RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 C9orf92A6NGG3 77 aa5.86□□□□□ -1.47
LINC00649-202ENST00000400353 HERC2O95714 4834 aa5.86□□□□□ -1.47
LINC00649-202ENST00000400353 MYCBP2O75592 4640 aa5.86□□□□□ -1.47
LINC00649-202ENST00000400353 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.48
LINC00649-202ENST00000400353 KRTAP10-8P60410 259 aa5.83□□□□□ -1.48
LINC00649-202ENST00000400353 UQCR11O14957 56 aa5.82□□□□□ -1.48
LINC00649-202ENST00000400353 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
LINC00649-202ENST00000400353 Q8N1X5 172 aa5.81□□□□□ -1.48
LINC00649-202ENST00000400353 FLG2Q5D862 2391 aaPredicted RBP5.8□□□□□ -1.48
LINC00649-202ENST00000400353 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
LINC00649-202ENST00000400353 A0A1B0GU69 56 aa5.79□□□□□ -1.48
LINC00649-202ENST00000400353 KRTAP4-5Q9BYR2 181 aa5.79□□□□□ -1.48
LINC00649-202ENST00000400353 NDUFAF8A1L188 74 aa5.77□□□□□ -1.49
LINC00649-202ENST00000400353 K7ERS5 55 aa5.76□□□□□ -1.49
LINC00649-202ENST00000400353 PCLOQ9Y6V0 5065 aa5.75□□□□□ -1.49
LINC00649-202ENST00000400353 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
LINC00649-202ENST00000400353 TNXBP22105 4242 aa5.72□□□□□ -1.49
LINC00649-202ENST00000400353 LCE2DQ5TA82 110 aaPredicted RBP5.71□□□□□ -1.49
LINC00649-202ENST00000400353 RPL37P61927 97 aaKnown RBP5.7□□□□□ -1.5
LINC00649-202ENST00000400353 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
LINC00649-202ENST00000400353 KRTAP15-1Q3LI76 137 aa5.67□□□□□ -1.5
LINC00649-202ENST00000400353 KRTAP3-1Q9BYR8 98 aa5.67□□□□□ -1.5
LINC00649-202ENST00000400353 XP32Q5T750 250 aa5.65□□□□□ -1.51
LINC00649-202ENST00000400353 MT1HL1P0DM35 61 aa5.64□□□□□ -1.51
LINC00649-202ENST00000400353 DMBT1Q9UGM3 2413 aaPredicted RBP5.63□□□□□ -1.51
LINC00649-202ENST00000400353 SPINT4Q6UDR6 99 aa5.57□□□□□ -1.52
LINC00649-202ENST00000400353 HERC1Q15751 4861 aa5.56□□□□□ -1.52
LINC00649-202ENST00000400353 TPRXLQ17RH7 258 aa5.55□□□□□ -1.52
LINC00649-202ENST00000400353 A0A1B0GU33 70 aa5.51□□□□□ -1.53
LINC00649-202ENST00000400353 H1FX-AS1Q4G0G2 97 aa5.51□□□□□ -1.53
LINC00649-202ENST00000400353 S4R3F8 94 aa5.49□□□□□ -1.53
LINC00649-202ENST00000400353 H0YAA0 97 aa5.45□□□□□ -1.54
LINC00649-202ENST00000400353 KRTAP3-3Q9BYR6 98 aa5.45□□□□□ -1.54
LINC00649-202ENST00000400353 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
LINC00649-202ENST00000400353 LPAP08519 4548 aa5.44□□□□□ -1.54
LINC00649-202ENST00000400353 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
LINC00649-202ENST00000400353 LRP2P98164 4655 aa5.37□□□□□ -1.55
LINC00649-202ENST00000400353 HMCN2Q8NDA2 5059 aa5.37□□□□□ -1.55
LINC00649-202ENST00000400353 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
LINC00649-202ENST00000400353 CRIPTQ9P021 101 aa5.35□□□□□ -1.55
LINC00649-202ENST00000400353 KRTAP13-4Q3LI77 160 aa5.24□□□□□ -1.57
LINC00649-202ENST00000400353 MUC2Q02817 5179 aa5.24□□□□□ -1.57
LINC00649-202ENST00000400353 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
LINC00649-202ENST00000400353 M0QZ58 72 aa5.21□□□□□ -1.58
LINC00649-202ENST00000400353 A0A0D9SG42 100 aa5.2□□□□□ -1.58
LINC00649-202ENST00000400353 RNF213Q63HN8 5207 aa5.16□□□□□ -1.58
LINC00649-202ENST00000400353 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
LINC00649-202ENST00000400353 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
LINC00649-202ENST00000400353 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
LINC00649-202ENST00000400353 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
LINC00649-202ENST00000400353 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
LINC00649-202ENST00000400353 C10orf95Q9H7T3 257 aa5.07□□□□□ -1.6
LINC00649-202ENST00000400353 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
LINC00649-202ENST00000400353 R4GN34 69 aa5.06□□□□□ -1.6
LINC00649-202ENST00000400353 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
LINC00649-202ENST00000400353 PLAC4Q8WY50 150 aa4.98□□□□□ -1.61
LINC00649-202ENST00000400353 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
LINC00649-202ENST00000400353 LORP23490 312 aaPredicted RBP4.93□□□□□ -1.62
LINC00649-202ENST00000400353 FLGP20930 4061 aaPredicted RBP4.84□□□□□ -1.63
LINC00649-202ENST00000400353 LCE2CQ5TA81 110 aa4.83□□□□□ -1.64
LINC00649-202ENST00000400353 INE1O15225 51 aa4.76□□□□□ -1.65
LINC00649-202ENST00000400353 MT1HP80294 61 aa4.74□□□□□ -1.65
LINC00649-202ENST00000400353 M0R2T5 61 aa4.73□□□□□ -1.65
LINC00649-202ENST00000400353 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
LINC00649-202ENST00000400353 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
LINC00649-202ENST00000400353 LCE2BO14633 110 aa4.66□□□□□ -1.66
LINC00649-202ENST00000400353 TNP1P09430 55 aa4.63□□□□□ -1.67
LINC00649-202ENST00000400353 LCE2AQ5TA79 106 aaPredicted RBP4.63□□□□□ -1.67
LINC00649-202ENST00000400353 KRTAP19-1Q8IUB9 90 aa4.63□□□□□ -1.67
LINC00649-202ENST00000400353 MT2AP02795 61 aa4.62□□□□□ -1.67
LINC00649-202ENST00000400353 KRTAP10-10P60014 251 aa4.61□□□□□ -1.67
LINC00649-202ENST00000400353 MT1FP04733 61 aa4.59□□□□□ -1.67
LINC00649-202ENST00000400353 KRTAP9-8Q9BYQ0 159 aa4.59□□□□□ -1.67
LINC00649-202ENST00000400353 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
LINC00649-202ENST00000400353 KRTAP19-8Q3LI54 63 aa4.54□□□□□ -1.68
LINC00649-202ENST00000400353 MT1BP07438 61 aa4.42□□□□□ -1.7
LINC00649-202ENST00000400353 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
LINC00649-202ENST00000400353 FSIP2Q5CZC0 6907 aa4.39□□□□□ -1.71
LINC00649-202ENST00000400353 USH2AO75445 5202 aa4.37□□□□□ -1.71
LINC00649-202ENST00000400353 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
LINC00649-202ENST00000400353 MT1XP80297 61 aa4.35□□□□□ -1.71
LINC00649-202ENST00000400353 KRTAP9-2Q9BYQ4 174 aa4.35□□□□□ -1.71
LINC00649-202ENST00000400353 LCE3AQ5TA76 89 aa4.33□□□□□ -1.72
LINC00649-202ENST00000400353 KRTAP8-1Q8IUC2 63 aa4.28□□□□□ -1.72
LINC00649-202ENST00000400353 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
LINC00649-202ENST00000400353 SSPOA2VEC9 5147 aa4.21□□□□□ -1.74
LINC00649-202ENST00000400353 KRTAP10-7P60409 375 aaPredicted RBP4.18□□□□□ -1.74
LINC00649-202ENST00000400353 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
LINC00649-202ENST00000400353 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
LINC00649-202ENST00000400353 CRCT1Q9UGL9 99 aa4.11□□□□□ -1.75
LINC00649-202ENST00000400353 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
LINC00649-202ENST00000400353 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
LINC00649-202ENST00000400353 FCGBPQ9Y6R7 5405 aaPredicted RBP4.04□□□□□ -1.76
LINC00649-202ENST00000400353 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
LINC00649-202ENST00000400353 KRTAP19-5Q3LI72 72 aa4.01□□□□□ -1.77
LINC00649-202ENST00000400353 KMT2DO14686 5537 aa3.97□□□□□ -1.77
LINC00649-202ENST00000400353 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
LINC00649-202ENST00000400353 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
LINC00649-202ENST00000400353 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
LINC00649-202ENST00000400353 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms