RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 LRP1BQ9NZR2 4599 aa4.37□□□□□ -1.71
RETREG1-202ENST00000399793 STARD9Q9P2P6 4700 aa4.36□□□□□ -1.71
RETREG1-202ENST00000399793 DNAH5Q8TE73 4624 aa4.34□□□□□ -1.72
RETREG1-202ENST00000399793 RPS29P62273 56 aaKnown RBP4.33□□□□□ -1.72
RETREG1-202ENST00000399793 KRTAP10-2P60368 255 aa4.32□□□□□ -1.72
RETREG1-202ENST00000399793 VPS13BQ7Z7G8 4022 aa4.31□□□□□ -1.72
RETREG1-202ENST00000399793 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
RETREG1-202ENST00000399793 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
RETREG1-202ENST00000399793 M0QZ58 72 aa4.23□□□□□ -1.73
RETREG1-202ENST00000399793 KRTAP21-3Q3LHN1 58 aa4.2□□□□□ -1.74
RETREG1-202ENST00000399793 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
RETREG1-202ENST00000399793 DNHD1Q96M86 4753 aa4.19□□□□□ -1.74
RETREG1-202ENST00000399793 PKHD1P08F94 4074 aa4.19□□□□□ -1.74
RETREG1-202ENST00000399793 SACSQ9NZJ4 4579 aa4.18□□□□□ -1.74
RETREG1-202ENST00000399793 CAMK2N1Q7Z7J9 78 aa4.17□□□□□ -1.74
RETREG1-202ENST00000399793 MYCBP2O75592 4640 aa4.17□□□□□ -1.74
RETREG1-202ENST00000399793 PKD1P98161 4303 aa4.17□□□□□ -1.74
RETREG1-202ENST00000399793 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
RETREG1-202ENST00000399793 PKHD1L1Q86WI1 4243 aa4.11□□□□□ -1.75
RETREG1-202ENST00000399793 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
RETREG1-202ENST00000399793 LRP1Q07954 4544 aaKnown RBP4.09□□□□□ -1.75
RETREG1-202ENST00000399793 PP632Q6XCG6 107 aa4.09□□□□□ -1.75
RETREG1-202ENST00000399793 HSPG2P98160 4391 aa4.06□□□□□ -1.76
RETREG1-202ENST00000399793 R4GN34 69 aa4.05□□□□□ -1.76
RETREG1-202ENST00000399793 SMR3BP02814 79 aaPredicted RBP4.05□□□□□ -1.76
RETREG1-202ENST00000399793 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
RETREG1-202ENST00000399793 FAT3Q8TDW7 4589 aa4□□□□□ -1.77
RETREG1-202ENST00000399793 HYDINQ4G0P3 5121 aa4□□□□□ -1.77
RETREG1-202ENST00000399793 DYNC1H1Q14204 4646 aaKnown RBP4□□□□□ -1.77
RETREG1-202ENST00000399793 TNXBP22105 4242 aa3.97□□□□□ -1.77
RETREG1-202ENST00000399793 FAT1Q14517 4588 aa3.96□□□□□ -1.78
RETREG1-202ENST00000399793 LORP23490 312 aaPredicted RBP3.94□□□□□ -1.78
RETREG1-202ENST00000399793 KRTAP10-4P60372 401 aaPredicted RBP3.94□□□□□ -1.78
RETREG1-202ENST00000399793 INE1O15225 51 aa3.92□□□□□ -1.78
RETREG1-202ENST00000399793 J3QL48 77 aa3.89□□□□□ -1.79
RETREG1-202ENST00000399793 LPAP08519 4548 aa3.88□□□□□ -1.79
RETREG1-202ENST00000399793 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
RETREG1-202ENST00000399793 TNP1P09430 55 aa3.81□□□□□ -1.8
RETREG1-202ENST00000399793 KRTAP23-1A1A580 65 aa3.81□□□□□ -1.8
RETREG1-202ENST00000399793 LRP2P98164 4655 aa3.76□□□□□ -1.81
RETREG1-202ENST00000399793 KMT2CQ8NEZ4 4911 aaKnown RBP3.73□□□□□ -1.81
RETREG1-202ENST00000399793 KRTAP4-8Q9BYQ9 185 aa3.73□□□□□ -1.81
RETREG1-202ENST00000399793 Q5VSD8 79 aa3.71□□□□□ -1.82
RETREG1-202ENST00000399793 A0A1B0GVY2 172 aa3.67□□□□□ -1.82
RETREG1-202ENST00000399793 RYR3Q15413 4870 aa3.64□□□□□ -1.83
RETREG1-202ENST00000399793 LCE2BO14633 110 aa3.63□□□□□ -1.83
RETREG1-202ENST00000399793 LCE2AQ5TA79 106 aaPredicted RBP3.63□□□□□ -1.83
RETREG1-202ENST00000399793 KRTAP9-8Q9BYQ0 159 aa3.61□□□□□ -1.83
RETREG1-202ENST00000399793 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
RETREG1-202ENST00000399793 KRTAP4-8A0A0G2JLE6 195 aa3.59□□□□□ -1.84
RETREG1-202ENST00000399793 KRTAP5-3Q6L8H2 238 aa3.59□□□□□ -1.84
RETREG1-202ENST00000399793 LCE3AQ5TA76 89 aa3.57□□□□□ -1.84
RETREG1-202ENST00000399793 EPPK1P58107 5090 aaKnown RBP3.57□□□□□ -1.84
RETREG1-202ENST00000399793 MT1HL1P0DM35 61 aa3.56□□□□□ -1.84
RETREG1-202ENST00000399793 MUC17Q685J3 4493 aa3.56□□□□□ -1.84
RETREG1-202ENST00000399793 BIRC6Q9NR09 4857 aa3.54□□□□□ -1.84
RETREG1-202ENST00000399793 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
RETREG1-202ENST00000399793 KRTAP4-1Q9BYQ7 146 aa3.5□□□□□ -1.85
RETREG1-202ENST00000399793 RYR1P21817 5038 aa3.5□□□□□ -1.85
RETREG1-202ENST00000399793 KRTAP19-2Q3LHN2 52 aa3.48□□□□□ -1.85
RETREG1-202ENST00000399793 RYR2Q92736 4967 aa3.47□□□□□ -1.85
RETREG1-202ENST00000399793 KRTAP10-10P60014 251 aa3.45□□□□□ -1.86
RETREG1-202ENST00000399793 KRTAP8-1Q8IUC2 63 aa3.45□□□□□ -1.86
RETREG1-202ENST00000399793 PCLOQ9Y6V0 5065 aa3.44□□□□□ -1.86
RETREG1-202ENST00000399793 KRTAP10-12P60413 245 aa3.44□□□□□ -1.86
RETREG1-202ENST00000399793 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
RETREG1-202ENST00000399793 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
RETREG1-202ENST00000399793 HERC1Q15751 4861 aa3.4□□□□□ -1.87
RETREG1-202ENST00000399793 KIAA1109Q2LD37 5005 aa3.4□□□□□ -1.87
RETREG1-202ENST00000399793 KRTAP9-6A0A140TA67 174 aa3.39□□□□□ -1.87
RETREG1-202ENST00000399793 KRTAP12-3P60328 96 aa3.37□□□□□ -1.87
RETREG1-202ENST00000399793 KRTAP4-9Q9BYQ8 210 aa3.37□□□□□ -1.87
RETREG1-202ENST00000399793 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
RETREG1-202ENST00000399793 HERC2O95714 4834 aa3.32□□□□□ -1.88
RETREG1-202ENST00000399793 SPRR2GQ9BYE4 73 aa3.32□□□□□ -1.88
RETREG1-202ENST00000399793 KRTAP4-5Q9BYR2 181 aa3.32□□□□□ -1.88
RETREG1-202ENST00000399793 KRTAP19-1Q8IUB9 90 aa3.3□□□□□ -1.88
RETREG1-202ENST00000399793 LCE3BQ5TA77 95 aa3.3□□□□□ -1.88
RETREG1-202ENST00000399793 KRTAP4-2Q9BYR5 136 aa3.29□□□□□ -1.88
RETREG1-202ENST00000399793 KRTAP10-5P60370 271 aa3.28□□□□□ -1.88
RETREG1-202ENST00000399793 LCE1DQ5T752 114 aa3.28□□□□□ -1.88
RETREG1-202ENST00000399793 MUC2Q02817 5179 aa3.26□□□□□ -1.89
RETREG1-202ENST00000399793 LCE2CQ5TA81 110 aa3.26□□□□□ -1.89
RETREG1-202ENST00000399793 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
RETREG1-202ENST00000399793 KRTAP9-4Q9BYQ2 154 aa3.24□□□□□ -1.89
RETREG1-202ENST00000399793 UBR4Q5T4S7 5183 aa3.23□□□□□ -1.89
RETREG1-202ENST00000399793 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP4-12Q9BQ66 201 aa3.19□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP2-3P0C7H8 128 aa3.18□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP2-4Q9BYR9 128 aa3.18□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP2-1Q9BYU5 128 aa3.18□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
RETREG1-202ENST00000399793 MT1XP80297 61 aa3.16□□□□□ -1.9
RETREG1-202ENST00000399793 KRTAP10-7P60409 375 aaPredicted RBP3.13□□□□□ -1.91
RETREG1-202ENST00000399793 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
RETREG1-202ENST00000399793 HMCN2Q8NDA2 5059 aa3.09□□□□□ -1.91
RETREG1-202ENST00000399793 KRTAP19-8Q3LI54 63 aa3.08□□□□□ -1.92
RETREG1-202ENST00000399793 KRTAP19-5Q3LI72 72 aa3.08□□□□□ -1.92
RETREG1-202ENST00000399793 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
RETREG1-202ENST00000399793 MT1FP04733 61 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms