RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 ANAPC11Q9NYG5 84 aa3.03□□□□□ -1.92
VPS41-203ENST00000395969 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
VPS41-203ENST00000395969 FAT1Q14517 4588 aa3□□□□□ -1.93
VPS41-203ENST00000395969 IGKV2-30P06310 120 aa2.99□□□□□ -1.93
VPS41-203ENST00000395969 P0C880 135 aa2.99□□□□□ -1.93
VPS41-203ENST00000395969 SPINT4Q6UDR6 99 aa2.99□□□□□ -1.93
VPS41-203ENST00000395969 IGKV2D-30A0A075B6S6 120 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 NDUFAF8A1L188 74 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 LCE4AQ5TA78 99 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 C20orf166-AS1Q96NR2 134 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 A8MUU9 505 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 Q8N1X5 172 aa2.98□□□□□ -1.93
VPS41-203ENST00000395969 KRTAP25-1Q3LHN0 102 aa2.97□□□□□ -1.93
VPS41-203ENST00000395969 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
VPS41-203ENST00000395969 LINC00304Q8N9R0 145 aa2.95□□□□□ -1.94
VPS41-203ENST00000395969 TYMSOSQ8TAI1 123 aa2.95□□□□□ -1.94
VPS41-203ENST00000395969 KRTAP9-6A0A140TA67 174 aa2.94□□□□□ -1.94
VPS41-203ENST00000395969 K7ERS5 55 aa2.94□□□□□ -1.94
VPS41-203ENST00000395969 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
VPS41-203ENST00000395969 RYR1P21817 5038 aa2.93□□□□□ -1.94
VPS41-203ENST00000395969 KRTAP3-1Q9BYR8 98 aa2.93□□□□□ -1.94
VPS41-203ENST00000395969 H0YAA0 97 aa2.93□□□□□ -1.94
VPS41-203ENST00000395969 MT1HL1P0DM35 61 aa2.92□□□□□ -1.94
VPS41-203ENST00000395969 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
VPS41-203ENST00000395969 KRTAP19-1Q8IUB9 90 aa2.9□□□□□ -1.95
VPS41-203ENST00000395969 C10orf95Q9H7T3 257 aa2.89□□□□□ -1.95
VPS41-203ENST00000395969 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
VPS41-203ENST00000395969 RYR3Q15413 4870 aa2.88□□□□□ -1.95
VPS41-203ENST00000395969 KRTAP19-4Q3LI73 84 aa2.88□□□□□ -1.95
VPS41-203ENST00000395969 Q5VSD8 79 aa2.88□□□□□ -1.95
VPS41-203ENST00000395969 LCE3BQ5TA77 95 aa2.87□□□□□ -1.95
VPS41-203ENST00000395969 CAMK2N1Q7Z7J9 78 aa2.87□□□□□ -1.95
VPS41-203ENST00000395969 A0A0D9SG42 100 aa2.87□□□□□ -1.95
VPS41-203ENST00000395969 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
VPS41-203ENST00000395969 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
VPS41-203ENST00000395969 A0A1B0GU33 70 aa2.85□□□□□ -1.95
VPS41-203ENST00000395969 H1FX-AS1Q4G0G2 97 aa2.85□□□□□ -1.95
VPS41-203ENST00000395969 RPL37P61927 97 aaKnown RBP2.84□□□□□ -1.96
VPS41-203ENST00000395969 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
VPS41-203ENST00000395969 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
VPS41-203ENST00000395969 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
VPS41-203ENST00000395969 KRTAP4-8A0A0G2JLE6 195 aa2.82□□□□□ -1.96
VPS41-203ENST00000395969 LRP1Q07954 4544 aaKnown RBP2.81□□□□□ -1.96
VPS41-203ENST00000395969 MYCBP2O75592 4640 aa2.8□□□□□ -1.96
VPS41-203ENST00000395969 SMR3BP02814 79 aaPredicted RBP2.79□□□□□ -1.96
VPS41-203ENST00000395969 HERC2O95714 4834 aa2.79□□□□□ -1.96
VPS41-203ENST00000395969 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
VPS41-203ENST00000395969 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
VPS41-203ENST00000395969 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
VPS41-203ENST00000395969 BIRC6Q9NR09 4857 aa2.75□□□□□ -1.97
VPS41-203ENST00000395969 KRTAP4-7Q9BYR0 210 aa2.73□□□□□ -1.97
VPS41-203ENST00000395969 C9orf92A6NGG3 77 aa2.73□□□□□ -1.97
VPS41-203ENST00000395969 EPPK1P58107 5090 aaKnown RBP2.73□□□□□ -1.97
VPS41-203ENST00000395969 KRTAP10-6P60371 365 aaPredicted RBP2.71□□□□□ -1.97
VPS41-203ENST00000395969 KRTAP19-2Q3LHN2 52 aa2.71□□□□□ -1.97
VPS41-203ENST00000395969 KRTAP13-4Q3LI77 160 aa2.7□□□□□ -1.98
VPS41-203ENST00000395969 KRTAP4-9Q9BYQ8 210 aa2.69□□□□□ -1.98
VPS41-203ENST00000395969 KRTAP4-5Q9BYR2 181 aa2.69□□□□□ -1.98
VPS41-203ENST00000395969 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
VPS41-203ENST00000395969 ABCA13Q86UQ4 5058 aa2.67□□□□□ -1.98
VPS41-203ENST00000395969 S4R3F8 94 aa2.65□□□□□ -1.99
VPS41-203ENST00000395969 KRTAP12-2P59991 146 aa2.63□□□□□ -1.99
VPS41-203ENST00000395969 R4GN34 69 aa2.62□□□□□ -1.99
VPS41-203ENST00000395969 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
VPS41-203ENST00000395969 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
VPS41-203ENST00000395969 HERC1Q15751 4861 aa2.6□□□□□ -1.99
VPS41-203ENST00000395969 KRTAP4-2Q9BYR5 136 aa2.58□□□□□ -2
VPS41-203ENST00000395969 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
VPS41-203ENST00000395969 KRTAP4-1Q9BYQ7 146 aa2.57□□□□□ -2
VPS41-203ENST00000395969 LCE5AQ5TCM9 118 aa2.57□□□□□ -2
VPS41-203ENST00000395969 PLAC4Q8WY50 150 aa2.57□□□□□ -2
VPS41-203ENST00000395969 FLGP20930 4061 aaPredicted RBP2.56□□□□□ -2
VPS41-203ENST00000395969 M0QZ58 72 aa2.54□□□□□ -2
VPS41-203ENST00000395969 HMCN2Q8NDA2 5059 aa2.54□□□□□ -2
VPS41-203ENST00000395969 PCLOQ9Y6V0 5065 aa2.52□□□□□ -2.01
VPS41-203ENST00000395969 LRP2P98164 4655 aa2.52□□□□□ -2.01
VPS41-203ENST00000395969 LPAP08519 4548 aa2.5□□□□□ -2.01
VPS41-203ENST00000395969 PRO2289Q9P1D8 64 aa2.46□□□□□ -2.02
VPS41-203ENST00000395969 SPRR2GQ9BYE4 73 aa2.45□□□□□ -2.02
VPS41-203ENST00000395969 MT1HP80294 61 aa2.43□□□□□ -2.02
VPS41-203ENST00000395969 PP632Q6XCG6 107 aa2.41□□□□□ -2.02
VPS41-203ENST00000395969 KRTAP19-8Q3LI54 63 aa2.4□□□□□ -2.03
VPS41-203ENST00000395969 KRTAP9-8Q9BYQ0 159 aa2.39□□□□□ -2.03
VPS41-203ENST00000395969 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
VPS41-203ENST00000395969 MT2AP02795 61 aa2.34□□□□□ -2.04
VPS41-203ENST00000395969 MT1FP04733 61 aa2.3□□□□□ -2.04
VPS41-203ENST00000395969 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
VPS41-203ENST00000395969 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
VPS41-203ENST00000395969 MT1BP07438 61 aa2.26□□□□□ -2.05
VPS41-203ENST00000395969 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
VPS41-203ENST00000395969 TNP1P09430 55 aa2.24□□□□□ -2.05
VPS41-203ENST00000395969 INE1O15225 51 aa2.23□□□□□ -2.05
VPS41-203ENST00000395969 KRTAP10-5P60370 271 aa2.2□□□□□ -2.06
VPS41-203ENST00000395969 MT1XP80297 61 aa2.2□□□□□ -2.06
VPS41-203ENST00000395969 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
VPS41-203ENST00000395969 MUC2Q02817 5179 aa2.18□□□□□ -2.06
VPS41-203ENST00000395969 UBR4Q5T4S7 5183 aa2.18□□□□□ -2.06
VPS41-203ENST00000395969 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
VPS41-203ENST00000395969 KRTAP10-12P60413 245 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms