RNA–Protein interactions for RNA: ENST00000409606.5

R3HDM1-203, Transcript of R3H domain containing 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene R3HDM1, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-203ENST00000409606 LINC00304Q8N9R0 145 aa2.66□□□□□ -1.98
R3HDM1-203ENST00000409606 CRCT1Q9UGL9 99 aa2.66□□□□□ -1.98
R3HDM1-203ENST00000409606 NDUFB1O75438 58 aa2.65□□□□□ -1.99
R3HDM1-203ENST00000409606 OCR1Q9BZK8 76 aa2.65□□□□□ -1.99
R3HDM1-203ENST00000409606 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
R3HDM1-203ENST00000409606 ROMO1P60602 79 aa2.64□□□□□ -1.99
R3HDM1-203ENST00000409606 NOTCH2NLQ7Z3S9 236 aa2.64□□□□□ -1.99
R3HDM1-203ENST00000409606 C8orf17Q9NRJ1 99 aa2.64□□□□□ -1.99
R3HDM1-203ENST00000409606 A0A0G2JQZ4 141 aa2.63□□□□□ -1.99
R3HDM1-203ENST00000409606 A0A1B0GVX0 72 aa2.63□□□□□ -1.99
R3HDM1-203ENST00000409606 K7EQZ3 153 aa2.63□□□□□ -1.99
R3HDM1-203ENST00000409606 A0A087WSZ3 146 aa2.63□□□□□ -1.99
R3HDM1-203ENST00000409606 ZCCHC13Q8WW36 166 aaKnown RBP2.63□□□□□ -1.99
R3HDM1-203ENST00000409606 K7ERS5 55 aa2.62□□□□□ -1.99
R3HDM1-203ENST00000409606 CSAG1Q6PB30 78 aa2.62□□□□□ -1.99
R3HDM1-203ENST00000409606 MIR22HGQ0VDD5 57 aa2.62□□□□□ -1.99
R3HDM1-203ENST00000409606 H0Y9P7 68 aa2.62□□□□□ -1.99
R3HDM1-203ENST00000409606 PCOTHQ58A44 107 aa2.61□□□□□ -1.99
R3HDM1-203ENST00000409606 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
R3HDM1-203ENST00000409606 LOC101927531A0A1B0GV80 90 aa2.6□□□□□ -1.99
R3HDM1-203ENST00000409606 RPL37P61927 97 aaKnown RBP2.58□□□□□ -2
R3HDM1-203ENST00000409606 NDUFAF8A1L188 74 aa2.56□□□□□ -2
R3HDM1-203ENST00000409606 COA5Q86WW8 74 aa2.56□□□□□ -2
R3HDM1-203ENST00000409606 KRTAP4-1Q9BYQ7 146 aa2.55□□□□□ -2
R3HDM1-203ENST00000409606 TP53AIP1Q9HCN2 124 aa2.55□□□□□ -2
R3HDM1-203ENST00000409606 H3BPC8 53 aa2.55□□□□□ -2
R3HDM1-203ENST00000409606 MRPL34Q9BQ48 92 aaKnown RBP2.54□□□□□ -2
R3HDM1-203ENST00000409606 LORP23490 312 aaPredicted RBP2.54□□□□□ -2
R3HDM1-203ENST00000409606 P0C880 135 aa2.53□□□□□ -2
R3HDM1-203ENST00000409606 HRES1P13985 223 aa2.53□□□□□ -2
R3HDM1-203ENST00000409606 SPINK7P58062 85 aa2.53□□□□□ -2
R3HDM1-203ENST00000409606 Q5W150 140 aa2.53□□□□□ -2
R3HDM1-203ENST00000409606 KRTAP9-7A8MTY7 169 aa2.53□□□□□ -2.01
R3HDM1-203ENST00000409606 SPANXA2-OT1Q8N9U9 137 aa2.53□□□□□ -2.01
R3HDM1-203ENST00000409606 FAT4Q6V0I7 4981 aa2.51□□□□□ -2.01
R3HDM1-203ENST00000409606 IGKV2-30P06310 120 aa2.51□□□□□ -2.01
R3HDM1-203ENST00000409606 IGLV7-46A0A075B6I9 117 aa2.5□□□□□ -2.01
R3HDM1-203ENST00000409606 KRTAP3-1Q9BYR8 98 aa2.49□□□□□ -2.01
R3HDM1-203ENST00000409606 SPINT4Q6UDR6 99 aa2.49□□□□□ -2.01
R3HDM1-203ENST00000409606 MUC2Q02817 5179 aa2.49□□□□□ -2.01
R3HDM1-203ENST00000409606 LINC01558Q9Y6Z2 57 aa2.47□□□□□ -2.01
R3HDM1-203ENST00000409606 A0A1B0GU69 56 aa2.47□□□□□ -2.01
R3HDM1-203ENST00000409606 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.47□□□□□ -2.01
R3HDM1-203ENST00000409606 ACYP2P14621 99 aa2.47□□□□□ -2.01
R3HDM1-203ENST00000409606 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
R3HDM1-203ENST00000409606 CAMK2N1Q7Z7J9 78 aa2.44□□□□□ -2.02
R3HDM1-203ENST00000409606 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
R3HDM1-203ENST00000409606 IGKV2D-30A0A075B6S6 120 aa2.43□□□□□ -2.02
R3HDM1-203ENST00000409606 UQCR11O14957 56 aa2.42□□□□□ -2.02
R3HDM1-203ENST00000409606 H0YAA0 97 aa2.4□□□□□ -2.02
R3HDM1-203ENST00000409606 MT1HP80294 61 aa2.4□□□□□ -2.03
R3HDM1-203ENST00000409606 C9orf92A6NGG3 77 aa2.39□□□□□ -2.03
R3HDM1-203ENST00000409606 COX6B2Q6YFQ2 88 aa2.39□□□□□ -2.03
R3HDM1-203ENST00000409606 SPATA8Q6RVD6 105 aa2.37□□□□□ -2.03
R3HDM1-203ENST00000409606 KRTAP9-8Q9BYQ0 159 aa2.37□□□□□ -2.03
R3HDM1-203ENST00000409606 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
R3HDM1-203ENST00000409606 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
R3HDM1-203ENST00000409606 CRIPTQ9P021 101 aa2.35□□□□□ -2.03
R3HDM1-203ENST00000409606 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
R3HDM1-203ENST00000409606 KRTAP4-8Q9BYQ9 185 aa2.34□□□□□ -2.03
R3HDM1-203ENST00000409606 KRTAP15-1Q3LI76 137 aa2.3□□□□□ -2.04
R3HDM1-203ENST00000409606 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
R3HDM1-203ENST00000409606 KRTAP9-3Q9BYQ3 159 aa2.29□□□□□ -2.04
R3HDM1-203ENST00000409606 SPRR2GQ9BYE4 73 aa2.29□□□□□ -2.04
R3HDM1-203ENST00000409606 A0A1B0GU33 70 aa2.29□□□□□ -2.04
R3HDM1-203ENST00000409606 M0R2T5 61 aa2.28□□□□□ -2.05
R3HDM1-203ENST00000409606 MT2AP02795 61 aa2.28□□□□□ -2.05
R3HDM1-203ENST00000409606 KRTAP19-8Q3LI54 63 aa2.28□□□□□ -2.05
R3HDM1-203ENST00000409606 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.05
R3HDM1-203ENST00000409606 KRTAP19-1Q8IUB9 90 aa2.26□□□□□ -2.05
R3HDM1-203ENST00000409606 A0A0D9SG42 100 aa2.25□□□□□ -2.05
R3HDM1-203ENST00000409606 MT1FP04733 61 aa2.25□□□□□ -2.05
R3HDM1-203ENST00000409606 LCE3BQ5TA77 95 aa2.25□□□□□ -2.05
R3HDM1-203ENST00000409606 S4R3F8 94 aa2.24□□□□□ -2.05
R3HDM1-203ENST00000409606 KRTAP19-6Q3LI70 58 aa2.23□□□□□ -2.05
R3HDM1-203ENST00000409606 R4GN34 69 aa2.23□□□□□ -2.05
R3HDM1-203ENST00000409606 USH2AO75445 5202 aa2.22□□□□□ -2.05
R3HDM1-203ENST00000409606 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
R3HDM1-203ENST00000409606 MT1BP07438 61 aa2.19□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP19-4Q3LI73 84 aa2.17□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP4-7Q9BYR0 210 aa2.16□□□□□ -2.06
R3HDM1-203ENST00000409606 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP13-4Q3LI77 160 aa2.16□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
R3HDM1-203ENST00000409606 KRTAP9-4Q9BYQ2 154 aa2.16□□□□□ -2.06
R3HDM1-203ENST00000409606 C10orf95Q9H7T3 257 aa2.14□□□□□ -2.07
R3HDM1-203ENST00000409606 M0QZ58 72 aa2.13□□□□□ -2.07
R3HDM1-203ENST00000409606 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
R3HDM1-203ENST00000409606 NEBP20929 6669 aa2.1□□□□□ -2.07
R3HDM1-203ENST00000409606 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
R3HDM1-203ENST00000409606 KRTAP5-9P26371 169 aa2.09□□□□□ -2.07
R3HDM1-203ENST00000409606 KRTAP12-2P59991 146 aa2.09□□□□□ -2.07
R3HDM1-203ENST00000409606 MT1XP80297 61 aa2.09□□□□□ -2.07
R3HDM1-203ENST00000409606 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
R3HDM1-203ENST00000409606 LCE1DQ5T752 114 aa2.09□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP2-2Q9BYT5 123 aa2.08□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP2-1Q9BYU5 128 aa2.08□□□□□ -2.08
R3HDM1-203ENST00000409606 KRTAP12-1P59990 96 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms