RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
CPEB3-202ENST00000412050 KMT2AQ03164 3969 aa4.77□□□□□ -1.65
CPEB3-202ENST00000412050 ANK2Q01484 3957 aa4.75□□□□□ -1.65
CPEB3-202ENST00000412050 KRTAP3-1Q9BYR8 98 aa4.72□□□□□ -1.65
CPEB3-202ENST00000412050 ALMS1Q8TCU4 4167 aa4.71□□□□□ -1.66
CPEB3-202ENST00000412050 HUWE1Q7Z6Z7 4374 aaKnown RBP4.67□□□□□ -1.66
CPEB3-202ENST00000412050 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
CPEB3-202ENST00000412050 VPS13BQ7Z7G8 4022 aa4.63□□□□□ -1.67
CPEB3-202ENST00000412050 DNAH2Q9P225 4427 aa4.59□□□□□ -1.68
CPEB3-202ENST00000412050 DNAH7Q8WXX0 4024 aa4.56□□□□□ -1.68
CPEB3-202ENST00000412050 SPRR2FQ96RM1 72 aa4.5□□□□□ -1.69
CPEB3-202ENST00000412050 DNAH3Q8TD57 4116 aa4.46□□□□□ -1.7
CPEB3-202ENST00000412050 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
CPEB3-202ENST00000412050 SPRR5A0A1B0GTR4 108 aa4.44□□□□□ -1.7
CPEB3-202ENST00000412050 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
CPEB3-202ENST00000412050 ANK3Q12955 4377 aaKnown RBP4.43□□□□□ -1.7
CPEB3-202ENST00000412050 FLGP20930 4061 aaPredicted RBP4.41□□□□□ -1.7
CPEB3-202ENST00000412050 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
CPEB3-202ENST00000412050 PRKDCP78527 4128 aaKnown RBP4.39□□□□□ -1.71
CPEB3-202ENST00000412050 DNAH6Q9C0G6 4158 aa4.38□□□□□ -1.71
CPEB3-202ENST00000412050 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
CPEB3-202ENST00000412050 SPRR2EP22531 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 SPRR2BP35325 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 SPRR2AP35326 72 aa4.33□□□□□ -1.72
CPEB3-202ENST00000412050 LCE3BQ5TA77 95 aa4.32□□□□□ -1.72
CPEB3-202ENST00000412050 DNAH1Q9P2D7 4330 aa4.32□□□□□ -1.72
CPEB3-202ENST00000412050 MT1HL1P0DM35 61 aa4.27□□□□□ -1.73
CPEB3-202ENST00000412050 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
CPEB3-202ENST00000412050 SPRR2DP22532 72 aa4.18□□□□□ -1.74
CPEB3-202ENST00000412050 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
CPEB3-202ENST00000412050 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
CPEB3-202ENST00000412050 DNAH10Q8IVF4 4471 aa4.14□□□□□ -1.75
CPEB3-202ENST00000412050 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
CPEB3-202ENST00000412050 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
CPEB3-202ENST00000412050 DNAH8Q96JB1 4490 aa4.06□□□□□ -1.76
CPEB3-202ENST00000412050 LCE2BO14633 110 aa4.05□□□□□ -1.76
CPEB3-202ENST00000412050 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CPEB3-202ENST00000412050 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
CPEB3-202ENST00000412050 LCE2CQ5TA81 110 aa4.01□□□□□ -1.77
CPEB3-202ENST00000412050 DNAH17Q9UFH2 4485 aa3.99□□□□□ -1.77
CPEB3-202ENST00000412050 MT3P25713 68 aa3.96□□□□□ -1.78
CPEB3-202ENST00000412050 LCE1BQ5T7P3 118 aa3.96□□□□□ -1.78
CPEB3-202ENST00000412050 MT1HP80294 61 aa3.95□□□□□ -1.78
CPEB3-202ENST00000412050 LCE2DQ5TA82 110 aaPredicted RBP3.94□□□□□ -1.78
CPEB3-202ENST00000412050 VPS13DQ5THJ4 4388 aa3.93□□□□□ -1.78
CPEB3-202ENST00000412050 MT1GP13640 62 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 MT4P47944 62 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 PKHD1L1Q86WI1 4243 aa3.89□□□□□ -1.79
CPEB3-202ENST00000412050 DNAH9Q9NYC9 4486 aa3.86□□□□□ -1.79
CPEB3-202ENST00000412050 PKD1P98161 4303 aa3.85□□□□□ -1.79
CPEB3-202ENST00000412050 PKHD1P08F94 4074 aa3.83□□□□□ -1.8
CPEB3-202ENST00000412050 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1DQ5T752 114 aa3.82□□□□□ -1.8
CPEB3-202ENST00000412050 DYNC2H1Q8NCM8 4307 aaKnown RBP3.82□□□□□ -1.8
CPEB3-202ENST00000412050 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
CPEB3-202ENST00000412050 DNAH11Q96DT5 4516 aa3.79□□□□□ -1.8
CPEB3-202ENST00000412050 MT2AP02795 61 aa3.79□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1CQ5T751 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1EQ5T753 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1FQ5T754 118 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE1AQ5T7P2 110 aa3.78□□□□□ -1.8
CPEB3-202ENST00000412050 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
CPEB3-202ENST00000412050 MT1FP04733 61 aa3.74□□□□□ -1.81
CPEB3-202ENST00000412050 TNXBP22105 4242 aa3.67□□□□□ -1.82
CPEB3-202ENST00000412050 KRTAP19-4Q3LI73 84 aa3.66□□□□□ -1.82
CPEB3-202ENST00000412050 PRM1P04553 51 aa3.65□□□□□ -1.83
CPEB3-202ENST00000412050 STARD9Q9P2P6 4700 aa3.58□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP19-8Q3LI54 63 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 FAT3Q8TDW7 4589 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
CPEB3-202ENST00000412050 SACSQ9NZJ4 4579 aa3.54□□□□□ -1.84
CPEB3-202ENST00000412050 LPAP08519 4548 aa3.52□□□□□ -1.85
CPEB3-202ENST00000412050 FAT1Q14517 4588 aa3.51□□□□□ -1.85
CPEB3-202ENST00000412050 LCE2AQ5TA79 106 aaPredicted RBP3.46□□□□□ -1.86
CPEB3-202ENST00000412050 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
CPEB3-202ENST00000412050 KRTAP19-1Q8IUB9 90 aa3.45□□□□□ -1.86
CPEB3-202ENST00000412050 LRP1Q07954 4544 aaKnown RBP3.43□□□□□ -1.86
CPEB3-202ENST00000412050 MT1XP80297 61 aa3.43□□□□□ -1.86
CPEB3-202ENST00000412050 HSPG2P98160 4391 aa3.43□□□□□ -1.86
CPEB3-202ENST00000412050 PLECQ15149 4684 aaKnown RBP3.42□□□□□ -1.86
CPEB3-202ENST00000412050 LRP1BQ9NZR2 4599 aa3.37□□□□□ -1.87
CPEB3-202ENST00000412050 KRTAP4-7Q9BYR0 210 aa3.37□□□□□ -1.87
CPEB3-202ENST00000412050 DNAH5Q8TE73 4624 aa3.34□□□□□ -1.88
CPEB3-202ENST00000412050 KRTAP20-1Q3LI63 56 aa3.33□□□□□ -1.88
CPEB3-202ENST00000412050 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
CPEB3-202ENST00000412050 LOC100996750A0A140TA64 210 aa3.32□□□□□ -1.88
CPEB3-202ENST00000412050 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
CPEB3-202ENST00000412050 DYNC1H1Q14204 4646 aaKnown RBP3.28□□□□□ -1.89
CPEB3-202ENST00000412050 MT1LQ93083 61 aa3.27□□□□□ -1.89
CPEB3-202ENST00000412050 SYNE2Q8WXH0 6885 aaKnown RBP3.26□□□□□ -1.89
CPEB3-202ENST00000412050 KRTAP9-8Q9BYQ0 159 aa3.2□□□□□ -1.9
CPEB3-202ENST00000412050 MT1BP07438 61 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP19-6Q3LI70 58 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP9-2Q9BYQ4 174 aa3.19□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP4-3Q9BYR4 195 aa3.18□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
CPEB3-202ENST00000412050 KRTAP9-6A0A140TA67 174 aa3.13□□□□□ -1.91
CPEB3-202ENST00000412050 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
CPEB3-202ENST00000412050 MT1EP04732 61 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms