RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 DNAH8Q96JB1 4490 aa3.13□□□□□ -1.91
PTPRD-206ENST00000397617 KMT2AQ03164 3969 aa3.12□□□□□ -1.91
PTPRD-206ENST00000397617 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
PTPRD-206ENST00000397617 M0QZ58 72 aa3.1□□□□□ -1.91
PTPRD-206ENST00000397617 APOBP04114 4563 aaKnown RBP3.1□□□□□ -1.91
PTPRD-206ENST00000397617 PP632Q6XCG6 107 aa3.1□□□□□ -1.91
PTPRD-206ENST00000397617 KMT2CQ8NEZ4 4911 aaKnown RBP3.08□□□□□ -1.92
PTPRD-206ENST00000397617 RYR3Q15413 4870 aa3.08□□□□□ -1.92
PTPRD-206ENST00000397617 H1FX-AS1Q4G0G2 97 aa3.07□□□□□ -1.92
PTPRD-206ENST00000397617 PKD1P98161 4303 aa3.06□□□□□ -1.92
PTPRD-206ENST00000397617 FAT2Q9NYQ8 4349 aa3.05□□□□□ -1.92
PTPRD-206ENST00000397617 VPS13BQ7Z7G8 4022 aa3.05□□□□□ -1.92
PTPRD-206ENST00000397617 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
PTPRD-206ENST00000397617 PKHD1P08F94 4074 aa3.03□□□□□ -1.92
PTPRD-206ENST00000397617 FAT1Q14517 4588 aa3.02□□□□□ -1.93
PTPRD-206ENST00000397617 FRAS1Q86XX4 4008 aa3.01□□□□□ -1.93
PTPRD-206ENST00000397617 KRTAP3-1Q9BYR8 98 aa3□□□□□ -1.93
PTPRD-206ENST00000397617 HYDINQ4G0P3 5121 aa2.99□□□□□ -1.93
PTPRD-206ENST00000397617 TNP1P09430 55 aa2.98□□□□□ -1.93
PTPRD-206ENST00000397617 HERC2O95714 4834 aa2.97□□□□□ -1.93
PTPRD-206ENST00000397617 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
PTPRD-206ENST00000397617 ADM2Q7Z4H4 148 aa2.96□□□□□ -1.94
PTPRD-206ENST00000397617 PRAC1Q96KF2 57 aa2.95□□□□□ -1.94
PTPRD-206ENST00000397617 PKHD1L1Q86WI1 4243 aa2.93□□□□□ -1.94
PTPRD-206ENST00000397617 MYCBP2O75592 4640 aa2.92□□□□□ -1.94
PTPRD-206ENST00000397617 KRTAP3-3Q9BYR6 98 aa2.91□□□□□ -1.94
PTPRD-206ENST00000397617 KRTAP10-6P60371 365 aaPredicted RBP2.91□□□□□ -1.94
PTPRD-206ENST00000397617 NDUFAF8A1L188 74 aa2.9□□□□□ -1.94
PTPRD-206ENST00000397617 PRO2289Q9P1D8 64 aa2.9□□□□□ -1.95
PTPRD-206ENST00000397617 LRP1Q07954 4544 aaKnown RBP2.89□□□□□ -1.95
PTPRD-206ENST00000397617 KRTAP3-2Q9BYR7 98 aa2.88□□□□□ -1.95
PTPRD-206ENST00000397617 ABCA13Q86UQ4 5058 aa2.88□□□□□ -1.95
PTPRD-206ENST00000397617 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
PTPRD-206ENST00000397617 INE1O15225 51 aa2.84□□□□□ -1.95
PTPRD-206ENST00000397617 KRTAP23-1A1A580 65 aa2.83□□□□□ -1.96
PTPRD-206ENST00000397617 HSPG2P98160 4391 aa2.83□□□□□ -1.96
PTPRD-206ENST00000397617 EPPK1P58107 5090 aaKnown RBP2.81□□□□□ -1.96
PTPRD-206ENST00000397617 KRTAP17-1Q9BYP8 105 aa2.81□□□□□ -1.96
PTPRD-206ENST00000397617 P0C880 135 aa2.8□□□□□ -1.96
PTPRD-206ENST00000397617 KRTAP19-2Q3LHN2 52 aa2.8□□□□□ -1.96
PTPRD-206ENST00000397617 TNXBP22105 4242 aa2.79□□□□□ -1.96
PTPRD-206ENST00000397617 LRP2P98164 4655 aa2.79□□□□□ -1.96
PTPRD-206ENST00000397617 FLGP20930 4061 aaPredicted RBP2.78□□□□□ -1.96
PTPRD-206ENST00000397617 PCLOQ9Y6V0 5065 aa2.78□□□□□ -1.96
PTPRD-206ENST00000397617 HERC1Q15751 4861 aa2.78□□□□□ -1.96
PTPRD-206ENST00000397617 KRTAP4-5Q9BYR2 181 aa2.77□□□□□ -1.97
PTPRD-206ENST00000397617 MUC17Q685J3 4493 aa2.75□□□□□ -1.97
PTPRD-206ENST00000397617 C10orf95Q9H7T3 257 aa2.75□□□□□ -1.97
PTPRD-206ENST00000397617 A8MU10 97 aa2.75□□□□□ -1.97
PTPRD-206ENST00000397617 HMCN2Q8NDA2 5059 aa2.74□□□□□ -1.97
PTPRD-206ENST00000397617 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
PTPRD-206ENST00000397617 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
PTPRD-206ENST00000397617 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
PTPRD-206ENST00000397617 UBR4Q5T4S7 5183 aa2.7□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP13-4Q3LI77 160 aa2.69□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
PTPRD-206ENST00000397617 LCE2CQ5TA81 110 aa2.66□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.98
PTPRD-206ENST00000397617 KRTAP12-2P59991 146 aa2.6□□□□□ -1.99
PTPRD-206ENST00000397617 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -2
PTPRD-206ENST00000397617 MT1HP80294 61 aa2.56□□□□□ -2
PTPRD-206ENST00000397617 KRTAP15-1Q3LI76 137 aa2.55□□□□□ -2
PTPRD-206ENST00000397617 MT2AP02795 61 aa2.55□□□□□ -2
PTPRD-206ENST00000397617 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
PTPRD-206ENST00000397617 KRTAP8-1Q8IUC2 63 aa2.53□□□□□ -2
PTPRD-206ENST00000397617 LORP23490 312 aaPredicted RBP2.53□□□□□ -2
PTPRD-206ENST00000397617 LCE2AQ5TA79 106 aaPredicted RBP2.51□□□□□ -2.01
PTPRD-206ENST00000397617 FAT4Q6V0I7 4981 aa2.5□□□□□ -2.01
PTPRD-206ENST00000397617 MT1FP04733 61 aa2.46□□□□□ -2.01
PTPRD-206ENST00000397617 KRTAP9-3Q9BYQ3 159 aa2.46□□□□□ -2.02
PTPRD-206ENST00000397617 MUC2Q02817 5179 aa2.45□□□□□ -2.02
PTPRD-206ENST00000397617 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
PTPRD-206ENST00000397617 MT1BP07438 61 aa2.42□□□□□ -2.02
PTPRD-206ENST00000397617 KRTAP10-5P60370 271 aa2.36□□□□□ -2.03
PTPRD-206ENST00000397617 MT1XP80297 61 aa2.36□□□□□ -2.03
PTPRD-206ENST00000397617 KRTAP10-12P60413 245 aa2.35□□□□□ -2.03
PTPRD-206ENST00000397617 USH2AO75445 5202 aa2.34□□□□□ -2.04
PTPRD-206ENST00000397617 LPAP08519 4548 aa2.33□□□□□ -2.04
PTPRD-206ENST00000397617 KRTAP19-6Q3LI70 58 aa2.32□□□□□ -2.04
PTPRD-206ENST00000397617 LCE2DQ5TA82 110 aaPredicted RBP2.32□□□□□ -2.04
PTPRD-206ENST00000397617 KRTAP12-3P60328 96 aa2.3□□□□□ -2.04
PTPRD-206ENST00000397617 LCE2BO14633 110 aa2.28□□□□□ -2.04
PTPRD-206ENST00000397617 MT3P25713 68 aa2.24□□□□□ -2.05
PTPRD-206ENST00000397617 LCE3AQ5TA76 89 aa2.22□□□□□ -2.05
PTPRD-206ENST00000397617 KRTAP10-7P60409 375 aaPredicted RBP2.2□□□□□ -2.06
PTPRD-206ENST00000397617 SSPOA2VEC9 5147 aa2.18□□□□□ -2.06
PTPRD-206ENST00000397617 KRTAP19-7Q3SYF9 63 aa2.16□□□□□ -2.06
PTPRD-206ENST00000397617 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
PTPRD-206ENST00000397617 MT1GP13640 62 aa2.14□□□□□ -2.07
PTPRD-206ENST00000397617 LCE3CQ5T5A8 94 aa2.13□□□□□ -2.07
PTPRD-206ENST00000397617 MT1LQ93083 61 aa2.12□□□□□ -2.07
PTPRD-206ENST00000397617 MT1EP04732 61 aa2.11□□□□□ -2.07
PTPRD-206ENST00000397617 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
PTPRD-206ENST00000397617 LCE1AQ5T7P2 110 aa2.11□□□□□ -2.07
PTPRD-206ENST00000397617 MDN1Q9NU22 5596 aa2.09□□□□□ -2.07
PTPRD-206ENST00000397617 KRTAP19-5Q3LI72 72 aa2.08□□□□□ -2.08
PTPRD-206ENST00000397617 KMT2DO14686 5537 aa2.08□□□□□ -2.08
PTPRD-206ENST00000397617 KRTAP5-9P26371 169 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms