RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 RPL37P61927 97 aaKnown RBP9.22□□□□□ -0.93
CDK11A-208ENST00000404249 LINC01554Q52M75 96 aa9.21□□□□□ -0.94
CDK11A-208ENST00000404249 XP32Q5T750 250 aa9.17□□□□□ -0.94
CDK11A-208ENST00000404249 HSPG2P98160 4391 aa9.14□□□□□ -0.95
CDK11A-208ENST00000404249 KRTAP3-3Q9BYR6 98 aa9.14□□□□□ -0.95
CDK11A-208ENST00000404249 K7ERS5 55 aa9.07□□□□□ -0.96
CDK11A-208ENST00000404249 KRTAP10-6P60371 365 aaPredicted RBP9.07□□□□□ -0.96
CDK11A-208ENST00000404249 S4R3F8 94 aa9.07□□□□□ -0.96
CDK11A-208ENST00000404249 DMBT1Q9UGM3 2413 aaPredicted RBP9.05□□□□□ -0.96
CDK11A-208ENST00000404249 RYR1P21817 5038 aa9.04□□□□□ -0.96
CDK11A-208ENST00000404249 KRTAP17-1Q9BYP8 105 aa9.03□□□□□ -0.96
CDK11A-208ENST00000404249 J3QL48 77 aa9.01□□□□□ -0.97
CDK11A-208ENST00000404249 KRTAP3-2Q9BYR7 98 aa9.01□□□□□ -0.97
CDK11A-208ENST00000404249 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
CDK11A-208ENST00000404249 MT1HL1P0DM35 61 aa8.99□□□□□ -0.97
CDK11A-208ENST00000404249 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
CDK11A-208ENST00000404249 MYCBP2O75592 4640 aa8.96□□□□□ -0.97
CDK11A-208ENST00000404249 RYR3Q15413 4870 aa8.93□□□□□ -0.98
CDK11A-208ENST00000404249 A0A0D9SG42 100 aa8.91□□□□□ -0.98
CDK11A-208ENST00000404249 P0C880 135 aa8.89□□□□□ -0.99
CDK11A-208ENST00000404249 ROMO1P60602 79 aa8.86□□□□□ -0.99
CDK11A-208ENST00000404249 KIAA1109Q2LD37 5005 aa8.85□□□□□ -0.99
CDK11A-208ENST00000404249 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
CDK11A-208ENST00000404249 TPRXLQ17RH7 258 aa8.81□□□□□ -1
CDK11A-208ENST00000404249 LPAP08519 4548 aa8.73□□□□□ -1.01
CDK11A-208ENST00000404249 LRP2P98164 4655 aa8.71□□□□□ -1.02
CDK11A-208ENST00000404249 KRTAP12-2P59991 146 aa8.69□□□□□ -1.02
CDK11A-208ENST00000404249 KRTAP12-1P59990 96 aa8.63□□□□□ -1.03
CDK11A-208ENST00000404249 SEC61BP60468 96 aaKnown RBP8.61□□□□□ -1.03
CDK11A-208ENST00000404249 M0QZ58 72 aa8.61□□□□□ -1.03
CDK11A-208ENST00000404249 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
CDK11A-208ENST00000404249 EPPK1P58107 5090 aaKnown RBP8.6□□□□□ -1.03
CDK11A-208ENST00000404249 ABCA13Q86UQ4 5058 aa8.55□□□□□ -1.04
CDK11A-208ENST00000404249 KRTAP4-5Q9BYR2 181 aa8.55□□□□□ -1.04
CDK11A-208ENST00000404249 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
CDK11A-208ENST00000404249 R4GN34 69 aa8.4□□□□□ -1.06
CDK11A-208ENST00000404249 MUC17Q685J3 4493 aa8.39□□□□□ -1.07
CDK11A-208ENST00000404249 KRTAP4-1Q9BYQ7 146 aa8.37□□□□□ -1.07
CDK11A-208ENST00000404249 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
CDK11A-208ENST00000404249 KRTAP19-2Q3LHN2 52 aa8.23□□□□□ -1.09
CDK11A-208ENST00000404249 KRTAP15-1Q3LI76 137 aa8.2□□□□□ -1.1
CDK11A-208ENST00000404249 HERC2O95714 4834 aa8.14□□□□□ -1.11
CDK11A-208ENST00000404249 LUZP6Q538Z0 58 aa8.07□□□□□ -1.12
CDK11A-208ENST00000404249 NDUFAF8A1L188 74 aa7.98□□□□□ -1.13
CDK11A-208ENST00000404249 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
CDK11A-208ENST00000404249 FLGP20930 4061 aaPredicted RBP7.97□□□□□ -1.13
CDK11A-208ENST00000404249 BIRC6Q9NR09 4857 aa7.97□□□□□ -1.13
CDK11A-208ENST00000404249 MUC2Q02817 5179 aa7.9□□□□□ -1.15
CDK11A-208ENST00000404249 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
CDK11A-208ENST00000404249 PLAC4Q8WY50 150 aa7.84□□□□□ -1.15
CDK11A-208ENST00000404249 HERC1Q15751 4861 aa7.81□□□□□ -1.16
CDK11A-208ENST00000404249 HMCN2Q8NDA2 5059 aa7.74□□□□□ -1.17
CDK11A-208ENST00000404249 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
CDK11A-208ENST00000404249 LCE2CQ5TA81 110 aa7.72□□□□□ -1.17
CDK11A-208ENST00000404249 TNP1P09430 55 aa7.68□□□□□ -1.18
CDK11A-208ENST00000404249 SPRR2GQ9BYE4 73 aa7.6□□□□□ -1.19
CDK11A-208ENST00000404249 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
CDK11A-208ENST00000404249 KRTAP19-1Q8IUB9 90 aa7.56□□□□□ -1.2
CDK11A-208ENST00000404249 M0R2T5 61 aa7.54□□□□□ -1.2
CDK11A-208ENST00000404249 FAT4Q6V0I7 4981 aa7.53□□□□□ -1.2
CDK11A-208ENST00000404249 MT1HP80294 61 aa7.51□□□□□ -1.21
CDK11A-208ENST00000404249 RNF213Q63HN8 5207 aa7.43□□□□□ -1.22
CDK11A-208ENST00000404249 MT2AP02795 61 aa7.41□□□□□ -1.22
CDK11A-208ENST00000404249 MT1FP04733 61 aa7.41□□□□□ -1.22
CDK11A-208ENST00000404249 KRTAP10-10P60014 251 aa7.39□□□□□ -1.23
CDK11A-208ENST00000404249 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
CDK11A-208ENST00000404249 UBR4Q5T4S7 5183 aa7.34□□□□□ -1.23
CDK11A-208ENST00000404249 SPRR5A0A1B0GTR4 108 aa7.33□□□□□ -1.24
CDK11A-208ENST00000404249 LCE3AQ5TA76 89 aa7.28□□□□□ -1.24
CDK11A-208ENST00000404249 KRTAP19-8Q3LI54 63 aa7.27□□□□□ -1.25
CDK11A-208ENST00000404249 MT1BP07438 61 aa7.17□□□□□ -1.26
CDK11A-208ENST00000404249 KRTAP10-5P60370 271 aa7.13□□□□□ -1.27
CDK11A-208ENST00000404249 MT1XP80297 61 aa7.12□□□□□ -1.27
CDK11A-208ENST00000404249 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
CDK11A-208ENST00000404249 KRTAP9-3Q9BYQ3 159 aa7.03□□□□□ -1.28
CDK11A-208ENST00000404249 KRTAP10-12P60413 245 aa7□□□□□ -1.29
CDK11A-208ENST00000404249 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
CDK11A-208ENST00000404249 KRTAP10-7P60409 375 aaPredicted RBP6.92□□□□□ -1.3
CDK11A-208ENST00000404249 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
CDK11A-208ENST00000404249 LCE2BO14633 110 aa6.75□□□□□ -1.33
CDK11A-208ENST00000404249 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CDK11A-208ENST00000404249 LCE2AQ5TA79 106 aaPredicted RBP6.6□□□□□ -1.35
CDK11A-208ENST00000404249 LCE3CQ5T5A8 94 aa6.52□□□□□ -1.36
CDK11A-208ENST00000404249 USH2AO75445 5202 aa6.5□□□□□ -1.37
CDK11A-208ENST00000404249 KRTAP4-8A0A0G2JLE6 195 aa6.47□□□□□ -1.37
CDK11A-208ENST00000404249 KRTAP4-8Q9BYQ9 185 aa6.47□□□□□ -1.37
CDK11A-208ENST00000404249 KMT2DO14686 5537 aa6.44□□□□□ -1.38
CDK11A-208ENST00000404249 INE1O15225 51 aa6.44□□□□□ -1.38
CDK11A-208ENST00000404249 KRTAP19-7Q3SYF9 63 aa6.35□□□□□ -1.39
CDK11A-208ENST00000404249 KRTAP9-6A8MVA2 160 aa6.28□□□□□ -1.4
CDK11A-208ENST00000404249 KRTAP4-7Q9BYR0 210 aa6.2□□□□□ -1.42
CDK11A-208ENST00000404249 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
CDK11A-208ENST00000404249 MT1LQ93083 61 aa6.17□□□□□ -1.42
CDK11A-208ENST00000404249 MT1EP04732 61 aa6.17□□□□□ -1.42
CDK11A-208ENST00000404249 KRTAP19-4Q3LI73 84 aa6.17□□□□□ -1.42
CDK11A-208ENST00000404249 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
CDK11A-208ENST00000404249 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
CDK11A-208ENST00000404249 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
CDK11A-208ENST00000404249 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
CDK11A-208ENST00000404249 LCE2DQ5TA82 110 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms