RNA–Protein interactions for RNA: ENST00000413305.5

SSUH2-203, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-203ENST00000413305 COX6B2Q6YFQ2 88 aa7.39□□□□□ -1.23
SSUH2-203ENST00000413305 RPL37P61927 97 aaKnown RBP7.38□□□□□ -1.23
SSUH2-203ENST00000413305 EPPK1P58107 5090 aaKnown RBP7.37□□□□□ -1.23
SSUH2-203ENST00000413305 FAT1Q14517 4588 aa7.34□□□□□ -1.23
SSUH2-203ENST00000413305 PKHD1L1Q86WI1 4243 aa7.32□□□□□ -1.24
SSUH2-203ENST00000413305 TPRXLQ17RH7 258 aa7.3□□□□□ -1.24
SSUH2-203ENST00000413305 Q5VSD8 79 aa7.19□□□□□ -1.26
SSUH2-203ENST00000413305 HSPG2P98160 4391 aa7.18□□□□□ -1.26
SSUH2-203ENST00000413305 LUZP6Q538Z0 58 aa7.17□□□□□ -1.26
SSUH2-203ENST00000413305 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
SSUH2-203ENST00000413305 KRTAP10-8P60410 259 aa7.15□□□□□ -1.26
SSUH2-203ENST00000413305 RYR1P21817 5038 aa7.14□□□□□ -1.27
SSUH2-203ENST00000413305 FLG2Q5D862 2391 aaPredicted RBP7.13□□□□□ -1.27
SSUH2-203ENST00000413305 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
SSUH2-203ENST00000413305 BIRC6Q9NR09 4857 aa7.1□□□□□ -1.27
SSUH2-203ENST00000413305 TNXBP22105 4242 aa7.09□□□□□ -1.27
SSUH2-203ENST00000413305 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
SSUH2-203ENST00000413305 C9orf92A6NGG3 77 aa7.07□□□□□ -1.28
SSUH2-203ENST00000413305 A0A0D9SG42 100 aa7.06□□□□□ -1.28
SSUH2-203ENST00000413305 FAT3Q8TDW7 4589 aa7.05□□□□□ -1.28
SSUH2-203ENST00000413305 LRP1Q07954 4544 aaKnown RBP7.04□□□□□ -1.28
SSUH2-203ENST00000413305 S4R3F8 94 aa7.04□□□□□ -1.28
SSUH2-203ENST00000413305 KRTAP10-6P60371 365 aaPredicted RBP7.03□□□□□ -1.28
SSUH2-203ENST00000413305 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
SSUH2-203ENST00000413305 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
SSUH2-203ENST00000413305 KRTAP13-4Q3LI77 160 aa6.98□□□□□ -1.29
SSUH2-203ENST00000413305 XP32Q5T750 250 aa6.97□□□□□ -1.29
SSUH2-203ENST00000413305 HERC2O95714 4834 aa6.93□□□□□ -1.3
SSUH2-203ENST00000413305 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
SSUH2-203ENST00000413305 PCLOQ9Y6V0 5065 aa6.89□□□□□ -1.31
SSUH2-203ENST00000413305 ABCA13Q86UQ4 5058 aa6.88□□□□□ -1.31
SSUH2-203ENST00000413305 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
SSUH2-203ENST00000413305 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
SSUH2-203ENST00000413305 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
SSUH2-203ENST00000413305 MYCBP2O75592 4640 aa6.86□□□□□ -1.31
SSUH2-203ENST00000413305 KRTAP3-3Q9BYR6 98 aa6.84□□□□□ -1.31
SSUH2-203ENST00000413305 KRTAP12-1P59990 96 aa6.83□□□□□ -1.32
SSUH2-203ENST00000413305 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
SSUH2-203ENST00000413305 M0QZ58 72 aa6.79□□□□□ -1.32
SSUH2-203ENST00000413305 KRTAP4-5Q9BYR2 181 aa6.75□□□□□ -1.33
SSUH2-203ENST00000413305 HERC1Q15751 4861 aa6.62□□□□□ -1.35
SSUH2-203ENST00000413305 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
SSUH2-203ENST00000413305 CAMK2N1Q7Z7J9 78 aa6.62□□□□□ -1.35
SSUH2-203ENST00000413305 LRP2P98164 4655 aa6.59□□□□□ -1.35
SSUH2-203ENST00000413305 J3QL48 77 aa6.57□□□□□ -1.36
SSUH2-203ENST00000413305 LPAP08519 4548 aa6.52□□□□□ -1.37
SSUH2-203ENST00000413305 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
SSUH2-203ENST00000413305 R4GN34 69 aa6.39□□□□□ -1.39
SSUH2-203ENST00000413305 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
SSUH2-203ENST00000413305 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
SSUH2-203ENST00000413305 HMCN2Q8NDA2 5059 aa6.34□□□□□ -1.39
SSUH2-203ENST00000413305 KRTAP19-2Q3LHN2 52 aa6.29□□□□□ -1.4
SSUH2-203ENST00000413305 LCE2DQ5TA82 110 aaPredicted RBP6.28□□□□□ -1.4
SSUH2-203ENST00000413305 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
SSUH2-203ENST00000413305 SPRR5A0A1B0GTR4 108 aa6.26□□□□□ -1.41
SSUH2-203ENST00000413305 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
SSUH2-203ENST00000413305 INE1O15225 51 aa6.22□□□□□ -1.41
SSUH2-203ENST00000413305 RNF213Q63HN8 5207 aa6.15□□□□□ -1.42
SSUH2-203ENST00000413305 MUC2Q02817 5179 aa6.07□□□□□ -1.44
SSUH2-203ENST00000413305 FLGP20930 4061 aaPredicted RBP6.07□□□□□ -1.44
SSUH2-203ENST00000413305 TNP1P09430 55 aa6.06□□□□□ -1.44
SSUH2-203ENST00000413305 LCE2CQ5TA81 110 aa6□□□□□ -1.45
SSUH2-203ENST00000413305 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
SSUH2-203ENST00000413305 MT1HP80294 61 aa5.84□□□□□ -1.47
SSUH2-203ENST00000413305 FAT4Q6V0I7 4981 aa5.8□□□□□ -1.48
SSUH2-203ENST00000413305 M0R2T5 61 aa5.75□□□□□ -1.49
SSUH2-203ENST00000413305 SPRR2GQ9BYE4 73 aa5.75□□□□□ -1.49
SSUH2-203ENST00000413305 MT2AP02795 61 aa5.68□□□□□ -1.5
SSUH2-203ENST00000413305 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
SSUH2-203ENST00000413305 KRTAP9-8Q9BYQ0 159 aa5.68□□□□□ -1.5
SSUH2-203ENST00000413305 MT1FP04733 61 aa5.66□□□□□ -1.5
SSUH2-203ENST00000413305 KRTAP10-10P60014 251 aa5.62□□□□□ -1.51
SSUH2-203ENST00000413305 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
SSUH2-203ENST00000413305 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
SSUH2-203ENST00000413305 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
SSUH2-203ENST00000413305 KRTAP8-1Q8IUC2 63 aa5.46□□□□□ -1.54
SSUH2-203ENST00000413305 MT1BP07438 61 aa5.44□□□□□ -1.54
SSUH2-203ENST00000413305 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
SSUH2-203ENST00000413305 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
SSUH2-203ENST00000413305 MT1XP80297 61 aa5.32□□□□□ -1.56
SSUH2-203ENST00000413305 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
SSUH2-203ENST00000413305 KRTAP12-3P60328 96 aa5.27□□□□□ -1.57
SSUH2-203ENST00000413305 LCE2BO14633 110 aa5.25□□□□□ -1.57
SSUH2-203ENST00000413305 KRTAP10-12P60413 245 aa5.25□□□□□ -1.57
SSUH2-203ENST00000413305 KRTAP9-2Q9BYQ4 174 aa5.2□□□□□ -1.58
SSUH2-203ENST00000413305 LOC100996750A0A140TA64 210 aa5.14□□□□□ -1.59
SSUH2-203ENST00000413305 KRTAP4-6Q9BYQ5 205 aa5.14□□□□□ -1.59
SSUH2-203ENST00000413305 USH2AO75445 5202 aa5.13□□□□□ -1.59
SSUH2-203ENST00000413305 KRTAP9-6A0A140TA67 174 aa5.12□□□□□ -1.59
SSUH2-203ENST00000413305 KRTAP10-7P60409 375 aaPredicted RBP5.11□□□□□ -1.59
SSUH2-203ENST00000413305 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
SSUH2-203ENST00000413305 LCE3CQ5T5A8 94 aa5□□□□□ -1.61
SSUH2-203ENST00000413305 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
SSUH2-203ENST00000413305 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
SSUH2-203ENST00000413305 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
SSUH2-203ENST00000413305 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
SSUH2-203ENST00000413305 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
SSUH2-203ENST00000413305 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
SSUH2-203ENST00000413305 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
SSUH2-203ENST00000413305 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms