RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NDUFS5O43920 106 aa4.72□□□□□ -1.65
RFFL-203ENST00000413582 MPLKIPQ8TAP9 179 aa4.72□□□□□ -1.65
RFFL-203ENST00000413582 SERP2Q8N6R1 65 aa4.71□□□□□ -1.66
RFFL-203ENST00000413582 NEBP20929 6669 aa4.71□□□□□ -1.66
RFFL-203ENST00000413582 HRES1P13985 223 aa4.69□□□□□ -1.66
RFFL-203ENST00000413582 COX7CP15954 63 aa4.69□□□□□ -1.66
RFFL-203ENST00000413582 TRAV22A0A0B4J277 110 aa4.68□□□□□ -1.66
RFFL-203ENST00000413582 H3BPC8 53 aa4.68□□□□□ -1.66
RFFL-203ENST00000413582 ZCCHC13Q8WW36 166 aaKnown RBP4.68□□□□□ -1.66
RFFL-203ENST00000413582 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
RFFL-203ENST00000413582 MP68P56378 58 aa4.66□□□□□ -1.66
RFFL-203ENST00000413582 RPS28P62857 69 aaKnown RBP4.66□□□□□ -1.66
RFFL-203ENST00000413582 Q5W150 140 aa4.64□□□□□ -1.67
RFFL-203ENST00000413582 H0Y9P7 68 aa4.63□□□□□ -1.67
RFFL-203ENST00000413582 LOC101927531A0A1B0GV80 90 aa4.62□□□□□ -1.67
RFFL-203ENST00000413582 KLKP1Q107X0 134 aa4.61□□□□□ -1.67
RFFL-203ENST00000413582 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
RFFL-203ENST00000413582 NDUFC1O43677 76 aa4.6□□□□□ -1.67
RFFL-203ENST00000413582 IGKV2-30P06310 120 aa4.6□□□□□ -1.67
RFFL-203ENST00000413582 C1orf64Q8NEQ6 169 aa4.6□□□□□ -1.67
RFFL-203ENST00000413582 LINC00208Q96KT6 92 aa4.6□□□□□ -1.67
RFFL-203ENST00000413582 CCDC179H3BU77 68 aa4.59□□□□□ -1.67
RFFL-203ENST00000413582 PMAIP1Q13794 54 aa4.59□□□□□ -1.67
RFFL-203ENST00000413582 C7orf65Q6ZTY9 151 aa4.59□□□□□ -1.67
RFFL-203ENST00000413582 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
RFFL-203ENST00000413582 C20orf197Q8N268 126 aa4.57□□□□□ -1.68
RFFL-203ENST00000413582 CYP4F30PQ9H0H9 118 aa4.57□□□□□ -1.68
RFFL-203ENST00000413582 SPINK7P58062 85 aa4.56□□□□□ -1.68
RFFL-203ENST00000413582 IGKV2D-30A0A075B6S6 120 aa4.54□□□□□ -1.68
RFFL-203ENST00000413582 SNURFQ9Y675 71 aa4.53□□□□□ -1.68
RFFL-203ENST00000413582 H7BZZ5 65 aa4.51□□□□□ -1.69
RFFL-203ENST00000413582 TMEM258P61165 79 aa4.51□□□□□ -1.69
RFFL-203ENST00000413582 ATP5EP56381 51 aaPredicted RBP4.49□□□□□ -1.69
RFFL-203ENST00000413582 SPANXA2-OT1Q8N9U9 137 aa4.49□□□□□ -1.69
RFFL-203ENST00000413582 A8MUN3 132 aa4.46□□□□□ -1.7
RFFL-203ENST00000413582 KRTAP15-1Q3LI76 137 aa4.46□□□□□ -1.7
RFFL-203ENST00000413582 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
RFFL-203ENST00000413582 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
RFFL-203ENST00000413582 KMT2DO14686 5537 aa4.44□□□□□ -1.7
RFFL-203ENST00000413582 A6NN06 94 aa4.43□□□□□ -1.7
RFFL-203ENST00000413582 KRTAP5-9P26371 169 aa4.43□□□□□ -1.7
RFFL-203ENST00000413582 DMAC1Q96GE9 116 aa4.41□□□□□ -1.7
RFFL-203ENST00000413582 ACYP2P14621 99 aa4.4□□□□□ -1.71
RFFL-203ENST00000413582 LCE4AQ5TA78 99 aa4.39□□□□□ -1.71
RFFL-203ENST00000413582 MT1BP07438 61 aa4.38□□□□□ -1.71
RFFL-203ENST00000413582 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
RFFL-203ENST00000413582 SERP1Q9Y6X1 66 aa4.37□□□□□ -1.71
RFFL-203ENST00000413582 LOC100996750A0A140TA64 210 aa4.36□□□□□ -1.71
RFFL-203ENST00000413582 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
RFFL-203ENST00000413582 KRTAP2-3P0C7H8 128 aa4.34□□□□□ -1.71
RFFL-203ENST00000413582 KRTAP10-5P60370 271 aa4.34□□□□□ -1.71
RFFL-203ENST00000413582 BRK1Q8WUW1 75 aa4.34□□□□□ -1.71
RFFL-203ENST00000413582 KRTAP2-4Q9BYR9 128 aa4.34□□□□□ -1.71
RFFL-203ENST00000413582 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
RFFL-203ENST00000413582 Q5VV11 94 aa4.32□□□□□ -1.72
RFFL-203ENST00000413582 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
RFFL-203ENST00000413582 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
RFFL-203ENST00000413582 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
RFFL-203ENST00000413582 SMIM26A0A096LP01 95 aa4.3□□□□□ -1.72
RFFL-203ENST00000413582 PSPHP1O15172 72 aa4.29□□□□□ -1.72
RFFL-203ENST00000413582 COA5Q86WW8 74 aa4.29□□□□□ -1.72
RFFL-203ENST00000413582 SPTSSBQ8NFR3 76 aa4.29□□□□□ -1.72
RFFL-203ENST00000413582 S4R3F8 94 aa4.29□□□□□ -1.72
RFFL-203ENST00000413582 CHKB-CPT1BH3BT56 60 aa4.28□□□□□ -1.72
RFFL-203ENST00000413582 SPRR2GQ9BYE4 73 aa4.27□□□□□ -1.73
RFFL-203ENST00000413582 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
RFFL-203ENST00000413582 LCA10Q71F78 164 aa4.26□□□□□ -1.73
RFFL-203ENST00000413582 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
RFFL-203ENST00000413582 CSAG1Q6PB30 78 aa4.25□□□□□ -1.73
RFFL-203ENST00000413582 KRTAP4-8Q9BYQ9 185 aa4.25□□□□□ -1.73
RFFL-203ENST00000413582 SPRR2EP22531 72 aa4.22□□□□□ -1.73
RFFL-203ENST00000413582 SPRR2BP35325 72 aa4.22□□□□□ -1.73
RFFL-203ENST00000413582 SPRR2AP35326 72 aa4.22□□□□□ -1.73
RFFL-203ENST00000413582 Q1T7F1 81 aa4.21□□□□□ -1.74
RFFL-203ENST00000413582 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
RFFL-203ENST00000413582 KRTAP2-2Q9BYT5 123 aa4.19□□□□□ -1.74
RFFL-203ENST00000413582 KRTAP2-1Q9BYU5 128 aa4.19□□□□□ -1.74
RFFL-203ENST00000413582 H0YAA0 97 aa4.18□□□□□ -1.74
RFFL-203ENST00000413582 LINC01558Q9Y6Z2 57 aa4.14□□□□□ -1.75
RFFL-203ENST00000413582 LCE1AQ5T7P2 110 aa4.13□□□□□ -1.75
RFFL-203ENST00000413582 LINC01554Q52M75 96 aa4.11□□□□□ -1.75
RFFL-203ENST00000413582 PRR15LQ9BU68 103 aa4.1□□□□□ -1.75
RFFL-203ENST00000413582 A0A1B0GU69 56 aa4.08□□□□□ -1.76
RFFL-203ENST00000413582 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
RFFL-203ENST00000413582 ADM2Q7Z4H4 148 aa4.08□□□□□ -1.76
RFFL-203ENST00000413582 GPR98Q8WXG9 6306 aa4.07□□□□□ -1.76
RFFL-203ENST00000413582 SPRR2DP22532 72 aa4.07□□□□□ -1.76
RFFL-203ENST00000413582 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
RFFL-203ENST00000413582 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
RFFL-203ENST00000413582 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
RFFL-203ENST00000413582 P0C880 135 aa4.02□□□□□ -1.77
RFFL-203ENST00000413582 MT1XP80297 61 aa4.02□□□□□ -1.77
RFFL-203ENST00000413582 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
RFFL-203ENST00000413582 A0A1B0GU33 70 aa4□□□□□ -1.77
RFFL-203ENST00000413582 M0QZ58 72 aa4□□□□□ -1.77
RFFL-203ENST00000413582 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
RFFL-203ENST00000413582 UQCR11O14957 56 aa3.97□□□□□ -1.77
RFFL-203ENST00000413582 R4GN34 69 aa3.97□□□□□ -1.77
RFFL-203ENST00000413582 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
RFFL-203ENST00000413582 K7ERS5 55 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms