RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
CPEB3-202ENST00000412050 KMT2AQ03164 3969 aa4.77□□□□□ -1.65
CPEB3-202ENST00000412050 ANK2Q01484 3957 aa4.75□□□□□ -1.65
CPEB3-202ENST00000412050 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CPEB3-202ENST00000412050 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
CPEB3-202ENST00000412050 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
CPEB3-202ENST00000412050 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
CPEB3-202ENST00000412050 VPS13BQ7Z7G8 4022 aa4.63□□□□□ -1.67
CPEB3-202ENST00000412050 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
CPEB3-202ENST00000412050 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
CPEB3-202ENST00000412050 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
CPEB3-202ENST00000412050 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
CPEB3-202ENST00000412050 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
CPEB3-202ENST00000412050 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
CPEB3-202ENST00000412050 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
CPEB3-202ENST00000412050 ANK3Q12955 4377 aaKnown RBP4.43□□□□□ -1.7
CPEB3-202ENST00000412050 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
CPEB3-202ENST00000412050 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
CPEB3-202ENST00000412050 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
CPEB3-202ENST00000412050 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
CPEB3-202ENST00000412050 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CPEB3-202ENST00000412050 SPRR2EP22531 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 SPRR2BP35325 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 SPRR2AP35326 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
CPEB3-202ENST00000412050 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
CPEB3-202ENST00000412050 MT1HL1P0DM35 61 aa4.27□□□□□ -1.73
CPEB3-202ENST00000412050 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CPEB3-202ENST00000412050 SPRR2DP22532 72 aa4.18□□□□□ -1.74
CPEB3-202ENST00000412050 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
CPEB3-202ENST00000412050 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
CPEB3-202ENST00000412050 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
CPEB3-202ENST00000412050 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CPEB3-202ENST00000412050 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CPEB3-202ENST00000412050 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
CPEB3-202ENST00000412050 LCE2BO14633 110 aa4.05□□□□□ -1.76
CPEB3-202ENST00000412050 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CPEB3-202ENST00000412050 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
CPEB3-202ENST00000412050 LCE2CQ5TA81 110 aa4.01□□□□□ -1.77
CPEB3-202ENST00000412050 DNAH17Q9UFH2 4485 aa3.99□□□□□ -1.77
CPEB3-202ENST00000412050 MT3P25713 68 aa3.96□□□□□ -1.78
CPEB3-202ENST00000412050 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CPEB3-202ENST00000412050 MT1HP80294 61 aa3.95□□□□□ -1.78
CPEB3-202ENST00000412050 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
CPEB3-202ENST00000412050 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
CPEB3-202ENST00000412050 MT1GP13640 62 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 MT4P47944 62 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 DNAH9Q9NYC9 4486 aa3.86□□□□□ -1.79
CPEB3-202ENST00000412050 PKD1P98161 4303 aa3.85□□□□□ -1.79
CPEB3-202ENST00000412050 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
CPEB3-202ENST00000412050 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
CPEB3-202ENST00000412050 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
CPEB3-202ENST00000412050 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
CPEB3-202ENST00000412050 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
CPEB3-202ENST00000412050 MT2AP02795 61 aa3.79□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
CPEB3-202ENST00000412050 MT1FP04733 61 aa3.74□□□□□ -1.81
CPEB3-202ENST00000412050 TNXBP22105 4242 aa3.67□□□□□ -1.82
CPEB3-202ENST00000412050 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
CPEB3-202ENST00000412050 PRM1P04553 51 aa3.65□□□□□ -1.83
CPEB3-202ENST00000412050 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
CPEB3-202ENST00000412050 LPAP08519 4548 aa3.52□□□□□ -1.85
CPEB3-202ENST00000412050 FAT1Q14517 4588 aa3.51□□□□□ -1.85
CPEB3-202ENST00000412050 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
CPEB3-202ENST00000412050 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
CPEB3-202ENST00000412050 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
CPEB3-202ENST00000412050 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
CPEB3-202ENST00000412050 MT1XP80297 61 aa3.43□□□□□ -1.86
CPEB3-202ENST00000412050 HSPG2P98160 4391 aa3.43□□□□□ -1.86
CPEB3-202ENST00000412050 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
CPEB3-202ENST00000412050 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
CPEB3-202ENST00000412050 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
CPEB3-202ENST00000412050 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.88
CPEB3-202ENST00000412050 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
CPEB3-202ENST00000412050 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
CPEB3-202ENST00000412050 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
CPEB3-202ENST00000412050 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
CPEB3-202ENST00000412050 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.89
CPEB3-202ENST00000412050 MT1LQ93083 61 aa3.27□□□□□ -1.89
CPEB3-202ENST00000412050 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
CPEB3-202ENST00000412050 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
CPEB3-202ENST00000412050 MT1BP07438 61 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
CPEB3-202ENST00000412050 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
CPEB3-202ENST00000412050 MT1EP04732 61 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms