RNA–Protein interactions for RNA: ENST00000399878.7

SEL1L3-202, Transcript of SEL1L family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEL1L3, Length 4,520 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L3-202ENST00000399878 C10orf95Q9H7T3 257 aa8.87□□□□□ -0.99
SEL1L3-202ENST00000399878 RYR1P21817 5038 aa8.87□□□□□ -0.99
SEL1L3-202ENST00000399878 KRTAP25-1Q3LHN0 102 aa8.86□□□□□ -0.99
SEL1L3-202ENST00000399878 LUZP6Q538Z0 58 aa8.85□□□□□ -0.99
SEL1L3-202ENST00000399878 DNAH2Q9P225 4427 aa8.84□□□□□ -0.99
SEL1L3-202ENST00000399878 CMYA5Q8N3K9 4069 aa8.83□□□□□ -1
SEL1L3-202ENST00000399878 ALMS1Q8TCU4 4167 aa8.82□□□□□ -1
SEL1L3-202ENST00000399878 DNAH3Q8TD57 4116 aa8.77□□□□□ -1.01
SEL1L3-202ENST00000399878 DNAH7Q8WXX0 4024 aa8.75□□□□□ -1.01
SEL1L3-202ENST00000399878 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
SEL1L3-202ENST00000399878 RYR3Q15413 4870 aa8.69□□□□□ -1.02
SEL1L3-202ENST00000399878 DYNC2H1Q8NCM8 4307 aaKnown RBP8.66□□□□□ -1.02
SEL1L3-202ENST00000399878 SACSQ9NZJ4 4579 aa8.66□□□□□ -1.02
SEL1L3-202ENST00000399878 TNP1P09430 55 aa8.65□□□□□ -1.02
SEL1L3-202ENST00000399878 DNAH6Q9C0G6 4158 aa8.64□□□□□ -1.03
SEL1L3-202ENST00000399878 VPS13BQ7Z7G8 4022 aa8.63□□□□□ -1.03
SEL1L3-202ENST00000399878 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
SEL1L3-202ENST00000399878 KRTAP13-4Q3LI77 160 aa8.63□□□□□ -1.03
SEL1L3-202ENST00000399878 HYDINQ4G0P3 5121 aa8.63□□□□□ -1.03
SEL1L3-202ENST00000399878 KRTAP10-6P60371 365 aaPredicted RBP8.61□□□□□ -1.03
SEL1L3-202ENST00000399878 FAT3Q8TDW7 4589 aa8.59□□□□□ -1.03
SEL1L3-202ENST00000399878 LRP1Q07954 4544 aaKnown RBP8.59□□□□□ -1.03
SEL1L3-202ENST00000399878 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
SEL1L3-202ENST00000399878 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
SEL1L3-202ENST00000399878 FRAS1Q86XX4 4008 aa8.55□□□□□ -1.04
SEL1L3-202ENST00000399878 FAT2Q9NYQ8 4349 aa8.53□□□□□ -1.04
SEL1L3-202ENST00000399878 KRTAP17-1Q9BYP8 105 aa8.51□□□□□ -1.05
SEL1L3-202ENST00000399878 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
SEL1L3-202ENST00000399878 PKHD1P08F94 4074 aa8.48□□□□□ -1.05
SEL1L3-202ENST00000399878 KMT2CQ8NEZ4 4911 aaKnown RBP8.45□□□□□ -1.06
SEL1L3-202ENST00000399878 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
SEL1L3-202ENST00000399878 HECTD4Q9Y4D8 3996 aa8.41□□□□□ -1.06
SEL1L3-202ENST00000399878 RYR2Q92736 4967 aa8.39□□□□□ -1.07
SEL1L3-202ENST00000399878 NDUFAF8A1L188 74 aa8.35□□□□□ -1.07
SEL1L3-202ENST00000399878 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
SEL1L3-202ENST00000399878 A0A0A0MQY5 61 aa8.26□□□□□ -1.09
SEL1L3-202ENST00000399878 HERC2O95714 4834 aa8.23□□□□□ -1.09
SEL1L3-202ENST00000399878 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
SEL1L3-202ENST00000399878 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
SEL1L3-202ENST00000399878 PP632Q6XCG6 107 aa8.21□□□□□ -1.09
SEL1L3-202ENST00000399878 LRP2P98164 4655 aa8.19□□□□□ -1.1
SEL1L3-202ENST00000399878 HSPG2P98160 4391 aa8.03□□□□□ -1.12
SEL1L3-202ENST00000399878 PKD1P98161 4303 aa8.01□□□□□ -1.13
SEL1L3-202ENST00000399878 EPPK1P58107 5090 aaKnown RBP7.99□□□□□ -1.13
SEL1L3-202ENST00000399878 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
SEL1L3-202ENST00000399878 LPAP08519 4548 aa7.84□□□□□ -1.15
SEL1L3-202ENST00000399878 PCLOQ9Y6V0 5065 aa7.83□□□□□ -1.16
SEL1L3-202ENST00000399878 ABCA13Q86UQ4 5058 aa7.78□□□□□ -1.16
SEL1L3-202ENST00000399878 MT1HP80294 61 aa7.77□□□□□ -1.17
SEL1L3-202ENST00000399878 MT2AP02795 61 aa7.64□□□□□ -1.19
SEL1L3-202ENST00000399878 KRTAP10-12P60413 245 aa7.59□□□□□ -1.19
SEL1L3-202ENST00000399878 MT1FP04733 61 aa7.59□□□□□ -1.2
SEL1L3-202ENST00000399878 KRTAP15-1Q3LI76 137 aa7.57□□□□□ -1.2
SEL1L3-202ENST00000399878 HERC1Q15751 4861 aa7.53□□□□□ -1.2
SEL1L3-202ENST00000399878 PKHD1L1Q86WI1 4243 aa7.52□□□□□ -1.21
SEL1L3-202ENST00000399878 LCE3AQ5TA76 89 aa7.51□□□□□ -1.21
SEL1L3-202ENST00000399878 TNXBP22105 4242 aa7.46□□□□□ -1.22
SEL1L3-202ENST00000399878 RNF213Q63HN8 5207 aa7.45□□□□□ -1.22
SEL1L3-202ENST00000399878 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
SEL1L3-202ENST00000399878 MUC2Q02817 5179 aa7.41□□□□□ -1.22
SEL1L3-202ENST00000399878 SPRR2GQ9BYE4 73 aa7.4□□□□□ -1.22
SEL1L3-202ENST00000399878 KRTAP12-3P60328 96 aa7.39□□□□□ -1.23
SEL1L3-202ENST00000399878 UBR4Q5T4S7 5183 aa7.31□□□□□ -1.24
SEL1L3-202ENST00000399878 LCE2CQ5TA81 110 aa7.31□□□□□ -1.24
SEL1L3-202ENST00000399878 KRTAP19-1Q8IUB9 90 aa7.3□□□□□ -1.24
SEL1L3-202ENST00000399878 CRCT1Q9UGL9 99 aa7.29□□□□□ -1.24
SEL1L3-202ENST00000399878 FAT4Q6V0I7 4981 aa7.23□□□□□ -1.25
SEL1L3-202ENST00000399878 KRTAP19-2Q3LHN2 52 aa7.17□□□□□ -1.26
SEL1L3-202ENST00000399878 KRTAP9-8Q9BYQ0 159 aa7.17□□□□□ -1.26
SEL1L3-202ENST00000399878 KRTAP8-1Q8IUC2 63 aa7.14□□□□□ -1.27
SEL1L3-202ENST00000399878 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
SEL1L3-202ENST00000399878 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
SEL1L3-202ENST00000399878 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
SEL1L3-202ENST00000399878 MT1BP07438 61 aa6.99□□□□□ -1.29
SEL1L3-202ENST00000399878 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SEL1L3-202ENST00000399878 KRTAP19-8Q3LI54 63 aa6.98□□□□□ -1.29
SEL1L3-202ENST00000399878 FLGP20930 4061 aaPredicted RBP6.97□□□□□ -1.29
SEL1L3-202ENST00000399878 MT1XP80297 61 aa6.92□□□□□ -1.3
SEL1L3-202ENST00000399878 KRTAP9-3Q9BYQ3 159 aa6.91□□□□□ -1.3
SEL1L3-202ENST00000399878 KRTAP19-5Q3LI72 72 aa6.9□□□□□ -1.3
SEL1L3-202ENST00000399878 SPRR2FQ96RM1 72 aa6.87□□□□□ -1.31
SEL1L3-202ENST00000399878 KRTAP10-5P60370 271 aa6.86□□□□□ -1.31
SEL1L3-202ENST00000399878 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
SEL1L3-202ENST00000399878 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
SEL1L3-202ENST00000399878 LCE2BO14633 110 aa6.78□□□□□ -1.32
SEL1L3-202ENST00000399878 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
SEL1L3-202ENST00000399878 LCE2AQ5TA79 106 aaPredicted RBP6.52□□□□□ -1.37
SEL1L3-202ENST00000399878 USH2AO75445 5202 aa6.48□□□□□ -1.37
SEL1L3-202ENST00000399878 SYNE1Q8NF91 8797 aaKnown RBP6.47□□□□□ -1.37
SEL1L3-202ENST00000399878 INE1O15225 51 aa6.46□□□□□ -1.38
SEL1L3-202ENST00000399878 KRTAP9-2Q9BYQ4 174 aa6.45□□□□□ -1.38
SEL1L3-202ENST00000399878 OBSCNQ5VST9 7968 aa6.39□□□□□ -1.39
SEL1L3-202ENST00000399878 SPRR2EP22531 72 aa6.39□□□□□ -1.39
SEL1L3-202ENST00000399878 SPRR2BP35325 72 aa6.39□□□□□ -1.39
SEL1L3-202ENST00000399878 SPRR2AP35326 72 aa6.39□□□□□ -1.39
SEL1L3-202ENST00000399878 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
SEL1L3-202ENST00000399878 MT1GP13640 62 aa6.27□□□□□ -1.41
SEL1L3-202ENST00000399878 DSTQ03001 7570 aaKnown RBP6.21□□□□□ -1.42
SEL1L3-202ENST00000399878 KMT2DO14686 5537 aa6.17□□□□□ -1.42
SEL1L3-202ENST00000399878 SPRR2DP22532 72 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms