204ENST00000416081 KRTAP23-1A1A580 65 aa3.25□□□□□ -1.89
SSFA2-204ENST00000416081 MUC2Q02817 5179 aa3.19□□□□□ -1.9
SSFA2-204ENST00000416081 LRP2P98164 4655 aa3.18□□□□□ -1.9
SSFA2-204ENST00000416081 HERC1Q15751 4861 aa3.17□□□□□ -1.9
SSFA2-204ENST00000416081 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
SSFA2-204ENST00000416081 INE1O15225 51 aa3.15□□□□□ -1.91
SSFA2-204ENST00000416081 HERC2O95714 4834 aa3.13□□□□□ -1.91
SSFA2-204ENST00000416081 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
SSFA2-204ENST00000416081 BIRC6Q9NR09 4857 aa3.06□□□□□ -1.92
SSFA2-204ENST00000416081 KRTAP4-5Q9BYR2 181 aa3.05□□□□□ -1.92
SSFA2-204ENST00000416081 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
SSFA2-204ENST00000416081 MUC17Q685J3 4493 aa3.04□□□□□ -1.92
SSFA2-204ENST00000416081 RNF213Q63HN8 5207 aa3.02□□□□□ -1.93
SSFA2-204ENST00000416081 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
SSFA2-204ENST00000416081 FAT4Q6V0I7 4981 aa3□□□□□ -1.93
SSFA2-204ENST00000416081 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
SSFA2-204ENST00000416081 KRTAP19-2Q3LHN2 52 aa2.99□□□□□ -1.93
SSFA2-204ENST00000416081 SPRR2GQ9BYE4 73 aa2.95□□□□□ -1.94
SSFA2-204ENST00000416081 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
SSFA2-204ENST00000416081 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
SSFA2-204ENST00000416081 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
SSFA2-204ENST00000416081 KRTAP8-1Q8IUC2 63 aa2.92□□□□□ -1.94
SSFA2-204ENST00000416081 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
SSFA2-204ENST00000416081 KRTAP19-1Q8IUB9 90 aa2.88□□□□□ -1.95
SSFA2-204ENST00000416081 MT2AP02795 61 aa2.78□□□□□ -1.96
SSFA2-204ENST00000416081 MT1FP04733 61 aa2.78□□□□□ -1.96
SSFA2-204ENST00000416081 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
SSFA2-204ENST00000416081 MT1HP80294 61 aa2.76□□□□□ -1.97
SSFA2-204ENST00000416081 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
SSFA2-204ENST00000416081 KRTAP10-5P60370 271 aa2.76□□□□□ -1.97
SSFA2-204ENST00000416081 MT1XP80297 61 aa2.76□□□□□ -1.97
SSFA2-204ENST00000416081 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
SSFA2-204ENST00000416081 KRTAP10-7P60409 375 aaPredicted RBP2.72□□□□□ -1.97
SSFA2-204ENST00000416081 MT1BP07438 61 aa2.71□□□□□ -1.98
SSFA2-204ENST00000416081 KRTAP19-5Q3LI72 72 aa2.69□□□□□ -1.98
SSFA2-204ENST00000416081 LCE2DQ5TA82 110 aaPredicted RBP2.69□□□□□ -1.98
SSFA2-204ENST00000416081 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
SSFA2-204ENST00000416081 USH2AO75445 5202 aa2.65□□□□□ -1.99
SSFA2-204ENST00000416081 KRTAP9-3Q9BYQ3 159 aa2.57□□□□□ -2
SSFA2-204ENST00000416081 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
SSFA2-204ENST00000416081 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
SSFA2-204ENST00000416081 KRTAP2-1Q9BYU5 128 aa2.56□□□□□ -2
SSFA2-204ENST00000416081 KRTAP19-4Q3LI73 84 aa2.54□□□□□ -2
SSFA2-204ENST00000416081 KRTAP9-2Q9BYQ4 174 aa2.54□□□□□ -2
SSFA2-204ENST00000416081 KRTAP9-6A8MVA2 160 aa2.52□□□□□ -2.01
SSFA2-204ENST00000416081 KRTAP9-6A0A140TA67 174 aa2.52□□□□□ -2.01
SSFA2-204ENST00000416081 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
SSFA2-204ENST00000416081 KRTAP4-8Q9BYQ9 185 aa2.49□□□□□ -2.01
SSFA2-204ENST00000416081 KRTAP4-7Q9BYR0 210 aa2.48□□□□□ -2.01
SSFA2-204ENST00000416081 KMT2DO14686 5537 aa2.47□□□□□ -2.01
SSFA2-204ENST00000416081 SPRR2FQ96RM1 72 aa2.44□□□□□ -2.02
SSFA2-204ENST00000416081 KRTAP19-7Q3SYF9 63 aa2.42□□□□□ -2.02
SSFA2-204ENST00000416081 MT1LQ93083 61 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms