RNA–Protein interactions for RNA: ENST00000397087.7

RAPGEF4-203, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-203ENST00000397087 KRTAP10-8P60410 259 aa3.32□□□□□ -1.88
RAPGEF4-203ENST00000397087 CDC42SE1Q9NRR8 79 aa3.31□□□□□ -1.88
RAPGEF4-203ENST00000397087 LRP1BQ9NZR2 4599 aa3.29□□□□□ -1.88
RAPGEF4-203ENST00000397087 FAT1Q14517 4588 aa3.28□□□□□ -1.89
RAPGEF4-203ENST00000397087 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
RAPGEF4-203ENST00000397087 RYR2Q92736 4967 aa3.27□□□□□ -1.89
RAPGEF4-203ENST00000397087 HYDINQ4G0P3 5121 aa3.26□□□□□ -1.89
RAPGEF4-203ENST00000397087 ADM2Q7Z4H4 148 aa3.26□□□□□ -1.89
RAPGEF4-203ENST00000397087 MIR22HGQ0VDD5 57 aa3.26□□□□□ -1.89
RAPGEF4-203ENST00000397087 KTN1-AS1Q86SY8 53 aa3.26□□□□□ -1.89
RAPGEF4-203ENST00000397087 LCE3BQ5TA77 95 aa3.26□□□□□ -1.89
RAPGEF4-203ENST00000397087 CRIPTQ9P021 101 aa3.25□□□□□ -1.89
RAPGEF4-203ENST00000397087 SPATA8Q6RVD6 105 aa3.25□□□□□ -1.89
RAPGEF4-203ENST00000397087 RBM12B-AS1Q9P1G2 102 aa3.25□□□□□ -1.89
RAPGEF4-203ENST00000397087 UQCR11O14957 56 aa3.24□□□□□ -1.89
RAPGEF4-203ENST00000397087 A0A0D9SG42 100 aa3.22□□□□□ -1.89
RAPGEF4-203ENST00000397087 RPL37P61927 97 aaKnown RBP3.22□□□□□ -1.89
RAPGEF4-203ENST00000397087 A0A0A0MQY5 61 aa3.22□□□□□ -1.89
RAPGEF4-203ENST00000397087 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.89
RAPGEF4-203ENST00000397087 A6NN06 94 aa3.21□□□□□ -1.9
RAPGEF4-203ENST00000397087 COX6B2Q6YFQ2 88 aa3.2□□□□□ -1.9
RAPGEF4-203ENST00000397087 KRTAP19-4Q3LI73 84 aa3.19□□□□□ -1.9
RAPGEF4-203ENST00000397087 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
RAPGEF4-203ENST00000397087 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
RAPGEF4-203ENST00000397087 Q5VSD8 79 aa3.17□□□□□ -1.9
RAPGEF4-203ENST00000397087 CSAG1Q6PB30 78 aa3.17□□□□□ -1.9
RAPGEF4-203ENST00000397087 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
RAPGEF4-203ENST00000397087 K7ERS5 55 aa3.16□□□□□ -1.9
RAPGEF4-203ENST00000397087 MUC17Q685J3 4493 aa3.14□□□□□ -1.91
RAPGEF4-203ENST00000397087 H0YAA0 97 aa3.14□□□□□ -1.91
RAPGEF4-203ENST00000397087 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
RAPGEF4-203ENST00000397087 A0A1B0GU33 70 aa3.13□□□□□ -1.91
RAPGEF4-203ENST00000397087 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
RAPGEF4-203ENST00000397087 LINC01554Q52M75 96 aa3.12□□□□□ -1.91
RAPGEF4-203ENST00000397087 MYCBP2O75592 4640 aa3.1□□□□□ -1.91
RAPGEF4-203ENST00000397087 RYR1P21817 5038 aa3.1□□□□□ -1.91
RAPGEF4-203ENST00000397087 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
RAPGEF4-203ENST00000397087 LRP1Q07954 4544 aaKnown RBP3.1□□□□□ -1.91
RAPGEF4-203ENST00000397087 SPINT4Q6UDR6 99 aa3.1□□□□□ -1.91
RAPGEF4-203ENST00000397087 H1FX-AS1Q4G0G2 97 aa3.09□□□□□ -1.92
RAPGEF4-203ENST00000397087 RYR3Q15413 4870 aa3.07□□□□□ -1.92
RAPGEF4-203ENST00000397087 LCE5AQ5TCM9 118 aa3.06□□□□□ -1.92
RAPGEF4-203ENST00000397087 KRTAP4-7Q9BYR0 210 aa3.04□□□□□ -1.92
RAPGEF4-203ENST00000397087 S4R3F8 94 aa3.04□□□□□ -1.92
RAPGEF4-203ENST00000397087 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
RAPGEF4-203ENST00000397087 KRTAP10-6P60371 365 aaPredicted RBP3.02□□□□□ -1.93
RAPGEF4-203ENST00000397087 KRTAP17-1Q9BYP8 105 aa3.01□□□□□ -1.93
RAPGEF4-203ENST00000397087 SEC61BP60468 96 aaKnown RBP3.01□□□□□ -1.93
RAPGEF4-203ENST00000397087 M0QZ58 72 aa3□□□□□ -1.93
RAPGEF4-203ENST00000397087 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
RAPGEF4-203ENST00000397087 EPPK1P58107 5090 aaKnown RBP2.99□□□□□ -1.93
RAPGEF4-203ENST00000397087 KRTAP4-2Q9BYR5 136 aa2.98□□□□□ -1.93
RAPGEF4-203ENST00000397087 KRTAP4-11Q9BYQ6 195 aa2.97□□□□□ -1.93
RAPGEF4-203ENST00000397087 P0C880 135 aa2.96□□□□□ -1.93
RAPGEF4-203ENST00000397087 KIAA1109Q2LD37 5005 aa2.96□□□□□ -1.94
RAPGEF4-203ENST00000397087 KRTAP19-2Q3LHN2 52 aa2.95□□□□□ -1.94
RAPGEF4-203ENST00000397087 KRTAP25-1Q3LHN0 102 aa2.94□□□□□ -1.94
RAPGEF4-203ENST00000397087 ROMO1P60602 79 aa2.94□□□□□ -1.94
RAPGEF4-203ENST00000397087 LPAP08519 4548 aa2.92□□□□□ -1.94
RAPGEF4-203ENST00000397087 BIRC6Q9NR09 4857 aa2.92□□□□□ -1.94
RAPGEF4-203ENST00000397087 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
RAPGEF4-203ENST00000397087 KRTAP13-4Q3LI77 160 aa2.91□□□□□ -1.94
RAPGEF4-203ENST00000397087 R4GN34 69 aa2.91□□□□□ -1.94
RAPGEF4-203ENST00000397087 HERC2O95714 4834 aa2.87□□□□□ -1.95
RAPGEF4-203ENST00000397087 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
RAPGEF4-203ENST00000397087 CAMK2N1Q7Z7J9 78 aa2.86□□□□□ -1.95
RAPGEF4-203ENST00000397087 KRTAP4-5Q9BYR2 181 aa2.86□□□□□ -1.95
RAPGEF4-203ENST00000397087 KRTAP12-2P59991 146 aa2.86□□□□□ -1.95
RAPGEF4-203ENST00000397087 HERC1Q15751 4861 aa2.86□□□□□ -1.95
RAPGEF4-203ENST00000397087 LRP2P98164 4655 aa2.85□□□□□ -1.95
RAPGEF4-203ENST00000397087 KRTAP12-1P59990 96 aa2.84□□□□□ -1.95
RAPGEF4-203ENST00000397087 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
RAPGEF4-203ENST00000397087 FLGP20930 4061 aaPredicted RBP2.82□□□□□ -1.96
RAPGEF4-203ENST00000397087 M0R2T5 61 aa2.8□□□□□ -1.96
RAPGEF4-203ENST00000397087 KRTAP4-1Q9BYQ7 146 aa2.79□□□□□ -1.96
RAPGEF4-203ENST00000397087 ABCA13Q86UQ4 5058 aa2.79□□□□□ -1.96
RAPGEF4-203ENST00000397087 PP632Q6XCG6 107 aa2.76□□□□□ -1.97
RAPGEF4-203ENST00000397087 LUZP6Q538Z0 58 aa2.75□□□□□ -1.97
RAPGEF4-203ENST00000397087 MUC2Q02817 5179 aa2.75□□□□□ -1.97
RAPGEF4-203ENST00000397087 SPRR2GQ9BYE4 73 aa2.74□□□□□ -1.97
RAPGEF4-203ENST00000397087 KRTAP19-8Q3LI54 63 aa2.67□□□□□ -1.98
RAPGEF4-203ENST00000397087 PLAC4Q8WY50 150 aa2.65□□□□□ -1.99
RAPGEF4-203ENST00000397087 HMCN2Q8NDA2 5059 aa2.64□□□□□ -1.99
RAPGEF4-203ENST00000397087 MT1HP80294 61 aa2.63□□□□□ -1.99
RAPGEF4-203ENST00000397087 LCE1AQ5T7P2 110 aa2.63□□□□□ -1.99
RAPGEF4-203ENST00000397087 UBR4Q5T4S7 5183 aa2.63□□□□□ -1.99
RAPGEF4-203ENST00000397087 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
RAPGEF4-203ENST00000397087 RNF213Q63HN8 5207 aa2.61□□□□□ -1.99
RAPGEF4-203ENST00000397087 TNP1P09430 55 aa2.59□□□□□ -1.99
RAPGEF4-203ENST00000397087 KRTAP9-8Q9BYQ0 159 aa2.59□□□□□ -2
RAPGEF4-203ENST00000397087 KRTAP10-10P60014 251 aa2.58□□□□□ -2
RAPGEF4-203ENST00000397087 SPRR5A0A1B0GTR4 108 aa2.57□□□□□ -2
RAPGEF4-203ENST00000397087 MT2AP02795 61 aa2.57□□□□□ -2
RAPGEF4-203ENST00000397087 MT1FP04733 61 aa2.52□□□□□ -2.01
RAPGEF4-203ENST00000397087 MT1BP07438 61 aa2.49□□□□□ -2.01
RAPGEF4-203ENST00000397087 KRTAP8-1Q8IUC2 63 aa2.49□□□□□ -2.01
RAPGEF4-203ENST00000397087 KRTAP5-3Q6L8H2 238 aa2.46□□□□□ -2.02
RAPGEF4-203ENST00000397087 KRTAP10-5P60370 271 aa2.45□□□□□ -2.02
RAPGEF4-203ENST00000397087 MT1XP80297 61 aa2.44□□□□□ -2.02
RAPGEF4-203ENST00000397087 PRO2289Q9P1D8 64 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms