RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 RBM12B-AS1Q9P1G2 102 aa5.1□□□□□ -1.59
SMPD4-203ENST00000412570 Q75L30 129 aa5.09□□□□□ -1.59
SMPD4-203ENST00000412570 Q5VV11 94 aa5.08□□□□□ -1.6
SMPD4-203ENST00000412570 TPRXLQ17RH7 258 aa5.08□□□□□ -1.6
SMPD4-203ENST00000412570 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
SMPD4-203ENST00000412570 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
SMPD4-203ENST00000412570 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
SMPD4-203ENST00000412570 COX6B2Q6YFQ2 88 aa5.04□□□□□ -1.6
SMPD4-203ENST00000412570 ACYP2P14621 99 aa5.04□□□□□ -1.6
SMPD4-203ENST00000412570 KRTAP4-1Q9BYQ7 146 aa5.04□□□□□ -1.6
SMPD4-203ENST00000412570 LINC01558Q9Y6Z2 57 aa5.03□□□□□ -1.6
SMPD4-203ENST00000412570 KTN1-AS1Q86SY8 53 aa5.02□□□□□ -1.61
SMPD4-203ENST00000412570 H3BS24 57 aa5.01□□□□□ -1.61
SMPD4-203ENST00000412570 SEC61BP60468 96 aaKnown RBP5□□□□□ -1.61
SMPD4-203ENST00000412570 DMAC1Q96GE9 116 aa4.98□□□□□ -1.61
SMPD4-203ENST00000412570 KRTAP3-1Q9BYR8 98 aa4.97□□□□□ -1.61
SMPD4-203ENST00000412570 LCA10Q71F78 164 aa4.94□□□□□ -1.62
SMPD4-203ENST00000412570 CDC42SE1Q9NRR8 79 aa4.94□□□□□ -1.62
SMPD4-203ENST00000412570 ADM2Q7Z4H4 148 aa4.93□□□□□ -1.62
SMPD4-203ENST00000412570 A0A1B0GU69 56 aa4.9□□□□□ -1.63
SMPD4-203ENST00000412570 M0R2T5 61 aa4.89□□□□□ -1.63
SMPD4-203ENST00000412570 S4R3F8 94 aa4.86□□□□□ -1.63
SMPD4-203ENST00000412570 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
SMPD4-203ENST00000412570 H1FX-AS1Q4G0G2 97 aa4.82□□□□□ -1.64
SMPD4-203ENST00000412570 A6NN06 94 aa4.81□□□□□ -1.64
SMPD4-203ENST00000412570 LINC01554Q52M75 96 aa4.8□□□□□ -1.64
SMPD4-203ENST00000412570 UQCR11O14957 56 aa4.8□□□□□ -1.64
SMPD4-203ENST00000412570 MUC17Q685J3 4493 aa4.8□□□□□ -1.64
SMPD4-203ENST00000412570 CSAG1Q6PB30 78 aa4.78□□□□□ -1.64
SMPD4-203ENST00000412570 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
SMPD4-203ENST00000412570 SPATA8Q6RVD6 105 aa4.76□□□□□ -1.65
SMPD4-203ENST00000412570 A0A0D9SG42 100 aa4.76□□□□□ -1.65
SMPD4-203ENST00000412570 KRTAP3-3Q9BYR6 98 aa4.75□□□□□ -1.65
SMPD4-203ENST00000412570 P0C880 135 aa4.72□□□□□ -1.65
SMPD4-203ENST00000412570 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
SMPD4-203ENST00000412570 LORP23490 312 aaPredicted RBP4.64□□□□□ -1.67
SMPD4-203ENST00000412570 KRTAP19-2Q3LHN2 52 aa4.64□□□□□ -1.67
SMPD4-203ENST00000412570 A0A1B0GU33 70 aa4.63□□□□□ -1.67
SMPD4-203ENST00000412570 LCE2CQ5TA81 110 aa4.63□□□□□ -1.67
SMPD4-203ENST00000412570 SPINT4Q6UDR6 99 aa4.61□□□□□ -1.67
SMPD4-203ENST00000412570 M0QZ58 72 aa4.6□□□□□ -1.67
SMPD4-203ENST00000412570 MT1HP80294 61 aa4.6□□□□□ -1.67
SMPD4-203ENST00000412570 H0YAA0 97 aa4.58□□□□□ -1.68
SMPD4-203ENST00000412570 KRTAP13-4Q3LI77 160 aa4.58□□□□□ -1.68
SMPD4-203ENST00000412570 R4GN34 69 aa4.58□□□□□ -1.68
SMPD4-203ENST00000412570 FLGP20930 4061 aaPredicted RBP4.57□□□□□ -1.68
SMPD4-203ENST00000412570 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
SMPD4-203ENST00000412570 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
SMPD4-203ENST00000412570 KRTAP3-2Q9BYR7 98 aa4.56□□□□□ -1.68
SMPD4-203ENST00000412570 USH2AO75445 5202 aa4.54□□□□□ -1.68
SMPD4-203ENST00000412570 K7ERS5 55 aa4.54□□□□□ -1.68
SMPD4-203ENST00000412570 ROMO1P60602 79 aa4.45□□□□□ -1.7
SMPD4-203ENST00000412570 MT1FP04733 61 aa4.45□□□□□ -1.7
SMPD4-203ENST00000412570 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
SMPD4-203ENST00000412570 MT2AP02795 61 aa4.42□□□□□ -1.7
SMPD4-203ENST00000412570 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
SMPD4-203ENST00000412570 KRTAP25-1Q3LHN0 102 aa4.4□□□□□ -1.71
SMPD4-203ENST00000412570 KRTAP9-8Q9BYQ0 159 aa4.38□□□□□ -1.71
SMPD4-203ENST00000412570 CAMK2N1Q7Z7J9 78 aa4.37□□□□□ -1.71
SMPD4-203ENST00000412570 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
SMPD4-203ENST00000412570 C10orf95Q9H7T3 257 aa4.36□□□□□ -1.71
SMPD4-203ENST00000412570 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
SMPD4-203ENST00000412570 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
SMPD4-203ENST00000412570 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
SMPD4-203ENST00000412570 PLAC4Q8WY50 150 aa4.26□□□□□ -1.73
SMPD4-203ENST00000412570 LCE2BO14633 110 aa4.2□□□□□ -1.74
SMPD4-203ENST00000412570 KRTAP9-3Q9BYQ3 159 aa4.19□□□□□ -1.74
SMPD4-203ENST00000412570 KMT2DO14686 5537 aa4.19□□□□□ -1.74
SMPD4-203ENST00000412570 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.74
SMPD4-203ENST00000412570 LUZP6Q538Z0 58 aa4.15□□□□□ -1.75
SMPD4-203ENST00000412570 SSPOA2VEC9 5147 aa4.13□□□□□ -1.75
SMPD4-203ENST00000412570 MT1BP07438 61 aa4.12□□□□□ -1.75
SMPD4-203ENST00000412570 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
SMPD4-203ENST00000412570 KRTAP19-8Q3LI54 63 aa4□□□□□ -1.77
SMPD4-203ENST00000412570 MT1XP80297 61 aa3.99□□□□□ -1.77
SMPD4-203ENST00000412570 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SMPD4-203ENST00000412570 TNP1P09430 55 aa3.97□□□□□ -1.77
SMPD4-203ENST00000412570 KRTAP10-7P60409 375 aaPredicted RBP3.96□□□□□ -1.77
SMPD4-203ENST00000412570 KRTAP9-2Q9BYQ4 174 aa3.96□□□□□ -1.77
SMPD4-203ENST00000412570 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
SMPD4-203ENST00000412570 KRTAP15-1Q3LI76 137 aa3.94□□□□□ -1.78
SMPD4-203ENST00000412570 FCGBPQ9Y6R7 5405 aaPredicted RBP3.94□□□□□ -1.78
SMPD4-203ENST00000412570 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
SMPD4-203ENST00000412570 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
SMPD4-203ENST00000412570 PRO2289Q9P1D8 64 aa3.92□□□□□ -1.78
SMPD4-203ENST00000412570 MACF1Q9UPN3 7388 aaKnown RBP3.92□□□□□ -1.78
SMPD4-203ENST00000412570 LCE3AQ5TA76 89 aa3.89□□□□□ -1.79
SMPD4-203ENST00000412570 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
SMPD4-203ENST00000412570 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
SMPD4-203ENST00000412570 DSTQ03001 7570 aaKnown RBP3.84□□□□□ -1.79
SMPD4-203ENST00000412570 MUC12Q9UKN1 5478 aa3.83□□□□□ -1.8
SMPD4-203ENST00000412570 CRCT1Q9UGL9 99 aa3.79□□□□□ -1.8
SMPD4-203ENST00000412570 KRTAP23-1A1A580 65 aa3.74□□□□□ -1.81
SMPD4-203ENST00000412570 KRTAP19-6Q3LI70 58 aa3.74□□□□□ -1.81
SMPD4-203ENST00000412570 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.81
SMPD4-203ENST00000412570 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
SMPD4-203ENST00000412570 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
SMPD4-203ENST00000412570 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
SMPD4-203ENST00000412570 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
SMPD4-203ENST00000412570 KRTAP4-7Q9BYR0 210 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms