RNA–Protein interactions for RNA: ENST00000397961.6

PFKL-202, Transcript of phosphofructokinase, liver type, humanhuman

TSL 1 (best)

Gene PFKL, Length 3,390 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKL-202ENST00000397961 H0YAA0 97 aa7.8□□□□□ -1.16
PFKL-202ENST00000397961 PKHD1L1Q86WI1 4243 aa7.79□□□□□ -1.16
PFKL-202ENST00000397961 LPAP08519 4548 aa7.78□□□□□ -1.16
PFKL-202ENST00000397961 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
PFKL-202ENST00000397961 LRP2P98164 4655 aa7.77□□□□□ -1.17
PFKL-202ENST00000397961 KRTAP17-1Q9BYP8 105 aa7.76□□□□□ -1.17
PFKL-202ENST00000397961 COX6B2Q6YFQ2 88 aa7.74□□□□□ -1.17
PFKL-202ENST00000397961 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
PFKL-202ENST00000397961 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
PFKL-202ENST00000397961 EPPK1P58107 5090 aaKnown RBP7.7□□□□□ -1.18
PFKL-202ENST00000397961 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
PFKL-202ENST00000397961 XP32Q5T750 250 aa7.69□□□□□ -1.18
PFKL-202ENST00000397961 K7ERS5 55 aa7.65□□□□□ -1.18
PFKL-202ENST00000397961 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
PFKL-202ENST00000397961 ABCA13Q86UQ4 5058 aa7.65□□□□□ -1.19
PFKL-202ENST00000397961 S4R3F8 94 aa7.62□□□□□ -1.19
PFKL-202ENST00000397961 P0C880 135 aa7.6□□□□□ -1.19
PFKL-202ENST00000397961 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
PFKL-202ENST00000397961 RPL37P61927 97 aaKnown RBP7.59□□□□□ -1.19
PFKL-202ENST00000397961 KRTAP4-5Q9BYR2 181 aa7.59□□□□□ -1.19
PFKL-202ENST00000397961 MUC2Q02817 5179 aa7.59□□□□□ -1.19
PFKL-202ENST00000397961 TNXBP22105 4242 aa7.56□□□□□ -1.2
PFKL-202ENST00000397961 KRTAP13-4Q3LI77 160 aa7.55□□□□□ -1.2
PFKL-202ENST00000397961 C10orf95Q9H7T3 257 aa7.51□□□□□ -1.21
PFKL-202ENST00000397961 J3QL48 77 aa7.49□□□□□ -1.21
PFKL-202ENST00000397961 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
PFKL-202ENST00000397961 MT1HL1P0DM35 61 aa7.46□□□□□ -1.21
PFKL-202ENST00000397961 KRTAP10-6P60371 365 aaPredicted RBP7.43□□□□□ -1.22
PFKL-202ENST00000397961 KRTAP25-1Q3LHN0 102 aa7.36□□□□□ -1.23
PFKL-202ENST00000397961 KRTAP3-2Q9BYR7 98 aa7.33□□□□□ -1.24
PFKL-202ENST00000397961 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
PFKL-202ENST00000397961 M0QZ58 72 aa7.32□□□□□ -1.24
PFKL-202ENST00000397961 ROMO1P60602 79 aa7.32□□□□□ -1.24
PFKL-202ENST00000397961 HERC2O95714 4834 aa7.31□□□□□ -1.24
PFKL-202ENST00000397961 R4GN34 69 aa7.28□□□□□ -1.24
PFKL-202ENST00000397961 HERC1Q15751 4861 aa7.21□□□□□ -1.26
PFKL-202ENST00000397961 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
PFKL-202ENST00000397961 RNF213Q63HN8 5207 aa7.19□□□□□ -1.26
PFKL-202ENST00000397961 FAT4Q6V0I7 4981 aa7.17□□□□□ -1.26
PFKL-202ENST00000397961 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.27
PFKL-202ENST00000397961 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
PFKL-202ENST00000397961 KRTAP4-1Q9BYQ7 146 aa7.12□□□□□ -1.27
PFKL-202ENST00000397961 SEC61BP60468 96 aaKnown RBP7.11□□□□□ -1.27
PFKL-202ENST00000397961 CAMK2N1Q7Z7J9 78 aa7.04□□□□□ -1.28
PFKL-202ENST00000397961 A0A0A0MQY5 61 aa6.99□□□□□ -1.29
PFKL-202ENST00000397961 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
PFKL-202ENST00000397961 M0R2T5 61 aa6.96□□□□□ -1.29
PFKL-202ENST00000397961 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
PFKL-202ENST00000397961 NDUFAF8A1L188 74 aa6.92□□□□□ -1.3
PFKL-202ENST00000397961 MUC17Q685J3 4493 aa6.83□□□□□ -1.32
PFKL-202ENST00000397961 HMCN2Q8NDA2 5059 aa6.77□□□□□ -1.33
PFKL-202ENST00000397961 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
PFKL-202ENST00000397961 PLAC4Q8WY50 150 aa6.58□□□□□ -1.36
PFKL-202ENST00000397961 KRTAP15-1Q3LI76 137 aa6.57□□□□□ -1.36
PFKL-202ENST00000397961 FLGP20930 4061 aaPredicted RBP6.56□□□□□ -1.36
PFKL-202ENST00000397961 KRTAP10-10P60014 251 aa6.55□□□□□ -1.36
PFKL-202ENST00000397961 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
PFKL-202ENST00000397961 USH2AO75445 5202 aa6.47□□□□□ -1.37
PFKL-202ENST00000397961 TNP1P09430 55 aa6.46□□□□□ -1.37
PFKL-202ENST00000397961 FSIP2Q5CZC0 6907 aa6.46□□□□□ -1.38
PFKL-202ENST00000397961 LUZP6Q538Z0 58 aa6.41□□□□□ -1.38
PFKL-202ENST00000397961 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
PFKL-202ENST00000397961 MT1HP80294 61 aa6.3□□□□□ -1.4
PFKL-202ENST00000397961 KMT2DO14686 5537 aa6.28□□□□□ -1.4
PFKL-202ENST00000397961 MT1FP04733 61 aa6.27□□□□□ -1.41
PFKL-202ENST00000397961 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
PFKL-202ENST00000397961 PP632Q6XCG6 107 aa6.21□□□□□ -1.42
PFKL-202ENST00000397961 MT2AP02795 61 aa6.2□□□□□ -1.42
PFKL-202ENST00000397961 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
PFKL-202ENST00000397961 SPRR2GQ9BYE4 73 aa6.07□□□□□ -1.44
PFKL-202ENST00000397961 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
PFKL-202ENST00000397961 KRTAP10-7P60409 375 aaPredicted RBP5.92□□□□□ -1.46
PFKL-202ENST00000397961 MT1BP07438 61 aa5.9□□□□□ -1.46
PFKL-202ENST00000397961 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
PFKL-202ENST00000397961 MT1XP80297 61 aa5.87□□□□□ -1.47
PFKL-202ENST00000397961 KRTAP10-5P60370 271 aa5.87□□□□□ -1.47
PFKL-202ENST00000397961 KRTAP12-3P60328 96 aa5.83□□□□□ -1.48
PFKL-202ENST00000397961 DSTQ03001 7570 aaKnown RBP5.79□□□□□ -1.48
PFKL-202ENST00000397961 KRTAP4-8A0A0G2JLE6 195 aa5.77□□□□□ -1.49
PFKL-202ENST00000397961 KRTAP4-8Q9BYQ9 185 aa5.77□□□□□ -1.49
PFKL-202ENST00000397961 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
PFKL-202ENST00000397961 LCE2BO14633 110 aa5.72□□□□□ -1.49
PFKL-202ENST00000397961 PRO2289Q9P1D8 64 aa5.72□□□□□ -1.49
PFKL-202ENST00000397961 KRTAP19-8Q3LI54 63 aa5.72□□□□□ -1.49
PFKL-202ENST00000397961 OBSCNQ5VST9 7968 aa5.66□□□□□ -1.5
PFKL-202ENST00000397961 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.5
PFKL-202ENST00000397961 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
PFKL-202ENST00000397961 KRTAP23-1A1A580 65 aa5.63□□□□□ -1.51
PFKL-202ENST00000397961 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
PFKL-202ENST00000397961 FCGBPQ9Y6R7 5405 aaPredicted RBP5.57□□□□□ -1.52
PFKL-202ENST00000397961 SPRR5A0A1B0GTR4 108 aa5.56□□□□□ -1.52
PFKL-202ENST00000397961 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
PFKL-202ENST00000397961 SSPOA2VEC9 5147 aa5.51□□□□□ -1.53
PFKL-202ENST00000397961 SYNE1Q8NF91 8797 aaKnown RBP5.51□□□□□ -1.53
PFKL-202ENST00000397961 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
PFKL-202ENST00000397961 LCE2AQ5TA79 106 aaPredicted RBP5.36□□□□□ -1.55
PFKL-202ENST00000397961 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
PFKL-202ENST00000397961 KRTAP9-6A8MVA2 160 aa5.27□□□□□ -1.57
PFKL-202ENST00000397961 SYNE2Q8WXH0 6885 aaKnown RBP5.25□□□□□ -1.57
PFKL-202ENST00000397961 KRTAP4-3Q9BYR4 195 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms