RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 KRTAP10-8P60410 259 aa7.05□□□□□ -1.28
TRIM40-207ENST00000396581 LRP1Q07954 4544 aaKnown RBP7.05□□□□□ -1.28
TRIM40-207ENST00000396581 KRTAP25-1Q3LHN0 102 aa7.04□□□□□ -1.28
TRIM40-207ENST00000396581 COX6B2Q6YFQ2 88 aa7.03□□□□□ -1.28
TRIM40-207ENST00000396581 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
TRIM40-207ENST00000396581 TNXBP22105 4242 aa7□□□□□ -1.29
TRIM40-207ENST00000396581 MYCBP2O75592 4640 aa6.96□□□□□ -1.3
TRIM40-207ENST00000396581 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
TRIM40-207ENST00000396581 FAT3Q8TDW7 4589 aa6.94□□□□□ -1.3
TRIM40-207ENST00000396581 K7ERS5 55 aa6.92□□□□□ -1.3
TRIM40-207ENST00000396581 KRTAP4-5Q9BYR2 181 aa6.9□□□□□ -1.3
TRIM40-207ENST00000396581 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
TRIM40-207ENST00000396581 KRTAP3-3Q9BYR6 98 aa6.88□□□□□ -1.31
TRIM40-207ENST00000396581 ROMO1P60602 79 aa6.86□□□□□ -1.31
TRIM40-207ENST00000396581 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
TRIM40-207ENST00000396581 KRTAP3-2Q9BYR7 98 aa6.83□□□□□ -1.32
TRIM40-207ENST00000396581 H3BS24 57 aa6.81□□□□□ -1.32
TRIM40-207ENST00000396581 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
TRIM40-207ENST00000396581 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
TRIM40-207ENST00000396581 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
TRIM40-207ENST00000396581 S4R3F8 94 aa6.73□□□□□ -1.33
TRIM40-207ENST00000396581 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
TRIM40-207ENST00000396581 HERC2O95714 4834 aa6.72□□□□□ -1.33
TRIM40-207ENST00000396581 XP32Q5T750 250 aa6.71□□□□□ -1.34
TRIM40-207ENST00000396581 A0A0D9SG42 100 aa6.67□□□□□ -1.34
TRIM40-207ENST00000396581 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
TRIM40-207ENST00000396581 P0C880 135 aa6.66□□□□□ -1.34
TRIM40-207ENST00000396581 J3QL48 77 aa6.65□□□□□ -1.35
TRIM40-207ENST00000396581 KRTAP12-2P59991 146 aa6.59□□□□□ -1.35
TRIM40-207ENST00000396581 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
TRIM40-207ENST00000396581 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
TRIM40-207ENST00000396581 LRP2P98164 4655 aa6.54□□□□□ -1.36
TRIM40-207ENST00000396581 LPAP08519 4548 aa6.52□□□□□ -1.37
TRIM40-207ENST00000396581 SPINT4Q6UDR6 99 aa6.51□□□□□ -1.37
TRIM40-207ENST00000396581 M0QZ58 72 aa6.5□□□□□ -1.37
TRIM40-207ENST00000396581 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
TRIM40-207ENST00000396581 KRTAP15-1Q3LI76 137 aa6.48□□□□□ -1.37
TRIM40-207ENST00000396581 SEC61BP60468 96 aaKnown RBP6.41□□□□□ -1.38
TRIM40-207ENST00000396581 HERC1Q15751 4861 aa6.38□□□□□ -1.39
TRIM40-207ENST00000396581 NDUFAF8A1L188 74 aa6.29□□□□□ -1.4
TRIM40-207ENST00000396581 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
TRIM40-207ENST00000396581 KRTAP4-1Q9BYQ7 146 aa6.28□□□□□ -1.4
TRIM40-207ENST00000396581 R4GN34 69 aa6.24□□□□□ -1.41
TRIM40-207ENST00000396581 MUC17Q685J3 4493 aa6.23□□□□□ -1.41
TRIM40-207ENST00000396581 MUC2Q02817 5179 aa6.2□□□□□ -1.42
TRIM40-207ENST00000396581 KRTAP19-2Q3LHN2 52 aa6.16□□□□□ -1.42
TRIM40-207ENST00000396581 LORP23490 312 aaPredicted RBP6.15□□□□□ -1.42
TRIM40-207ENST00000396581 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
TRIM40-207ENST00000396581 UBR4Q5T4S7 5183 aa6.05□□□□□ -1.44
TRIM40-207ENST00000396581 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
TRIM40-207ENST00000396581 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
TRIM40-207ENST00000396581 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
TRIM40-207ENST00000396581 RNF213Q63HN8 5207 aa5.95□□□□□ -1.46
TRIM40-207ENST00000396581 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
TRIM40-207ENST00000396581 FAT4Q6V0I7 4981 aa5.9□□□□□ -1.47
TRIM40-207ENST00000396581 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
TRIM40-207ENST00000396581 MT1HP80294 61 aa5.83□□□□□ -1.48
TRIM40-207ENST00000396581 LUZP6Q538Z0 58 aa5.81□□□□□ -1.48
TRIM40-207ENST00000396581 TNP1P09430 55 aa5.77□□□□□ -1.49
TRIM40-207ENST00000396581 M0R2T5 61 aa5.75□□□□□ -1.49
TRIM40-207ENST00000396581 SPRR5A0A1B0GTR4 108 aa5.74□□□□□ -1.49
TRIM40-207ENST00000396581 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
TRIM40-207ENST00000396581 A0A0A0MQY5 61 aa5.63□□□□□ -1.51
TRIM40-207ENST00000396581 SPRR2GQ9BYE4 73 aa5.63□□□□□ -1.51
TRIM40-207ENST00000396581 MT2AP02795 61 aa5.61□□□□□ -1.51
TRIM40-207ENST00000396581 MT1FP04733 61 aa5.59□□□□□ -1.52
TRIM40-207ENST00000396581 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
TRIM40-207ENST00000396581 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
TRIM40-207ENST00000396581 LCE2AQ5TA79 106 aaPredicted RBP5.55□□□□□ -1.52
TRIM40-207ENST00000396581 LCE3AQ5TA76 89 aa5.44□□□□□ -1.54
TRIM40-207ENST00000396581 KRTAP9-3Q9BYQ3 159 aa5.44□□□□□ -1.54
TRIM40-207ENST00000396581 KRTAP19-8Q3LI54 63 aa5.39□□□□□ -1.55
TRIM40-207ENST00000396581 KRTAP8-1Q8IUC2 63 aa5.38□□□□□ -1.55
TRIM40-207ENST00000396581 MT1BP07438 61 aa5.32□□□□□ -1.56
TRIM40-207ENST00000396581 KRTAP10-5P60370 271 aa5.27□□□□□ -1.57
TRIM40-207ENST00000396581 LCE2BO14633 110 aa5.26□□□□□ -1.57
TRIM40-207ENST00000396581 MT1XP80297 61 aa5.25□□□□□ -1.57
TRIM40-207ENST00000396581 KRTAP12-3P60328 96 aa5.18□□□□□ -1.58
TRIM40-207ENST00000396581 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
TRIM40-207ENST00000396581 PRO2289Q9P1D8 64 aa5.17□□□□□ -1.58
TRIM40-207ENST00000396581 INE1O15225 51 aa5.15□□□□□ -1.59
TRIM40-207ENST00000396581 USH2AO75445 5202 aa5.11□□□□□ -1.59
TRIM40-207ENST00000396581 KRTAP10-7P60409 375 aaPredicted RBP5.09□□□□□ -1.59
TRIM40-207ENST00000396581 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
TRIM40-207ENST00000396581 FSIP2Q5CZC0 6907 aa4.94□□□□□ -1.62
TRIM40-207ENST00000396581 KRTAP19-6Q3LI70 58 aa4.92□□□□□ -1.62
TRIM40-207ENST00000396581 LCE3CQ5T5A8 94 aa4.91□□□□□ -1.62
TRIM40-207ENST00000396581 SSPOA2VEC9 5147 aa4.91□□□□□ -1.62
TRIM40-207ENST00000396581 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.62
TRIM40-207ENST00000396581 KRTAP4-8A0A0G2JLE6 195 aa4.75□□□□□ -1.65
TRIM40-207ENST00000396581 KRTAP4-8Q9BYQ9 185 aa4.75□□□□□ -1.65
TRIM40-207ENST00000396581 KMT2DO14686 5537 aa4.75□□□□□ -1.65
TRIM40-207ENST00000396581 KRTAP9-6A8MVA2 160 aa4.74□□□□□ -1.65
TRIM40-207ENST00000396581 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
TRIM40-207ENST00000396581 KRTAP19-4Q3LI73 84 aa4.7□□□□□ -1.66
TRIM40-207ENST00000396581 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
TRIM40-207ENST00000396581 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
TRIM40-207ENST00000396581 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
TRIM40-207ENST00000396581 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
TRIM40-207ENST00000396581 KRTAP19-7Q3SYF9 63 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms