RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 FLG2Q5D862 2391 aaPredicted RBP13.47□□□□□ -0.25
COL13A1-203ENST00000398969 H1FX-AS1Q4G0G2 97 aa13.45□□□□□ -0.26
COL13A1-203ENST00000398969 CSAG1Q6PB30 78 aa13.37□□□□□ -0.27
COL13A1-203ENST00000398969 FAT3Q8TDW7 4589 aa13.37□□□□□ -0.27
COL13A1-203ENST00000398969 LINC01554Q52M75 96 aa13.35□□□□□ -0.27
COL13A1-203ENST00000398969 DMBT1Q9UGM3 2413 aaPredicted RBP13.26□□□□□ -0.29
COL13A1-203ENST00000398969 MYCBP2O75592 4640 aa13.25□□□□□ -0.29
COL13A1-203ENST00000398969 MT1HL1P0DM35 61 aa13.23□□□□□ -0.29
COL13A1-203ENST00000398969 RPL37P61927 97 aaKnown RBP13.21□□□□□ -0.29
COL13A1-203ENST00000398969 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
COL13A1-203ENST00000398969 XP32Q5T750 250 aa13.13□□□□□ -0.31
COL13A1-203ENST00000398969 KRTAP4-5Q9BYR2 181 aa13.08□□□□□ -0.32
COL13A1-203ENST00000398969 KRTAP10-6P60371 365 aaPredicted RBP13.08□□□□□ -0.32
COL13A1-203ENST00000398969 K7ERS5 55 aa13.06□□□□□ -0.32
COL13A1-203ENST00000398969 KRTAP25-1Q3LHN0 102 aa13.02□□□□□ -0.33
COL13A1-203ENST00000398969 S4R3F8 94 aa13□□□□□ -0.33
COL13A1-203ENST00000398969 KRTAP3-2Q9BYR7 98 aa12.97□□□□□ -0.33
COL13A1-203ENST00000398969 KRTAP13-4Q3LI77 160 aa12.95□□□□□ -0.34
COL13A1-203ENST00000398969 A0A0D9SG42 100 aa12.82□□□□□ -0.36
COL13A1-203ENST00000398969 ROMO1P60602 79 aa12.8□□□□□ -0.36
COL13A1-203ENST00000398969 P0C880 135 aa12.79□□□□□ -0.36
COL13A1-203ENST00000398969 ABCA13Q86UQ4 5058 aa12.79□□□□□ -0.36
COL13A1-203ENST00000398969 CRIPTQ9P021 101 aa12.79□□□□□ -0.36
COL13A1-203ENST00000398969 TPRXLQ17RH7 258 aa12.75□□□□□ -0.37
COL13A1-203ENST00000398969 BIRC6Q9NR09 4857 aa12.74□□□□□ -0.37
COL13A1-203ENST00000398969 HERC2O95714 4834 aa12.69□□□□□ -0.38
COL13A1-203ENST00000398969 J3QL48 77 aa12.63□□□□□ -0.39
COL13A1-203ENST00000398969 LRP2P98164 4655 aa12.62□□□□□ -0.39
COL13A1-203ENST00000398969 LPAP08519 4548 aa12.6□□□□□ -0.39
COL13A1-203ENST00000398969 H3BS24 57 aa12.53□□□□□ -0.4
COL13A1-203ENST00000398969 KRTAP12-2P59991 146 aa12.53□□□□□ -0.4
COL13A1-203ENST00000398969 KRTAP12-1P59990 96 aa12.44□□□□□ -0.42
COL13A1-203ENST00000398969 SPINT4Q6UDR6 99 aa12.39□□□□□ -0.43
COL13A1-203ENST00000398969 M0QZ58 72 aa12.38□□□□□ -0.43
COL13A1-203ENST00000398969 C10orf95Q9H7T3 257 aa12.35□□□□□ -0.43
COL13A1-203ENST00000398969 SEC61BP60468 96 aaKnown RBP12.28□□□□□ -0.44
COL13A1-203ENST00000398969 PCLOQ9Y6V0 5065 aa12.2□□□□□ -0.46
COL13A1-203ENST00000398969 MUC17Q685J3 4493 aa12.1□□□□□ -0.47
COL13A1-203ENST00000398969 KRTAP4-1Q9BYQ7 146 aa12.09□□□□□ -0.47
COL13A1-203ENST00000398969 HERC1Q15751 4861 aa12.07□□□□□ -0.48
COL13A1-203ENST00000398969 R4GN34 69 aa12.06□□□□□ -0.48
COL13A1-203ENST00000398969 HMCN2Q8NDA2 5059 aa11.94□□□□□ -0.5
COL13A1-203ENST00000398969 LORP23490 312 aaPredicted RBP11.92□□□□□ -0.5
COL13A1-203ENST00000398969 KRTAP15-1Q3LI76 137 aa11.89□□□□□ -0.51
COL13A1-203ENST00000398969 KRTAP19-2Q3LHN2 52 aa11.81□□□□□ -0.52
COL13A1-203ENST00000398969 MUC2Q02817 5179 aa11.8□□□□□ -0.52
COL13A1-203ENST00000398969 NDUFAF8A1L188 74 aa11.58□□□□□ -0.55
COL13A1-203ENST00000398969 FLGP20930 4061 aaPredicted RBP11.5□□□□□ -0.57
COL13A1-203ENST00000398969 CAMK2N1Q7Z7J9 78 aa11.45□□□□□ -0.58
COL13A1-203ENST00000398969 UBR4Q5T4S7 5183 aa11.41□□□□□ -0.58
COL13A1-203ENST00000398969 LCE2CQ5TA81 110 aa11.38□□□□□ -0.59
COL13A1-203ENST00000398969 PLAC4Q8WY50 150 aa11.34□□□□□ -0.59
COL13A1-203ENST00000398969 RNF213Q63HN8 5207 aa11.33□□□□□ -0.6
COL13A1-203ENST00000398969 PP632Q6XCG6 107 aa11.3□□□□□ -0.6
COL13A1-203ENST00000398969 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
COL13A1-203ENST00000398969 MT1HP80294 61 aa11.11□□□□□ -0.63
COL13A1-203ENST00000398969 M0R2T5 61 aa11.05□□□□□ -0.64
COL13A1-203ENST00000398969 TNP1P09430 55 aa11.04□□□□□ -0.64
COL13A1-203ENST00000398969 KRTAP23-1A1A580 65 aa10.93□□□□□ -0.66
COL13A1-203ENST00000398969 SPRR2GQ9BYE4 73 aa10.91□□□□□ -0.66
COL13A1-203ENST00000398969 KRTAP19-1Q8IUB9 90 aa10.84□□□□□ -0.67
COL13A1-203ENST00000398969 LUZP6Q538Z0 58 aa10.81□□□□□ -0.68
COL13A1-203ENST00000398969 KRTAP9-8Q9BYQ0 159 aa10.77□□□□□ -0.69
COL13A1-203ENST00000398969 MT2AP02795 61 aa10.76□□□□□ -0.69
COL13A1-203ENST00000398969 MT1FP04733 61 aa10.73□□□□□ -0.69
COL13A1-203ENST00000398969 KRTAP10-10P60014 251 aa10.69□□□□□ -0.7
COL13A1-203ENST00000398969 SPRR5A0A1B0GTR4 108 aa10.6□□□□□ -0.71
COL13A1-203ENST00000398969 LCE3AQ5TA76 89 aa10.46□□□□□ -0.73
COL13A1-203ENST00000398969 KRTAP19-8Q3LI54 63 aa10.41□□□□□ -0.74
COL13A1-203ENST00000398969 LCE2AQ5TA79 106 aaPredicted RBP10.39□□□□□ -0.75
COL13A1-203ENST00000398969 KRTAP9-3Q9BYQ3 159 aa10.36□□□□□ -0.75
COL13A1-203ENST00000398969 A0A0A0MQY5 61 aa10.28□□□□□ -0.76
COL13A1-203ENST00000398969 MT1BP07438 61 aa10.27□□□□□ -0.76
COL13A1-203ENST00000398969 KRTAP10-5P60370 271 aa10.24□□□□□ -0.77
COL13A1-203ENST00000398969 MT1XP80297 61 aa10.22□□□□□ -0.77
COL13A1-203ENST00000398969 KRTAP8-1Q8IUC2 63 aa10.22□□□□□ -0.77
COL13A1-203ENST00000398969 KRTAP10-12P60413 245 aa10.03□□□□□ -0.8
COL13A1-203ENST00000398969 LCE2BO14633 110 aa10.03□□□□□ -0.8
COL13A1-203ENST00000398969 KRTAP12-3P60328 96 aa9.96□□□□□ -0.82
COL13A1-203ENST00000398969 KRTAP10-7P60409 375 aaPredicted RBP9.93□□□□□ -0.82
COL13A1-203ENST00000398969 PRO2289Q9P1D8 64 aa9.8□□□□□ -0.84
COL13A1-203ENST00000398969 USH2AO75445 5202 aa9.77□□□□□ -0.85
COL13A1-203ENST00000398969 KRTAP19-5Q3LI72 72 aa9.53□□□□□ -0.88
COL13A1-203ENST00000398969 LCE3CQ5T5A8 94 aa9.39□□□□□ -0.91
COL13A1-203ENST00000398969 INE1O15225 51 aa9.34□□□□□ -0.91
COL13A1-203ENST00000398969 SSPOA2VEC9 5147 aa9.34□□□□□ -0.91
COL13A1-203ENST00000398969 KRTAP4-8A0A0G2JLE6 195 aa9.29□□□□□ -0.92
COL13A1-203ENST00000398969 KRTAP4-8Q9BYQ9 185 aa9.29□□□□□ -0.92
COL13A1-203ENST00000398969 KMT2DO14686 5537 aa9.26□□□□□ -0.93
COL13A1-203ENST00000398969 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
COL13A1-203ENST00000398969 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
COL13A1-203ENST00000398969 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.94
COL13A1-203ENST00000398969 KRTAP19-7Q3SYF9 63 aa9.11□□□□□ -0.95
COL13A1-203ENST00000398969 KRTAP9-6A8MVA2 160 aa9.07□□□□□ -0.96
COL13A1-203ENST00000398969 KRTAP4-7Q9BYR0 210 aa8.93□□□□□ -0.98
COL13A1-203ENST00000398969 KRTAP19-4Q3LI73 84 aa8.85□□□□□ -0.99
COL13A1-203ENST00000398969 FCGBPQ9Y6R7 5405 aaPredicted RBP8.85□□□□□ -0.99
COL13A1-203ENST00000398969 MT1LQ93083 61 aa8.84□□□□□ -0.99
COL13A1-203ENST00000398969 MT1EP04732 61 aa8.83□□□□□ -1
COL13A1-203ENST00000398969 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms