RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 GTF2H5Q6ZYL4 71 aa2.75□□□□□ -1.97
HMGB1P20-201ENST00000402555 FCGBPQ9Y6R7 5405 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P20-201ENST00000402555 CXCL6P80162 114 aa2.74□□□□□ -1.97
HMGB1P20-201ENST00000402555 C4orf26Q17RF5 130 aa2.74□□□□□ -1.97
HMGB1P20-201ENST00000402555 F8W1H4 67 aa2.72□□□□□ -1.97
HMGB1P20-201ENST00000402555 MT3P25713 68 aa2.72□□□□□ -1.97
HMGB1P20-201ENST00000402555 C5orf47Q569G3 176 aa2.69□□□□□ -1.98
HMGB1P20-201ENST00000402555 C1orf64Q8NEQ6 169 aa2.68□□□□□ -1.98
HMGB1P20-201ENST00000402555 TP53AIP1Q9HCN2 124 aa2.67□□□□□ -1.98
HMGB1P20-201ENST00000402555 S4R3F8 94 aa2.67□□□□□ -1.98
HMGB1P20-201ENST00000402555 KRTAP19-6Q3LI70 58 aa2.66□□□□□ -1.98
HMGB1P20-201ENST00000402555 LCA10Q71F78 164 aa2.65□□□□□ -1.99
HMGB1P20-201ENST00000402555 CYP4F30PQ9H0H9 118 aa2.65□□□□□ -1.99
HMGB1P20-201ENST00000402555 A0A087WVE0 104 aa2.64□□□□□ -1.99
HMGB1P20-201ENST00000402555 FAM236AA0A1B0GUQ0 79 aa2.64□□□□□ -1.99
HMGB1P20-201ENST00000402555 FAM236BA0A1B0GV22 79 aa2.64□□□□□ -1.99
HMGB1P20-201ENST00000402555 ACYP1P07311 99 aa2.64□□□□□ -1.99
HMGB1P20-201ENST00000402555 HIST1H4AP62805 103 aaKnown RBP2.64□□□□□ -1.99
HMGB1P20-201ENST00000402555 TRAV22A0A0B4J277 110 aa2.63□□□□□ -1.99
HMGB1P20-201ENST00000402555 A0A1B0GV90 55 aa2.63□□□□□ -1.99
HMGB1P20-201ENST00000402555 FAM240AA0A1B0GVK7 77 aa2.63□□□□□ -1.99
HMGB1P20-201ENST00000402555 CSAG1Q6PB30 78 aa2.63□□□□□ -1.99
HMGB1P20-201ENST00000402555 LOC101927531A0A1B0GV80 90 aa2.62□□□□□ -1.99
HMGB1P20-201ENST00000402555 ATP5EP2Q5VTU8 51 aa2.62□□□□□ -1.99
HMGB1P20-201ENST00000402555 H0Y9P7 68 aa2.61□□□□□ -1.99
HMGB1P20-201ENST00000402555 UQCRQO14949 82 aa2.6□□□□□ -1.99
HMGB1P20-201ENST00000402555 LINC00643Q86TS7 51 aa2.6□□□□□ -1.99
HMGB1P20-201ENST00000402555 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
HMGB1P20-201ENST00000402555 SYNE2Q8WXH0 6885 aaKnown RBP2.6□□□□□ -1.99
HMGB1P20-201ENST00000402555 MT1BP07438 61 aa2.59□□□□□ -1.99
HMGB1P20-201ENST00000402555 KLKP1Q107X0 134 aa2.58□□□□□ -2
HMGB1P20-201ENST00000402555 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
HMGB1P20-201ENST00000402555 ATOX1O00244 68 aa2.57□□□□□ -2
HMGB1P20-201ENST00000402555 KRTAP10-5P60370 271 aa2.57□□□□□ -2
HMGB1P20-201ENST00000402555 KRTAP19-8Q3LI54 63 aa2.57□□□□□ -2
HMGB1P20-201ENST00000402555 Q5VV11 94 aa2.57□□□□□ -2
HMGB1P20-201ENST00000402555 LINC00208Q96KT6 92 aa2.57□□□□□ -2
HMGB1P20-201ENST00000402555 OCR1Q9BZK8 76 aa2.56□□□□□ -2
HMGB1P20-201ENST00000402555 KRTAP5-1Q6L8H4 278 aa2.55□□□□□ -2
HMGB1P20-201ENST00000402555 A6NN06 94 aa2.54□□□□□ -2
HMGB1P20-201ENST00000402555 NDUFC1O43677 76 aa2.54□□□□□ -2
HMGB1P20-201ENST00000402555 MP68P56378 58 aa2.53□□□□□ -2
HMGB1P20-201ENST00000402555 IMUPQ9GZP8 106 aa2.53□□□□□ -2
HMGB1P20-201ENST00000402555 A8MUN3 132 aa2.52□□□□□ -2.01
HMGB1P20-201ENST00000402555 J3QR89 54 aa2.52□□□□□ -2.01
HMGB1P20-201ENST00000402555 KRTAP6-3Q3LI67 103 aa2.52□□□□□ -2.01
HMGB1P20-201ENST00000402555 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
HMGB1P20-201ENST00000402555 CRIPTQ9P021 101 aa2.51□□□□□ -2.01
HMGB1P20-201ENST00000402555 H0YAA0 97 aa2.5□□□□□ -2.01
HMGB1P20-201ENST00000402555 SCGB1A1P11684 91 aa2.5□□□□□ -2.01
HMGB1P20-201ENST00000402555 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
HMGB1P20-201ENST00000402555 H3BPC8 53 aa2.48□□□□□ -2.01
HMGB1P20-201ENST00000402555 MT-ATP8P03928 68 aa2.48□□□□□ -2.01
HMGB1P20-201ENST00000402555 P0C880 135 aa2.47□□□□□ -2.01
HMGB1P20-201ENST00000402555 DMAC1Q96GE9 116 aa2.47□□□□□ -2.01
HMGB1P20-201ENST00000402555 KRTAP5-4Q6L8H1 288 aa2.46□□□□□ -2.02
HMGB1P20-201ENST00000402555 NEBP20929 6669 aa2.45□□□□□ -2.02
HMGB1P20-201ENST00000402555 KRTAP10-12P60413 245 aa2.45□□□□□ -2.02
HMGB1P20-201ENST00000402555 LCE1FQ5T754 118 aa2.45□□□□□ -2.02
HMGB1P20-201ENST00000402555 MUC12Q9UKN1 5478 aa2.45□□□□□ -2.02
HMGB1P20-201ENST00000402555 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
HMGB1P20-201ENST00000402555 KMT2DO14686 5537 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 TRAV7A0A075B6U4 112 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 K7ERU9 68 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 M0QZ58 72 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 MT1XP80297 61 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 R4GN34 69 aa2.43□□□□□ -2.02
HMGB1P20-201ENST00000402555 PLAC4Q8WY50 150 aa2.42□□□□□ -2.02
HMGB1P20-201ENST00000402555 MDN1Q9NU22 5596 aa2.41□□□□□ -2.02
HMGB1P20-201ENST00000402555 KRTAP5-9P26371 169 aa2.41□□□□□ -2.02
HMGB1P20-201ENST00000402555 LINC01554Q52M75 96 aa2.41□□□□□ -2.02
HMGB1P20-201ENST00000402555 C20orf197Q8N268 126 aa2.41□□□□□ -2.02
HMGB1P20-201ENST00000402555 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
HMGB1P20-201ENST00000402555 ACYP2P14621 99 aa2.4□□□□□ -2.03
HMGB1P20-201ENST00000402555 SMIM20Q8N5G0 67 aa2.4□□□□□ -2.03
HMGB1P20-201ENST00000402555 PRO2289Q9P1D8 64 aa2.39□□□□□ -2.03
HMGB1P20-201ENST00000402555 CHKB-CPT1BH3BT56 60 aa2.37□□□□□ -2.03
HMGB1P20-201ENST00000402555 PRAC1Q96KF2 57 aa2.37□□□□□ -2.03
HMGB1P20-201ENST00000402555 SPTSSBQ8NFR3 76 aa2.36□□□□□ -2.03
HMGB1P20-201ENST00000402555 SPRR2FQ96RM1 72 aa2.36□□□□□ -2.03
HMGB1P20-201ENST00000402555 KRTAP12-2P59991 146 aa2.34□□□□□ -2.03
HMGB1P20-201ENST00000402555 KRTAP20-1Q3LI63 56 aa2.34□□□□□ -2.03
HMGB1P20-201ENST00000402555 KRTAP8-1Q8IUC2 63 aa2.34□□□□□ -2.03
HMGB1P20-201ENST00000402555 SERP2Q8N6R1 65 aa2.34□□□□□ -2.03
HMGB1P20-201ENST00000402555 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
HMGB1P20-201ENST00000402555 SPRR2EP22531 72 aa2.32□□□□□ -2.04
HMGB1P20-201ENST00000402555 SPRR2BP35325 72 aa2.32□□□□□ -2.04
HMGB1P20-201ENST00000402555 SPRR2AP35326 72 aa2.32□□□□□ -2.04
HMGB1P20-201ENST00000402555 KRTAP13-4Q3LI77 160 aa2.32□□□□□ -2.04
HMGB1P20-201ENST00000402555 LCE3CQ5T5A8 94 aa2.3□□□□□ -2.04
HMGB1P20-201ENST00000402555 COA5Q86WW8 74 aa2.3□□□□□ -2.04
HMGB1P20-201ENST00000402555 OBSCNQ5VST9 7968 aa2.29□□□□□ -2.04
HMGB1P20-201ENST00000402555 CYSTM1Q9H1C7 97 aa2.28□□□□□ -2.04
HMGB1P20-201ENST00000402555 NDUFAF8A1L188 74 aa2.27□□□□□ -2.05
HMGB1P20-201ENST00000402555 KRTAP2-3P0C7H8 128 aa2.27□□□□□ -2.05
HMGB1P20-201ENST00000402555 COX7CP15954 63 aa2.27□□□□□ -2.05
HMGB1P20-201ENST00000402555 KRTAP2-4Q9BYR9 128 aa2.27□□□□□ -2.05
HMGB1P20-201ENST00000402555 A0A0D9SG42 100 aa2.25□□□□□ -2.05
HMGB1P20-201ENST00000402555 CAMK2N1Q7Z7J9 78 aa2.25□□□□□ -2.05
HMGB1P20-201ENST00000402555 H7BZZ5 65 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms