RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LRP1Q07954 4544 aaKnown RBP5.95□□□□□ -1.46
PDXDC1-202ENST00000396410 ADM2Q7Z4H4 148 aa5.95□□□□□ -1.46
PDXDC1-202ENST00000396410 MT1HL1P0DM35 61 aa5.94□□□□□ -1.46
PDXDC1-202ENST00000396410 FAT3Q8TDW7 4589 aa5.9□□□□□ -1.46
PDXDC1-202ENST00000396410 TPRXLQ17RH7 258 aa5.9□□□□□ -1.46
PDXDC1-202ENST00000396410 CSAG1Q6PB30 78 aa5.9□□□□□ -1.47
PDXDC1-202ENST00000396410 HSPG2P98160 4391 aa5.89□□□□□ -1.47
PDXDC1-202ENST00000396410 RYR1P21817 5038 aa5.88□□□□□ -1.47
PDXDC1-202ENST00000396410 RYR3Q15413 4870 aa5.85□□□□□ -1.47
PDXDC1-202ENST00000396410 KIAA1109Q2LD37 5005 aa5.85□□□□□ -1.47
PDXDC1-202ENST00000396410 SEC61BP60468 96 aaKnown RBP5.85□□□□□ -1.47
PDXDC1-202ENST00000396410 KRTAP17-1Q9BYP8 105 aa5.85□□□□□ -1.47
PDXDC1-202ENST00000396410 TNXBP22105 4242 aa5.82□□□□□ -1.48
PDXDC1-202ENST00000396410 MYCBP2O75592 4640 aa5.82□□□□□ -1.48
PDXDC1-202ENST00000396410 SPINT4Q6UDR6 99 aa5.8□□□□□ -1.48
PDXDC1-202ENST00000396410 KRTAP3-3Q9BYR6 98 aa5.8□□□□□ -1.48
PDXDC1-202ENST00000396410 LINC01554Q52M75 96 aa5.79□□□□□ -1.48
PDXDC1-202ENST00000396410 KRTAP4-5Q9BYR2 181 aa5.78□□□□□ -1.48
PDXDC1-202ENST00000396410 P0C880 135 aa5.77□□□□□ -1.49
PDXDC1-202ENST00000396410 CRIPTQ9P021 101 aa5.76□□□□□ -1.49
PDXDC1-202ENST00000396410 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
PDXDC1-202ENST00000396410 H3BS24 57 aa5.75□□□□□ -1.49
PDXDC1-202ENST00000396410 ROMO1P60602 79 aa5.74□□□□□ -1.49
PDXDC1-202ENST00000396410 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
PDXDC1-202ENST00000396410 KRTAP3-2Q9BYR7 98 aa5.69□□□□□ -1.5
PDXDC1-202ENST00000396410 KRTAP25-1Q3LHN0 102 aa5.68□□□□□ -1.5
PDXDC1-202ENST00000396410 R4GN34 69 aa5.68□□□□□ -1.5
PDXDC1-202ENST00000396410 M0QZ58 72 aa5.68□□□□□ -1.5
PDXDC1-202ENST00000396410 EPPK1P58107 5090 aaKnown RBP5.66□□□□□ -1.5
PDXDC1-202ENST00000396410 LRP2P98164 4655 aa5.6□□□□□ -1.51
PDXDC1-202ENST00000396410 KRTAP12-2P59991 146 aa5.57□□□□□ -1.52
PDXDC1-202ENST00000396410 LPAP08519 4548 aa5.55□□□□□ -1.52
PDXDC1-202ENST00000396410 KRTAP12-1P59990 96 aa5.52□□□□□ -1.53
PDXDC1-202ENST00000396410 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
PDXDC1-202ENST00000396410 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
PDXDC1-202ENST00000396410 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
PDXDC1-202ENST00000396410 KRTAP4-1Q9BYQ7 146 aa5.46□□□□□ -1.53
PDXDC1-202ENST00000396410 HERC2O95714 4834 aa5.44□□□□□ -1.54
PDXDC1-202ENST00000396410 M0R2T5 61 aa5.41□□□□□ -1.54
PDXDC1-202ENST00000396410 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
PDXDC1-202ENST00000396410 BIRC6Q9NR09 4857 aa5.32□□□□□ -1.56
PDXDC1-202ENST00000396410 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
PDXDC1-202ENST00000396410 PLAC4Q8WY50 150 aa5.22□□□□□ -1.57
PDXDC1-202ENST00000396410 KRTAP19-2Q3LHN2 52 aa5.18□□□□□ -1.58
PDXDC1-202ENST00000396410 A0A0A0MQY5 61 aa5.16□□□□□ -1.58
PDXDC1-202ENST00000396410 TNP1P09430 55 aa5.15□□□□□ -1.59
PDXDC1-202ENST00000396410 MUC2Q02817 5179 aa5.13□□□□□ -1.59
PDXDC1-202ENST00000396410 PP632Q6XCG6 107 aa5.12□□□□□ -1.59
PDXDC1-202ENST00000396410 HERC1Q15751 4861 aa5.12□□□□□ -1.59
PDXDC1-202ENST00000396410 KRTAP10-10P60014 251 aa5.12□□□□□ -1.59
PDXDC1-202ENST00000396410 NDUFAF8A1L188 74 aa5.07□□□□□ -1.6
PDXDC1-202ENST00000396410 PCLOQ9Y6V0 5065 aa5.07□□□□□ -1.6
PDXDC1-202ENST00000396410 FLGP20930 4061 aaPredicted RBP5.06□□□□□ -1.6
PDXDC1-202ENST00000396410 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
PDXDC1-202ENST00000396410 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
PDXDC1-202ENST00000396410 MT1HP80294 61 aa5.01□□□□□ -1.61
PDXDC1-202ENST00000396410 LCE2CQ5TA81 110 aa5□□□□□ -1.61
PDXDC1-202ENST00000396410 LUZP6Q538Z0 58 aa5□□□□□ -1.61
PDXDC1-202ENST00000396410 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
PDXDC1-202ENST00000396410 FAT4Q6V0I7 4981 aa4.92□□□□□ -1.62
PDXDC1-202ENST00000396410 MT2AP02795 61 aa4.91□□□□□ -1.62
PDXDC1-202ENST00000396410 MT1FP04733 61 aa4.89□□□□□ -1.63
PDXDC1-202ENST00000396410 RNF213Q63HN8 5207 aa4.89□□□□□ -1.63
PDXDC1-202ENST00000396410 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
PDXDC1-202ENST00000396410 UBR4Q5T4S7 5183 aa4.86□□□□□ -1.63
PDXDC1-202ENST00000396410 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
PDXDC1-202ENST00000396410 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
PDXDC1-202ENST00000396410 PRO2289Q9P1D8 64 aa4.75□□□□□ -1.65
PDXDC1-202ENST00000396410 LCE3AQ5TA76 89 aa4.74□□□□□ -1.65
PDXDC1-202ENST00000396410 KRTAP19-8Q3LI54 63 aa4.71□□□□□ -1.66
PDXDC1-202ENST00000396410 KRTAP10-12P60413 245 aa4.66□□□□□ -1.66
PDXDC1-202ENST00000396410 MT1BP07438 61 aa4.65□□□□□ -1.66
PDXDC1-202ENST00000396410 KRTAP9-3Q9BYQ3 159 aa4.61□□□□□ -1.67
PDXDC1-202ENST00000396410 MT1XP80297 61 aa4.61□□□□□ -1.67
PDXDC1-202ENST00000396410 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
PDXDC1-202ENST00000396410 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
PDXDC1-202ENST00000396410 KRTAP8-1Q8IUC2 63 aa4.53□□□□□ -1.68
PDXDC1-202ENST00000396410 KRTAP10-7P60409 375 aaPredicted RBP4.52□□□□□ -1.69
PDXDC1-202ENST00000396410 SPRR5A0A1B0GTR4 108 aa4.45□□□□□ -1.7
PDXDC1-202ENST00000396410 LCE2BO14633 110 aa4.45□□□□□ -1.7
PDXDC1-202ENST00000396410 LCE2AQ5TA79 106 aaPredicted RBP4.39□□□□□ -1.71
PDXDC1-202ENST00000396410 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
PDXDC1-202ENST00000396410 USH2AO75445 5202 aa4.29□□□□□ -1.72
PDXDC1-202ENST00000396410 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
PDXDC1-202ENST00000396410 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
PDXDC1-202ENST00000396410 LCE3CQ5T5A8 94 aa4.23□□□□□ -1.73
PDXDC1-202ENST00000396410 KMT2DO14686 5537 aa4.17□□□□□ -1.74
PDXDC1-202ENST00000396410 FSIP2Q5CZC0 6907 aa4.13□□□□□ -1.75
PDXDC1-202ENST00000396410 KRTAP19-7Q3SYF9 63 aa4.07□□□□□ -1.76
PDXDC1-202ENST00000396410 INE1O15225 51 aa4.06□□□□□ -1.76
PDXDC1-202ENST00000396410 KRTAP19-6Q3LI70 58 aa4.04□□□□□ -1.76
PDXDC1-202ENST00000396410 KRTAP4-7Q9BYR0 210 aa4.03□□□□□ -1.76
PDXDC1-202ENST00000396410 MT1EP04732 61 aa4.02□□□□□ -1.77
PDXDC1-202ENST00000396410 KRTAP19-4Q3LI73 84 aa4.02□□□□□ -1.77
PDXDC1-202ENST00000396410 MT1LQ93083 61 aa4□□□□□ -1.77
PDXDC1-202ENST00000396410 SSPOA2VEC9 5147 aa3.98□□□□□ -1.77
PDXDC1-202ENST00000396410 CRCT1Q9UGL9 99 aa3.94□□□□□ -1.78
PDXDC1-202ENST00000396410 KRTAP9-6A8MVA2 160 aa3.91□□□□□ -1.78
PDXDC1-202ENST00000396410 SPRR2FQ96RM1 72 aa3.89□□□□□ -1.79
PDXDC1-202ENST00000396410 LCE2DQ5TA82 110 aaPredicted RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms