RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 TPRXLQ17RH7 258 aa13.64□□□□□ -0.23
CGREF1-203ENST00000402394 UQCR11O14957 56 aa13.63□□□□□ -0.23
CGREF1-203ENST00000402394 SEC61GP60059 68 aa13.63□□□□□ -0.23
CGREF1-203ENST00000402394 SPATA8Q6RVD6 105 aa13.61□□□□□ -0.23
CGREF1-203ENST00000402394 A6NN06 94 aa13.57□□□□□ -0.24
CGREF1-203ENST00000402394 MIR22HGQ0VDD5 57 aa13.54□□□□□ -0.24
CGREF1-203ENST00000402394 J3QL48 77 aa13.5□□□□□ -0.25
CGREF1-203ENST00000402394 KRTAP3-3Q9BYR6 98 aa13.41□□□□□ -0.26
CGREF1-203ENST00000402394 KTN1-AS1Q86SY8 53 aa13.39□□□□□ -0.27
CGREF1-203ENST00000402394 S4R3F8 94 aa13.35□□□□□ -0.27
CGREF1-203ENST00000402394 A0A1B0GU33 70 aa13.32□□□□□ -0.28
CGREF1-203ENST00000402394 LRP2P98164 4655 aa13.31□□□□□ -0.28
CGREF1-203ENST00000402394 H1FX-AS1Q4G0G2 97 aa13.31□□□□□ -0.28
CGREF1-203ENST00000402394 H0YAA0 97 aa13.27□□□□□ -0.28
CGREF1-203ENST00000402394 LPAP08519 4548 aa13.22□□□□□ -0.29
CGREF1-203ENST00000402394 PCLOQ9Y6V0 5065 aa13.2□□□□□ -0.3
CGREF1-203ENST00000402394 RBM12B-AS1Q9P1G2 102 aa13.19□□□□□ -0.3
CGREF1-203ENST00000402394 KRTAP10-6P60371 365 aaPredicted RBP13.13□□□□□ -0.31
CGREF1-203ENST00000402394 SEC61BP60468 96 aaKnown RBP13.12□□□□□ -0.31
CGREF1-203ENST00000402394 KRTAP3-2Q9BYR7 98 aa13.1□□□□□ -0.31
CGREF1-203ENST00000402394 CSAG1Q6PB30 78 aa12.96□□□□□ -0.34
CGREF1-203ENST00000402394 HERC1Q15751 4861 aa12.92□□□□□ -0.34
CGREF1-203ENST00000402394 P0C880 135 aa12.92□□□□□ -0.34
CGREF1-203ENST00000402394 KRTAP4-1Q9BYQ7 146 aa12.89□□□□□ -0.35
CGREF1-203ENST00000402394 KRTAP13-4Q3LI77 160 aa12.88□□□□□ -0.35
CGREF1-203ENST00000402394 ADM2Q7Z4H4 148 aa12.86□□□□□ -0.35
CGREF1-203ENST00000402394 MUC17Q685J3 4493 aa12.82□□□□□ -0.36
CGREF1-203ENST00000402394 PRAC1Q96KF2 57 aa12.8□□□□□ -0.36
CGREF1-203ENST00000402394 K7ERS5 55 aa12.76□□□□□ -0.37
CGREF1-203ENST00000402394 HMCN2Q8NDA2 5059 aa12.72□□□□□ -0.37
CGREF1-203ENST00000402394 A0A0D9SG42 100 aa12.68□□□□□ -0.38
CGREF1-203ENST00000402394 KRTAP19-2Q3LHN2 52 aa12.66□□□□□ -0.38
CGREF1-203ENST00000402394 M0QZ58 72 aa12.58□□□□□ -0.4
CGREF1-203ENST00000402394 KRTAP12-2P59991 146 aa12.43□□□□□ -0.42
CGREF1-203ENST00000402394 KRTAP12-1P59990 96 aa12.41□□□□□ -0.42
CGREF1-203ENST00000402394 ROMO1P60602 79 aa12.39□□□□□ -0.43
CGREF1-203ENST00000402394 MUC2Q02817 5179 aa12.34□□□□□ -0.43
CGREF1-203ENST00000402394 R4GN34 69 aa12.33□□□□□ -0.44
CGREF1-203ENST00000402394 LINC01554Q52M75 96 aa12.32□□□□□ -0.44
CGREF1-203ENST00000402394 KRTAP25-1Q3LHN0 102 aa12.31□□□□□ -0.44
CGREF1-203ENST00000402394 SPINT4Q6UDR6 99 aa12.31□□□□□ -0.44
CGREF1-203ENST00000402394 FLGP20930 4061 aaPredicted RBP12.27□□□□□ -0.45
CGREF1-203ENST00000402394 LORP23490 312 aaPredicted RBP12.26□□□□□ -0.45
CGREF1-203ENST00000402394 UBR4Q5T4S7 5183 aa12.19□□□□□ -0.46
CGREF1-203ENST00000402394 CRIPTQ9P021 101 aa12.12□□□□□ -0.47
CGREF1-203ENST00000402394 LCE2CQ5TA81 110 aa12.09□□□□□ -0.47
CGREF1-203ENST00000402394 RNF213Q63HN8 5207 aa12.04□□□□□ -0.48
CGREF1-203ENST00000402394 C10orf95Q9H7T3 257 aa11.84□□□□□ -0.51
CGREF1-203ENST00000402394 FAT4Q6V0I7 4981 aa11.81□□□□□ -0.52
CGREF1-203ENST00000402394 MT1HP80294 61 aa11.78□□□□□ -0.52
CGREF1-203ENST00000402394 M0R2T5 61 aa11.69□□□□□ -0.54
CGREF1-203ENST00000402394 CAMK2N1Q7Z7J9 78 aa11.62□□□□□ -0.55
CGREF1-203ENST00000402394 SPRR2GQ9BYE4 73 aa11.57□□□□□ -0.56
CGREF1-203ENST00000402394 KRTAP19-1Q8IUB9 90 aa11.5□□□□□ -0.57
CGREF1-203ENST00000402394 MT2AP02795 61 aa11.48□□□□□ -0.57
CGREF1-203ENST00000402394 KRTAP9-8Q9BYQ0 159 aa11.45□□□□□ -0.58
CGREF1-203ENST00000402394 MT1FP04733 61 aa11.45□□□□□ -0.58
CGREF1-203ENST00000402394 KRTAP10-10P60014 251 aa11.39□□□□□ -0.59
CGREF1-203ENST00000402394 PLAC4Q8WY50 150 aa11.3□□□□□ -0.6
CGREF1-203ENST00000402394 PP632Q6XCG6 107 aa11.21□□□□□ -0.62
CGREF1-203ENST00000402394 LCE2AQ5TA79 106 aaPredicted RBP11.2□□□□□ -0.62
CGREF1-203ENST00000402394 TNP1P09430 55 aa11.17□□□□□ -0.62
CGREF1-203ENST00000402394 KRTAP19-8Q3LI54 63 aa11.16□□□□□ -0.62
CGREF1-203ENST00000402394 KRTAP15-1Q3LI76 137 aa11.13□□□□□ -0.63
CGREF1-203ENST00000402394 KRTAP23-1A1A580 65 aa11.03□□□□□ -0.64
CGREF1-203ENST00000402394 KRTAP9-3Q9BYQ3 159 aa11.01□□□□□ -0.65
CGREF1-203ENST00000402394 MT1BP07438 61 aa10.98□□□□□ -0.65
CGREF1-203ENST00000402394 KRTAP10-5P60370 271 aa10.78□□□□□ -0.68
CGREF1-203ENST00000402394 MT1XP80297 61 aa10.78□□□□□ -0.68
CGREF1-203ENST00000402394 LCE3AQ5TA76 89 aa10.62□□□□□ -0.71
CGREF1-203ENST00000402394 LCE2BO14633 110 aa10.6□□□□□ -0.71
CGREF1-203ENST00000402394 NDUFAF8A1L188 74 aa10.58□□□□□ -0.72
CGREF1-203ENST00000402394 H3BS24 57 aa10.56□□□□□ -0.72
CGREF1-203ENST00000402394 PRO2289Q9P1D8 64 aa10.5□□□□□ -0.73
CGREF1-203ENST00000402394 KRTAP8-1Q8IUC2 63 aa10.43□□□□□ -0.74
CGREF1-203ENST00000402394 KRTAP10-12P60413 245 aa10.41□□□□□ -0.74
CGREF1-203ENST00000402394 KRTAP10-7P60409 375 aaPredicted RBP10.4□□□□□ -0.74
CGREF1-203ENST00000402394 SPRR5A0A1B0GTR4 108 aa10.27□□□□□ -0.77
CGREF1-203ENST00000402394 USH2AO75445 5202 aa10.24□□□□□ -0.77
CGREF1-203ENST00000402394 LUZP6Q538Z0 58 aa10.24□□□□□ -0.77
CGREF1-203ENST00000402394 KRTAP12-3P60328 96 aa10.17□□□□□ -0.78
CGREF1-203ENST00000402394 LCE2DQ5TA82 110 aaPredicted RBP10.14□□□□□ -0.79
CGREF1-203ENST00000402394 FSIP2Q5CZC0 6907 aa9.95□□□□□ -0.82
CGREF1-203ENST00000402394 SSPOA2VEC9 5147 aa9.92□□□□□ -0.82
CGREF1-203ENST00000402394 KRTAP19-5Q3LI72 72 aa9.9□□□□□ -0.83
CGREF1-203ENST00000402394 KRTAP19-6Q3LI70 58 aa9.87□□□□□ -0.83
CGREF1-203ENST00000402394 KRTAP4-8A0A0G2JLE6 195 aa9.83□□□□□ -0.84
CGREF1-203ENST00000402394 KRTAP4-8Q9BYQ9 185 aa9.83□□□□□ -0.84
CGREF1-203ENST00000402394 KRTAP9-2Q9BYQ4 174 aa9.78□□□□□ -0.84
CGREF1-203ENST00000402394 KMT2DO14686 5537 aa9.68□□□□□ -0.86
CGREF1-203ENST00000402394 KRTAP19-7Q3SYF9 63 aa9.62□□□□□ -0.87
CGREF1-203ENST00000402394 LCE3CQ5T5A8 94 aa9.55□□□□□ -0.88
CGREF1-203ENST00000402394 FCGBPQ9Y6R7 5405 aaPredicted RBP9.5□□□□□ -0.89
CGREF1-203ENST00000402394 A0A0A0MQY5 61 aa9.44□□□□□ -0.9
CGREF1-203ENST00000402394 CRCT1Q9UGL9 99 aa9.44□□□□□ -0.9
CGREF1-203ENST00000402394 MT1EP04732 61 aa9.39□□□□□ -0.91
CGREF1-203ENST00000402394 KRTAP19-4Q3LI73 84 aa9.34□□□□□ -0.91
CGREF1-203ENST00000402394 MT1LQ93083 61 aa9.3□□□□□ -0.92
CGREF1-203ENST00000402394 KRTAP4-7Q9BYR0 210 aa9.16□□□□□ -0.94
CGREF1-203ENST00000402394 KRTAP9-6A8MVA2 160 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms