RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 DMAC1Q96GE9 116 aa14.47□□□□□ -0.09
CSNK1E-206ENST00000413574 KRTAP10-10P60014 251 aa14.43□□□□□ -0.1
CSNK1E-206ENST00000413574 LCE2DQ5TA82 110 aaPredicted RBP14.43□□□□□ -0.1
CSNK1E-206ENST00000413574 ANAPC13Q9BS18 74 aa14.39□□□□□ -0.11
CSNK1E-206ENST00000413574 NDUFC1O43677 76 aa14.33□□□□□ -0.11
CSNK1E-206ENST00000413574 CYSTM1Q9H1C7 97 aa14.26□□□□□ -0.13
CSNK1E-206ENST00000413574 SPANXA2-OT1Q8N9U9 137 aa14.25□□□□□ -0.13
CSNK1E-206ENST00000413574 ACYP2P14621 99 aa14.24□□□□□ -0.13
CSNK1E-206ENST00000413574 KRTAP9-3Q9BYQ3 159 aa14.23□□□□□ -0.13
CSNK1E-206ENST00000413574 CCDC179H3BU77 68 aa14.13□□□□□ -0.15
CSNK1E-206ENST00000413574 H7BZZ5 65 aa14.13□□□□□ -0.15
CSNK1E-206ENST00000413574 FSIP2Q5CZC0 6907 aa14.07□□□□□ -0.16
CSNK1E-206ENST00000413574 LCE2BO14633 110 aa14.03□□□□□ -0.16
CSNK1E-206ENST00000413574 USH2AO75445 5202 aa14.01□□□□□ -0.17
CSNK1E-206ENST00000413574 CHKB-CPT1BH3BT56 60 aa14□□□□□ -0.17
CSNK1E-206ENST00000413574 H0YAA0 97 aa13.97□□□□□ -0.17
CSNK1E-206ENST00000413574 ADM2Q7Z4H4 148 aa13.95□□□□□ -0.18
CSNK1E-206ENST00000413574 COA5Q86WW8 74 aa13.87□□□□□ -0.19
CSNK1E-206ENST00000413574 SPTSSBQ8NFR3 76 aa13.87□□□□□ -0.19
CSNK1E-206ENST00000413574 KRTAP19-1Q8IUB9 90 aa13.86□□□□□ -0.19
CSNK1E-206ENST00000413574 CRCT1Q9UGL9 99 aa13.79□□□□□ -0.2
CSNK1E-206ENST00000413574 P0C880 135 aa13.76□□□□□ -0.21
CSNK1E-206ENST00000413574 SSPOA2VEC9 5147 aa13.75□□□□□ -0.21
CSNK1E-206ENST00000413574 SPRR2GQ9BYE4 73 aa13.75□□□□□ -0.21
CSNK1E-206ENST00000413574 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
CSNK1E-206ENST00000413574 KRTAP9-6A0A140TA67 174 aa13.72□□□□□ -0.21
CSNK1E-206ENST00000413574 CRIPTQ9P021 101 aa13.72□□□□□ -0.21
CSNK1E-206ENST00000413574 ATP5EP56381 51 aaPredicted RBP13.58□□□□□ -0.24
CSNK1E-206ENST00000413574 TMEM258P61165 79 aa13.54□□□□□ -0.24
CSNK1E-206ENST00000413574 KRTAP19-8Q3LI54 63 aa13.53□□□□□ -0.24
CSNK1E-206ENST00000413574 R4GN34 69 aa13.5□□□□□ -0.25
CSNK1E-206ENST00000413574 MT1BP07438 61 aa13.49□□□□□ -0.25
CSNK1E-206ENST00000413574 Q5VV11 94 aa13.47□□□□□ -0.25
CSNK1E-206ENST00000413574 M0QZ58 72 aa13.45□□□□□ -0.26
CSNK1E-206ENST00000413574 KRTAP19-6Q3LI70 58 aa13.35□□□□□ -0.27
CSNK1E-206ENST00000413574 PCP4P48539 62 aa13.31□□□□□ -0.28
CSNK1E-206ENST00000413574 FCGBPQ9Y6R7 5405 aaPredicted RBP13.3□□□□□ -0.28
CSNK1E-206ENST00000413574 SEC61GP60059 68 aa13.28□□□□□ -0.28
CSNK1E-206ENST00000413574 SERP1Q9Y6X1 66 aa13.26□□□□□ -0.29
CSNK1E-206ENST00000413574 LINC01554Q52M75 96 aa13.25□□□□□ -0.29
CSNK1E-206ENST00000413574 KRTAP13-4Q3LI77 160 aa13.17□□□□□ -0.3
CSNK1E-206ENST00000413574 A0A1B0GU69 56 aa13.12□□□□□ -0.31
CSNK1E-206ENST00000413574 PLAC4Q8WY50 150 aa13.06□□□□□ -0.32
CSNK1E-206ENST00000413574 A0A1B0GU33 70 aa13.03□□□□□ -0.32
CSNK1E-206ENST00000413574 A6NN06 94 aa13.02□□□□□ -0.33
CSNK1E-206ENST00000413574 KRTAP10-5P60370 271 aa12.99□□□□□ -0.33
CSNK1E-206ENST00000413574 LINC01558Q9Y6Z2 57 aa12.99□□□□□ -0.33
CSNK1E-206ENST00000413574 SPATA8Q6RVD6 105 aa12.96□□□□□ -0.33
CSNK1E-206ENST00000413574 PRR15LQ9BU68 103 aa12.88□□□□□ -0.35
CSNK1E-206ENST00000413574 A0A0D9SG42 100 aa12.84□□□□□ -0.35
CSNK1E-206ENST00000413574 MT1XP80297 61 aa12.83□□□□□ -0.36
CSNK1E-206ENST00000413574 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.81□□□□□ -0.36
CSNK1E-206ENST00000413574 MACF1Q9UPN3 7388 aaKnown RBP12.76□□□□□ -0.37
CSNK1E-206ENST00000413574 PRO2289Q9P1D8 64 aa12.73□□□□□ -0.37
CSNK1E-206ENST00000413574 A8MU10 97 aa12.65□□□□□ -0.38
CSNK1E-206ENST00000413574 SMIM26A0A096LP01 95 aa12.63□□□□□ -0.39
CSNK1E-206ENST00000413574 Q1T7F1 81 aa12.63□□□□□ -0.39
CSNK1E-206ENST00000413574 RPS28P62857 69 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-206ENST00000413574 V9GYY9 64 aa12.62□□□□□ -0.39
CSNK1E-206ENST00000413574 SPINT4Q6UDR6 99 aa12.58□□□□□ -0.4
CSNK1E-206ENST00000413574 PSPHP1O15172 72 aa12.56□□□□□ -0.4
CSNK1E-206ENST00000413574 KRTAP12-1P59990 96 aa12.56□□□□□ -0.4
CSNK1E-206ENST00000413574 CAMK2N1Q7Z7J9 78 aa12.52□□□□□ -0.4
CSNK1E-206ENST00000413574 SYNE2Q8WXH0 6885 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-206ENST00000413574 UQCR11O14957 56 aa12.51□□□□□ -0.41
CSNK1E-206ENST00000413574 KRTAP12-2P59991 146 aa12.51□□□□□ -0.41
CSNK1E-206ENST00000413574 KRTAP9-7A8MTY7 169 aa12.43□□□□□ -0.42
CSNK1E-206ENST00000413574 KMT2DO14686 5537 aa12.34□□□□□ -0.43
CSNK1E-206ENST00000413574 MIR22HGQ0VDD5 57 aa12.32□□□□□ -0.44
CSNK1E-206ENST00000413574 KRTAP10-7P60409 375 aaPredicted RBP12.29□□□□□ -0.44
CSNK1E-206ENST00000413574 KRTAP6-3Q3LI67 103 aa12.18□□□□□ -0.46
CSNK1E-206ENST00000413574 KRTAP10-12P60413 245 aa12.16□□□□□ -0.46
CSNK1E-206ENST00000413574 A6NED7 52 aa12.14□□□□□ -0.47
CSNK1E-206ENST00000413574 KRTAP4-8A0A0G2JLE6 195 aa12.1□□□□□ -0.47
CSNK1E-206ENST00000413574 KRTAP4-8Q9BYQ9 185 aa12.1□□□□□ -0.47
CSNK1E-206ENST00000413574 KRTAP8-1Q8IUC2 63 aa11.98□□□□□ -0.49
CSNK1E-206ENST00000413574 C10orf95Q9H7T3 257 aa11.97□□□□□ -0.49
CSNK1E-206ENST00000413574 KRTAP5-9P26371 169 aa11.93□□□□□ -0.5
CSNK1E-206ENST00000413574 MUC12Q9UKN1 5478 aa11.91□□□□□ -0.5
CSNK1E-206ENST00000413574 K7ERS5 55 aa11.87□□□□□ -0.51
CSNK1E-206ENST00000413574 SPRR2FQ96RM1 72 aa11.81□□□□□ -0.52
CSNK1E-206ENST00000413574 CDC42SE1Q9NRR8 79 aa11.74□□□□□ -0.53
CSNK1E-206ENST00000413574 TNP1P09430 55 aa11.71□□□□□ -0.53
CSNK1E-206ENST00000413574 MDN1Q9NU22 5596 aa11.7□□□□□ -0.54
CSNK1E-206ENST00000413574 NEBP20929 6669 aa11.59□□□□□ -0.55
CSNK1E-206ENST00000413574 LCE3AQ5TA76 89 aa11.49□□□□□ -0.57
CSNK1E-206ENST00000413574 KRTAP19-7Q3SYF9 63 aa11.46□□□□□ -0.58
CSNK1E-206ENST00000413574 SPRR2EP22531 72 aa11.45□□□□□ -0.58
CSNK1E-206ENST00000413574 SPRR2BP35325 72 aa11.45□□□□□ -0.58
CSNK1E-206ENST00000413574 SPRR2AP35326 72 aa11.45□□□□□ -0.58
CSNK1E-206ENST00000413574 KRTAP25-1Q3LHN0 102 aa11.4□□□□□ -0.58
CSNK1E-206ENST00000413574 LCE1AQ5T7P2 110 aa11.4□□□□□ -0.58
CSNK1E-206ENST00000413574 KRTAP19-5Q3LI72 72 aa11.38□□□□□ -0.59
CSNK1E-206ENST00000413574 MT1EP04732 61 aa11.31□□□□□ -0.6
CSNK1E-206ENST00000413574 ROMO1P60602 79 aa11.27□□□□□ -0.6
CSNK1E-206ENST00000413574 BRK1Q8WUW1 75 aa11.27□□□□□ -0.6
CSNK1E-206ENST00000413574 SPRR2DP22532 72 aa11.05□□□□□ -0.64
CSNK1E-206ENST00000413574 KRTAP19-3Q7Z4W3 81 aa11.04□□□□□ -0.64
CSNK1E-206ENST00000413574 KRTAP12-3P60328 96 aa11.02□□□□□ -0.65
CSNK1E-206ENST00000413574 LCE5AQ5TCM9 118 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms