RNA–Protein interactions for RNA: ENST00000405356.5

NOLC1-202, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

TSL 1 (best) BASIC

Gene NOLC1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-202ENST00000405356 VPS13BQ7Z7G8 4022 aa4.61□□□□□ -1.67
NOLC1-202ENST00000405356 APOBP04114 4563 aaKnown RBP4.6□□□□□ -1.67
NOLC1-202ENST00000405356 PKD1P98161 4303 aa4.59□□□□□ -1.67
NOLC1-202ENST00000405356 RYR1P21817 5038 aa4.58□□□□□ -1.68
NOLC1-202ENST00000405356 A0A1B0GU33 70 aa4.58□□□□□ -1.68
NOLC1-202ENST00000405356 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
NOLC1-202ENST00000405356 KRTAP17-1Q9BYP8 105 aa4.57□□□□□ -1.68
NOLC1-202ENST00000405356 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
NOLC1-202ENST00000405356 ROMO1P60602 79 aa4.55□□□□□ -1.68
NOLC1-202ENST00000405356 A0A0A0MQY5 61 aa4.53□□□□□ -1.68
NOLC1-202ENST00000405356 H1FX-AS1Q4G0G2 97 aa4.52□□□□□ -1.69
NOLC1-202ENST00000405356 A0A0D9SG42 100 aa4.51□□□□□ -1.69
NOLC1-202ENST00000405356 LRP1Q07954 4544 aaKnown RBP4.5□□□□□ -1.69
NOLC1-202ENST00000405356 S4R3F8 94 aa4.5□□□□□ -1.69
NOLC1-202ENST00000405356 K7ERS5 55 aa4.49□□□□□ -1.69
NOLC1-202ENST00000405356 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
NOLC1-202ENST00000405356 EPPK1P58107 5090 aaKnown RBP4.48□□□□□ -1.69
NOLC1-202ENST00000405356 HSPG2P98160 4391 aa4.47□□□□□ -1.69
NOLC1-202ENST00000405356 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
NOLC1-202ENST00000405356 P0C880 135 aa4.46□□□□□ -1.7
NOLC1-202ENST00000405356 M0R2T5 61 aa4.45□□□□□ -1.7
NOLC1-202ENST00000405356 C10orf95Q9H7T3 257 aa4.44□□□□□ -1.7
NOLC1-202ENST00000405356 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
NOLC1-202ENST00000405356 BIRC6Q9NR09 4857 aa4.4□□□□□ -1.7
NOLC1-202ENST00000405356 HERC2O95714 4834 aa4.38□□□□□ -1.71
NOLC1-202ENST00000405356 KRTAP13-4Q3LI77 160 aa4.37□□□□□ -1.71
NOLC1-202ENST00000405356 FAT3Q8TDW7 4589 aa4.36□□□□□ -1.71
NOLC1-202ENST00000405356 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
NOLC1-202ENST00000405356 ABCA13Q86UQ4 5058 aa4.3□□□□□ -1.72
NOLC1-202ENST00000405356 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
NOLC1-202ENST00000405356 R4GN34 69 aa4.27□□□□□ -1.73
NOLC1-202ENST00000405356 PKHD1L1Q86WI1 4243 aa4.26□□□□□ -1.73
NOLC1-202ENST00000405356 KRTAP3-3Q9BYR6 98 aa4.25□□□□□ -1.73
NOLC1-202ENST00000405356 M0QZ58 72 aa4.25□□□□□ -1.73
NOLC1-202ENST00000405356 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
NOLC1-202ENST00000405356 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
NOLC1-202ENST00000405356 TNXBP22105 4242 aa4.21□□□□□ -1.73
NOLC1-202ENST00000405356 LRP2P98164 4655 aa4.21□□□□□ -1.74
NOLC1-202ENST00000405356 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
NOLC1-202ENST00000405356 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
NOLC1-202ENST00000405356 LPAP08519 4548 aa4.15□□□□□ -1.74
NOLC1-202ENST00000405356 KRTAP12-1P59990 96 aa4.14□□□□□ -1.75
NOLC1-202ENST00000405356 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
NOLC1-202ENST00000405356 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
NOLC1-202ENST00000405356 LUZP6Q538Z0 58 aa4.1□□□□□ -1.75
NOLC1-202ENST00000405356 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
NOLC1-202ENST00000405356 HERC1Q15751 4861 aa4.07□□□□□ -1.76
NOLC1-202ENST00000405356 PLAC4Q8WY50 150 aa4.03□□□□□ -1.77
NOLC1-202ENST00000405356 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
NOLC1-202ENST00000405356 HMCN2Q8NDA2 5059 aa3.93□□□□□ -1.78
NOLC1-202ENST00000405356 MT1HP80294 61 aa3.92□□□□□ -1.78
NOLC1-202ENST00000405356 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
NOLC1-202ENST00000405356 RNF213Q63HN8 5207 aa3.87□□□□□ -1.79
NOLC1-202ENST00000405356 MUC2Q02817 5179 aa3.86□□□□□ -1.79
NOLC1-202ENST00000405356 LCE2CQ5TA81 110 aa3.84□□□□□ -1.8
NOLC1-202ENST00000405356 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
NOLC1-202ENST00000405356 MT2AP02795 61 aa3.8□□□□□ -1.8
NOLC1-202ENST00000405356 TNP1P09430 55 aa3.79□□□□□ -1.8
NOLC1-202ENST00000405356 MT1FP04733 61 aa3.78□□□□□ -1.81
NOLC1-202ENST00000405356 MUC17Q685J3 4493 aa3.77□□□□□ -1.81
NOLC1-202ENST00000405356 FAT4Q6V0I7 4981 aa3.77□□□□□ -1.81
NOLC1-202ENST00000405356 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
NOLC1-202ENST00000405356 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.81
NOLC1-202ENST00000405356 PP632Q6XCG6 107 aa3.7□□□□□ -1.82
NOLC1-202ENST00000405356 KRTAP9-8Q9BYQ0 159 aa3.68□□□□□ -1.82
NOLC1-202ENST00000405356 SPRR2GQ9BYE4 73 aa3.66□□□□□ -1.82
NOLC1-202ENST00000405356 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
NOLC1-202ENST00000405356 LCE2AQ5TA79 106 aaPredicted RBP3.55□□□□□ -1.84
NOLC1-202ENST00000405356 KRTAP9-3Q9BYQ3 159 aa3.55□□□□□ -1.84
NOLC1-202ENST00000405356 KRTAP19-8Q3LI54 63 aa3.53□□□□□ -1.85
NOLC1-202ENST00000405356 MT1BP07438 61 aa3.51□□□□□ -1.85
NOLC1-202ENST00000405356 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
NOLC1-202ENST00000405356 SPRR5A0A1B0GTR4 108 aa3.49□□□□□ -1.85
NOLC1-202ENST00000405356 LCE2BO14633 110 aa3.48□□□□□ -1.85
NOLC1-202ENST00000405356 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
NOLC1-202ENST00000405356 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
NOLC1-202ENST00000405356 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
NOLC1-202ENST00000405356 MT1XP80297 61 aa3.42□□□□□ -1.86
NOLC1-202ENST00000405356 KRTAP10-5P60370 271 aa3.4□□□□□ -1.86
NOLC1-202ENST00000405356 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
NOLC1-202ENST00000405356 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
NOLC1-202ENST00000405356 LCE2DQ5TA82 110 aaPredicted RBP3.32□□□□□ -1.88
NOLC1-202ENST00000405356 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
NOLC1-202ENST00000405356 USH2AO75445 5202 aa3.31□□□□□ -1.88
NOLC1-202ENST00000405356 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
NOLC1-202ENST00000405356 KRTAP9-2Q9BYQ4 174 aa3.28□□□□□ -1.88
NOLC1-202ENST00000405356 KRTAP4-8Q9BYQ9 185 aa3.28□□□□□ -1.88
NOLC1-202ENST00000405356 INE1O15225 51 aa3.26□□□□□ -1.89
NOLC1-202ENST00000405356 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
NOLC1-202ENST00000405356 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.89
NOLC1-202ENST00000405356 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
NOLC1-202ENST00000405356 SPRR2FQ96RM1 72 aa3.19□□□□□ -1.9
NOLC1-202ENST00000405356 KMT2DO14686 5537 aa3.16□□□□□ -1.9
NOLC1-202ENST00000405356 SSPOA2VEC9 5147 aa3.15□□□□□ -1.9
NOLC1-202ENST00000405356 FCGBPQ9Y6R7 5405 aaPredicted RBP3.06□□□□□ -1.92
NOLC1-202ENST00000405356 LCE3CQ5T5A8 94 aa3.04□□□□□ -1.92
NOLC1-202ENST00000405356 KRTAP9-6A0A140TA67 174 aa3.03□□□□□ -1.92
NOLC1-202ENST00000405356 KRTAP4-7Q9BYR0 210 aa3.02□□□□□ -1.93
NOLC1-202ENST00000405356 MT1EP04732 61 aa3.02□□□□□ -1.93
NOLC1-202ENST00000405356 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms