RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 A0A1B0GU33 70 aa8.03□□□□□ -1.12
MCF2L-205ENST00000397017 RYR1P21817 5038 aa8.02□□□□□ -1.12
MCF2L-205ENST00000397017 MYCBP2O75592 4640 aa8.02□□□□□ -1.13
MCF2L-205ENST00000397017 APOBP04114 4563 aaKnown RBP7.99□□□□□ -1.13
MCF2L-205ENST00000397017 SPATA8Q6RVD6 105 aa7.98□□□□□ -1.13
MCF2L-205ENST00000397017 SPINT4Q6UDR6 99 aa7.98□□□□□ -1.13
MCF2L-205ENST00000397017 LRP1Q07954 4544 aaKnown RBP7.98□□□□□ -1.13
MCF2L-205ENST00000397017 M0R2T5 61 aa7.97□□□□□ -1.13
MCF2L-205ENST00000397017 MT1HL1P0DM35 61 aa7.95□□□□□ -1.14
MCF2L-205ENST00000397017 RYR2Q92736 4967 aa7.94□□□□□ -1.14
MCF2L-205ENST00000397017 FAT2Q9NYQ8 4349 aa7.92□□□□□ -1.14
MCF2L-205ENST00000397017 FAT3Q8TDW7 4589 aa7.91□□□□□ -1.14
MCF2L-205ENST00000397017 H1FX-AS1Q4G0G2 97 aa7.87□□□□□ -1.15
MCF2L-205ENST00000397017 KRTAP17-1Q9BYP8 105 aa7.87□□□□□ -1.15
MCF2L-205ENST00000397017 TPRXLQ17RH7 258 aa7.86□□□□□ -1.15
MCF2L-205ENST00000397017 PKD1P98161 4303 aa7.78□□□□□ -1.16
MCF2L-205ENST00000397017 R4GN34 69 aa7.78□□□□□ -1.16
MCF2L-205ENST00000397017 KRTAP3-1Q9BYR8 98 aa7.78□□□□□ -1.16
MCF2L-205ENST00000397017 A0A0A0MQY5 61 aa7.76□□□□□ -1.17
MCF2L-205ENST00000397017 M0QZ58 72 aa7.74□□□□□ -1.17
MCF2L-205ENST00000397017 ROMO1P60602 79 aa7.72□□□□□ -1.17
MCF2L-205ENST00000397017 NDUFAF8A1L188 74 aa7.69□□□□□ -1.18
MCF2L-205ENST00000397017 EPPK1P58107 5090 aaKnown RBP7.67□□□□□ -1.18
MCF2L-205ENST00000397017 P0C880 135 aa7.64□□□□□ -1.19
MCF2L-205ENST00000397017 CAMK2N1Q7Z7J9 78 aa7.61□□□□□ -1.19
MCF2L-205ENST00000397017 HSPG2P98160 4391 aa7.61□□□□□ -1.19
MCF2L-205ENST00000397017 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
MCF2L-205ENST00000397017 HERC2O95714 4834 aa7.57□□□□□ -1.2
MCF2L-205ENST00000397017 H0YAA0 97 aa7.56□□□□□ -1.2
MCF2L-205ENST00000397017 LRP2P98164 4655 aa7.53□□□□□ -1.2
MCF2L-205ENST00000397017 C10orf95Q9H7T3 257 aa7.42□□□□□ -1.22
MCF2L-205ENST00000397017 KRTAP3-3Q9BYR6 98 aa7.37□□□□□ -1.23
MCF2L-205ENST00000397017 LPAP08519 4548 aa7.37□□□□□ -1.23
MCF2L-205ENST00000397017 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
MCF2L-205ENST00000397017 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
MCF2L-205ENST00000397017 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
MCF2L-205ENST00000397017 KRTAP10-6P60371 365 aaPredicted RBP7.31□□□□□ -1.24
MCF2L-205ENST00000397017 LUZP6Q538Z0 58 aa7.31□□□□□ -1.24
MCF2L-205ENST00000397017 PKHD1L1Q86WI1 4243 aa7.29□□□□□ -1.24
MCF2L-205ENST00000397017 BIRC6Q9NR09 4857 aa7.26□□□□□ -1.25
MCF2L-205ENST00000397017 KRTAP10-10P60014 251 aa7.26□□□□□ -1.25
MCF2L-205ENST00000397017 PLAC4Q8WY50 150 aa7.21□□□□□ -1.26
MCF2L-205ENST00000397017 KRTAP3-2Q9BYR7 98 aa7.2□□□□□ -1.26
MCF2L-205ENST00000397017 KRTAP12-2P59991 146 aa7.2□□□□□ -1.26
MCF2L-205ENST00000397017 TNXBP22105 4242 aa7.17□□□□□ -1.26
MCF2L-205ENST00000397017 HERC1Q15751 4861 aa7.16□□□□□ -1.26
MCF2L-205ENST00000397017 LORP23490 312 aaPredicted RBP7.09□□□□□ -1.27
MCF2L-205ENST00000397017 MUC2Q02817 5179 aa7.09□□□□□ -1.27
MCF2L-205ENST00000397017 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
MCF2L-205ENST00000397017 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
MCF2L-205ENST00000397017 PCLOQ9Y6V0 5065 aa6.95□□□□□ -1.3
MCF2L-205ENST00000397017 TNP1P09430 55 aa6.89□□□□□ -1.31
MCF2L-205ENST00000397017 UBR4Q5T4S7 5183 aa6.86□□□□□ -1.31
MCF2L-205ENST00000397017 FAT4Q6V0I7 4981 aa6.83□□□□□ -1.32
MCF2L-205ENST00000397017 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
MCF2L-205ENST00000397017 MT1HP80294 61 aa6.75□□□□□ -1.33
MCF2L-205ENST00000397017 HMCN2Q8NDA2 5059 aa6.66□□□□□ -1.34
MCF2L-205ENST00000397017 MT2AP02795 61 aa6.59□□□□□ -1.35
MCF2L-205ENST00000397017 MT1FP04733 61 aa6.58□□□□□ -1.36
MCF2L-205ENST00000397017 FSIP2Q5CZC0 6907 aa6.57□□□□□ -1.36
MCF2L-205ENST00000397017 LCE2CQ5TA81 110 aa6.56□□□□□ -1.36
MCF2L-205ENST00000397017 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
MCF2L-205ENST00000397017 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
MCF2L-205ENST00000397017 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
MCF2L-205ENST00000397017 MUC17Q685J3 4493 aa6.48□□□□□ -1.37
MCF2L-205ENST00000397017 FLGP20930 4061 aaPredicted RBP6.43□□□□□ -1.38
MCF2L-205ENST00000397017 KRTAP19-1Q8IUB9 90 aa6.38□□□□□ -1.39
MCF2L-205ENST00000397017 SPRR2GQ9BYE4 73 aa6.35□□□□□ -1.39
MCF2L-205ENST00000397017 KRTAP9-8Q9BYQ0 159 aa6.34□□□□□ -1.39
MCF2L-205ENST00000397017 LCE3AQ5TA76 89 aa6.26□□□□□ -1.41
MCF2L-205ENST00000397017 KRTAP10-12P60413 245 aa6.24□□□□□ -1.41
MCF2L-205ENST00000397017 MT1BP07438 61 aa6.11□□□□□ -1.43
MCF2L-205ENST00000397017 USH2AO75445 5202 aa6.11□□□□□ -1.43
MCF2L-205ENST00000397017 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
MCF2L-205ENST00000397017 KRTAP12-3P60328 96 aa6.06□□□□□ -1.44
MCF2L-205ENST00000397017 KRTAP19-8Q3LI54 63 aa6.04□□□□□ -1.44
MCF2L-205ENST00000397017 LCE2BO14633 110 aa6.01□□□□□ -1.45
MCF2L-205ENST00000397017 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
MCF2L-205ENST00000397017 MT1XP80297 61 aa6.01□□□□□ -1.45
MCF2L-205ENST00000397017 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
MCF2L-205ENST00000397017 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.47
MCF2L-205ENST00000397017 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
MCF2L-205ENST00000397017 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
MCF2L-205ENST00000397017 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
MCF2L-205ENST00000397017 KRTAP8-1Q8IUC2 63 aa5.82□□□□□ -1.48
MCF2L-205ENST00000397017 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
MCF2L-205ENST00000397017 KRTAP23-1A1A580 65 aa5.8□□□□□ -1.48
MCF2L-205ENST00000397017 KMT2DO14686 5537 aa5.76□□□□□ -1.49
MCF2L-205ENST00000397017 SPRR2FQ96RM1 72 aa5.62□□□□□ -1.51
MCF2L-205ENST00000397017 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
MCF2L-205ENST00000397017 INE1O15225 51 aa5.53□□□□□ -1.52
MCF2L-205ENST00000397017 KRTAP4-7Q9BYR0 210 aa5.5□□□□□ -1.53
MCF2L-205ENST00000397017 SSPOA2VEC9 5147 aa5.47□□□□□ -1.53
MCF2L-205ENST00000397017 LCE3CQ5T5A8 94 aa5.46□□□□□ -1.54
MCF2L-205ENST00000397017 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
MCF2L-205ENST00000397017 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
MCF2L-205ENST00000397017 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
MCF2L-205ENST00000397017 KRTAP19-6Q3LI70 58 aa5.37□□□□□ -1.55
MCF2L-205ENST00000397017 FCGBPQ9Y6R7 5405 aaPredicted RBP5.36□□□□□ -1.55
MCF2L-205ENST00000397017 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 125.9 ms