RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 R4GN34 69 aa6.11□□□□□ -1.43
ATN1-202ENST00000396684 RYR2Q92736 4967 aa6.1□□□□□ -1.43
ATN1-202ENST00000396684 SPATA8Q6RVD6 105 aa6.08□□□□□ -1.44
ATN1-202ENST00000396684 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
ATN1-202ENST00000396684 M0QZ58 72 aa6.04□□□□□ -1.44
ATN1-202ENST00000396684 KIAA1109Q2LD37 5005 aa6.03□□□□□ -1.44
ATN1-202ENST00000396684 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
ATN1-202ENST00000396684 PKHD1P08F94 4074 aa6□□□□□ -1.45
ATN1-202ENST00000396684 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
ATN1-202ENST00000396684 KMT2CQ8NEZ4 4911 aaKnown RBP5.99□□□□□ -1.45
ATN1-202ENST00000396684 RYR3Q15413 4870 aa5.99□□□□□ -1.45
ATN1-202ENST00000396684 APOBP04114 4563 aaKnown RBP5.97□□□□□ -1.45
ATN1-202ENST00000396684 PKD1P98161 4303 aa5.96□□□□□ -1.45
ATN1-202ENST00000396684 CAMK2N1Q7Z7J9 78 aa5.95□□□□□ -1.46
ATN1-202ENST00000396684 KRTAP17-1Q9BYP8 105 aa5.94□□□□□ -1.46
ATN1-202ENST00000396684 RYR1P21817 5038 aa5.93□□□□□ -1.46
ATN1-202ENST00000396684 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
ATN1-202ENST00000396684 P0C880 135 aa5.86□□□□□ -1.47
ATN1-202ENST00000396684 H0YAA0 97 aa5.86□□□□□ -1.47
ATN1-202ENST00000396684 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
ATN1-202ENST00000396684 LRP1Q07954 4544 aaKnown RBP5.84□□□□□ -1.47
ATN1-202ENST00000396684 ROMO1P60602 79 aa5.82□□□□□ -1.48
ATN1-202ENST00000396684 LUZP6Q538Z0 58 aa5.8□□□□□ -1.48
ATN1-202ENST00000396684 HSPG2P98160 4391 aa5.79□□□□□ -1.48
ATN1-202ENST00000396684 PLAC4Q8WY50 150 aa5.74□□□□□ -1.49
ATN1-202ENST00000396684 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
ATN1-202ENST00000396684 MYCBP2O75592 4640 aa5.71□□□□□ -1.5
ATN1-202ENST00000396684 C10orf95Q9H7T3 257 aa5.7□□□□□ -1.5
ATN1-202ENST00000396684 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
ATN1-202ENST00000396684 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
ATN1-202ENST00000396684 KRTAP10-10P60014 251 aa5.65□□□□□ -1.5
ATN1-202ENST00000396684 HERC2O95714 4834 aa5.65□□□□□ -1.5
ATN1-202ENST00000396684 BIRC6Q9NR09 4857 aa5.64□□□□□ -1.51
ATN1-202ENST00000396684 FAT3Q8TDW7 4589 aa5.64□□□□□ -1.51
ATN1-202ENST00000396684 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
ATN1-202ENST00000396684 KRTAP3-2Q9BYR7 98 aa5.62□□□□□ -1.51
ATN1-202ENST00000396684 KRTAP4-1Q9BYQ7 146 aa5.62□□□□□ -1.51
ATN1-202ENST00000396684 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
ATN1-202ENST00000396684 KRTAP12-2P59991 146 aa5.54□□□□□ -1.52
ATN1-202ENST00000396684 KRTAP12-1P59990 96 aa5.53□□□□□ -1.52
ATN1-202ENST00000396684 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
ATN1-202ENST00000396684 TNXBP22105 4242 aa5.49□□□□□ -1.53
ATN1-202ENST00000396684 TNP1P09430 55 aa5.48□□□□□ -1.53
ATN1-202ENST00000396684 LRP2P98164 4655 aa5.47□□□□□ -1.53
ATN1-202ENST00000396684 ABCA13Q86UQ4 5058 aa5.47□□□□□ -1.53
ATN1-202ENST00000396684 LORP23490 312 aaPredicted RBP5.37□□□□□ -1.55
ATN1-202ENST00000396684 LPAP08519 4548 aa5.36□□□□□ -1.55
ATN1-202ENST00000396684 PP632Q6XCG6 107 aa5.33□□□□□ -1.56
ATN1-202ENST00000396684 MT1HP80294 61 aa5.31□□□□□ -1.56
ATN1-202ENST00000396684 PRO2289Q9P1D8 64 aa5.31□□□□□ -1.56
ATN1-202ENST00000396684 HERC1Q15751 4861 aa5.27□□□□□ -1.57
ATN1-202ENST00000396684 PCLOQ9Y6V0 5065 aa5.21□□□□□ -1.57
ATN1-202ENST00000396684 MT2AP02795 61 aa5.18□□□□□ -1.58
ATN1-202ENST00000396684 LCE2CQ5TA81 110 aa5.15□□□□□ -1.59
ATN1-202ENST00000396684 KRTAP19-2Q3LHN2 52 aa5.14□□□□□ -1.59
ATN1-202ENST00000396684 MT1FP04733 61 aa5.12□□□□□ -1.59
ATN1-202ENST00000396684 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
ATN1-202ENST00000396684 KRTAP15-1Q3LI76 137 aa5.06□□□□□ -1.6
ATN1-202ENST00000396684 HMCN2Q8NDA2 5059 aa5.05□□□□□ -1.6
ATN1-202ENST00000396684 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
ATN1-202ENST00000396684 KRTAP9-8Q9BYQ0 159 aa4.98□□□□□ -1.61
ATN1-202ENST00000396684 MUC17Q685J3 4493 aa4.96□□□□□ -1.61
ATN1-202ENST00000396684 FLGP20930 4061 aaPredicted RBP4.95□□□□□ -1.62
ATN1-202ENST00000396684 RNF213Q63HN8 5207 aa4.94□□□□□ -1.62
ATN1-202ENST00000396684 KRTAP10-12P60413 245 aa4.93□□□□□ -1.62
ATN1-202ENST00000396684 MUC2Q02817 5179 aa4.93□□□□□ -1.62
ATN1-202ENST00000396684 UBR4Q5T4S7 5183 aa4.91□□□□□ -1.62
ATN1-202ENST00000396684 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
ATN1-202ENST00000396684 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
ATN1-202ENST00000396684 FAT4Q6V0I7 4981 aa4.87□□□□□ -1.63
ATN1-202ENST00000396684 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
ATN1-202ENST00000396684 KRTAP9-3Q9BYQ3 159 aa4.81□□□□□ -1.64
ATN1-202ENST00000396684 MT1BP07438 61 aa4.79□□□□□ -1.64
ATN1-202ENST00000396684 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
ATN1-202ENST00000396684 LCE2AQ5TA79 106 aaPredicted RBP4.72□□□□□ -1.65
ATN1-202ENST00000396684 MT1XP80297 61 aa4.7□□□□□ -1.66
ATN1-202ENST00000396684 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
ATN1-202ENST00000396684 LCE2BO14633 110 aa4.66□□□□□ -1.66
ATN1-202ENST00000396684 KRTAP10-7P60409 375 aaPredicted RBP4.61□□□□□ -1.67
ATN1-202ENST00000396684 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
ATN1-202ENST00000396684 KRTAP19-5Q3LI72 72 aa4.51□□□□□ -1.69
ATN1-202ENST00000396684 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
ATN1-202ENST00000396684 KRTAP4-8A0A0G2JLE6 195 aa4.41□□□□□ -1.7
ATN1-202ENST00000396684 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
ATN1-202ENST00000396684 KRTAP19-6Q3LI70 58 aa4.37□□□□□ -1.71
ATN1-202ENST00000396684 SPRR2FQ96RM1 72 aa4.35□□□□□ -1.71
ATN1-202ENST00000396684 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
ATN1-202ENST00000396684 INE1O15225 51 aa4.34□□□□□ -1.71
ATN1-202ENST00000396684 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
ATN1-202ENST00000396684 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
ATN1-202ENST00000396684 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
ATN1-202ENST00000396684 KRTAP9-2Q9BYQ4 174 aa4.31□□□□□ -1.72
ATN1-202ENST00000396684 CRCT1Q9UGL9 99 aa4.31□□□□□ -1.72
ATN1-202ENST00000396684 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
ATN1-202ENST00000396684 USH2AO75445 5202 aa4.21□□□□□ -1.74
ATN1-202ENST00000396684 MT1EP04732 61 aa4.16□□□□□ -1.74
ATN1-202ENST00000396684 MT1LQ93083 61 aa4.12□□□□□ -1.75
ATN1-202ENST00000396684 MT1GP13640 62 aa4.12□□□□□ -1.75
ATN1-202ENST00000396684 KRTAP19-7Q3SYF9 63 aa4.12□□□□□ -1.75
ATN1-202ENST00000396684 KRTAP19-3Q7Z4W3 81 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms