RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 A0A0D9SG42 100 aa5.73□□□□□ -1.49
HIF1A-203ENST00000394997 TYMSOSQ8TAI1 123 aa5.73□□□□□ -1.49
HIF1A-203ENST00000394997 A0A1B0GU33 70 aa5.72□□□□□ -1.49
HIF1A-203ENST00000394997 ABCA13Q86UQ4 5058 aa5.72□□□□□ -1.49
HIF1A-203ENST00000394997 Q5VSD8 79 aa5.69□□□□□ -1.5
HIF1A-203ENST00000394997 KIAA1109Q2LD37 5005 aa5.68□□□□□ -1.5
HIF1A-203ENST00000394997 RPS29P62273 56 aaKnown RBP5.66□□□□□ -1.5
HIF1A-203ENST00000394997 COX6B2Q6YFQ2 88 aa5.63□□□□□ -1.51
HIF1A-203ENST00000394997 KRTAP25-1Q3LHN0 102 aa5.62□□□□□ -1.51
HIF1A-203ENST00000394997 ROMO1P60602 79 aa5.6□□□□□ -1.51
HIF1A-203ENST00000394997 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
HIF1A-203ENST00000394997 LINC00304Q8N9R0 145 aa5.57□□□□□ -1.52
HIF1A-203ENST00000394997 LRP2P98164 4655 aa5.56□□□□□ -1.52
HIF1A-203ENST00000394997 A8MUU9 505 aa5.55□□□□□ -1.52
HIF1A-203ENST00000394997 H1FX-AS1Q4G0G2 97 aa5.55□□□□□ -1.52
HIF1A-203ENST00000394997 KRTAP3-1Q9BYR8 98 aa5.54□□□□□ -1.52
HIF1A-203ENST00000394997 C20orf166-AS1Q96NR2 134 aa5.54□□□□□ -1.52
HIF1A-203ENST00000394997 H0YAA0 97 aa5.52□□□□□ -1.53
HIF1A-203ENST00000394997 KRTAP10-8P60410 259 aa5.51□□□□□ -1.53
HIF1A-203ENST00000394997 M0R2T5 61 aa5.49□□□□□ -1.53
HIF1A-203ENST00000394997 NDUFAF8A1L188 74 aa5.49□□□□□ -1.53
HIF1A-203ENST00000394997 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
HIF1A-203ENST00000394997 MT1HL1P0DM35 61 aa5.45□□□□□ -1.54
HIF1A-203ENST00000394997 C10orf95Q9H7T3 257 aa5.43□□□□□ -1.54
HIF1A-203ENST00000394997 HERC2O95714 4834 aa5.41□□□□□ -1.54
HIF1A-203ENST00000394997 BIRC6Q9NR09 4857 aa5.38□□□□□ -1.55
HIF1A-203ENST00000394997 FLGP20930 4061 aaPredicted RBP5.38□□□□□ -1.55
HIF1A-203ENST00000394997 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
HIF1A-203ENST00000394997 P0C880 135 aa5.29□□□□□ -1.56
HIF1A-203ENST00000394997 KRTAP4-5Q9BYR2 181 aa5.29□□□□□ -1.56
HIF1A-203ENST00000394997 S4R3F8 94 aa5.28□□□□□ -1.56
HIF1A-203ENST00000394997 XP32Q5T750 250 aa5.28□□□□□ -1.56
HIF1A-203ENST00000394997 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
HIF1A-203ENST00000394997 KRTAP19-2Q3LHN2 52 aa5.22□□□□□ -1.57
HIF1A-203ENST00000394997 MUC2Q02817 5179 aa5.21□□□□□ -1.57
HIF1A-203ENST00000394997 KRTAP3-2Q9BYR7 98 aa5.21□□□□□ -1.57
HIF1A-203ENST00000394997 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
HIF1A-203ENST00000394997 LUZP6Q538Z0 58 aa5.2□□□□□ -1.58
HIF1A-203ENST00000394997 HMCN2Q8NDA2 5059 aa5.2□□□□□ -1.58
HIF1A-203ENST00000394997 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
HIF1A-203ENST00000394997 HERC1Q15751 4861 aa5.17□□□□□ -1.58
HIF1A-203ENST00000394997 SEC61BP60468 96 aaKnown RBP5.16□□□□□ -1.58
HIF1A-203ENST00000394997 A0A0A0MQY5 61 aa5.15□□□□□ -1.59
HIF1A-203ENST00000394997 M0QZ58 72 aa5.13□□□□□ -1.59
HIF1A-203ENST00000394997 R4GN34 69 aa5.13□□□□□ -1.59
HIF1A-203ENST00000394997 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
HIF1A-203ENST00000394997 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
HIF1A-203ENST00000394997 CAMK2N1Q7Z7J9 78 aa5.08□□□□□ -1.6
HIF1A-203ENST00000394997 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
HIF1A-203ENST00000394997 PLAC4Q8WY50 150 aa4.99□□□□□ -1.61
HIF1A-203ENST00000394997 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
HIF1A-203ENST00000394997 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
HIF1A-203ENST00000394997 FAT4Q6V0I7 4981 aa4.94□□□□□ -1.62
HIF1A-203ENST00000394997 LORP23490 312 aaPredicted RBP4.86□□□□□ -1.63
HIF1A-203ENST00000394997 UBR4Q5T4S7 5183 aa4.85□□□□□ -1.63
HIF1A-203ENST00000394997 RNF213Q63HN8 5207 aa4.84□□□□□ -1.63
HIF1A-203ENST00000394997 LCE2CQ5TA81 110 aa4.84□□□□□ -1.64
HIF1A-203ENST00000394997 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
HIF1A-203ENST00000394997 TNP1P09430 55 aa4.66□□□□□ -1.66
HIF1A-203ENST00000394997 PP632Q6XCG6 107 aa4.66□□□□□ -1.66
HIF1A-203ENST00000394997 MT1HP80294 61 aa4.54□□□□□ -1.68
HIF1A-203ENST00000394997 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
HIF1A-203ENST00000394997 KRTAP9-8Q9BYQ0 159 aa4.52□□□□□ -1.69
HIF1A-203ENST00000394997 FSIP2Q5CZC0 6907 aa4.51□□□□□ -1.69
HIF1A-203ENST00000394997 SPRR2GQ9BYE4 73 aa4.5□□□□□ -1.69
HIF1A-203ENST00000394997 MT1FP04733 61 aa4.44□□□□□ -1.7
HIF1A-203ENST00000394997 MT2AP02795 61 aa4.42□□□□□ -1.7
HIF1A-203ENST00000394997 KRTAP19-8Q3LI54 63 aa4.35□□□□□ -1.71
HIF1A-203ENST00000394997 MT1BP07438 61 aa4.33□□□□□ -1.72
HIF1A-203ENST00000394997 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
HIF1A-203ENST00000394997 KRTAP10-5P60370 271 aa4.27□□□□□ -1.73
HIF1A-203ENST00000394997 LCE2AQ5TA79 106 aaPredicted RBP4.26□□□□□ -1.73
HIF1A-203ENST00000394997 MT1XP80297 61 aa4.25□□□□□ -1.73
HIF1A-203ENST00000394997 PRO2289Q9P1D8 64 aa4.24□□□□□ -1.73
HIF1A-203ENST00000394997 KRTAP23-1A1A580 65 aa4.24□□□□□ -1.73
HIF1A-203ENST00000394997 USH2AO75445 5202 aa4.23□□□□□ -1.73
HIF1A-203ENST00000394997 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
HIF1A-203ENST00000394997 LCE3AQ5TA76 89 aa4.17□□□□□ -1.74
HIF1A-203ENST00000394997 LCE2BO14633 110 aa4.17□□□□□ -1.74
HIF1A-203ENST00000394997 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
HIF1A-203ENST00000394997 INE1O15225 51 aa4.12□□□□□ -1.75
HIF1A-203ENST00000394997 KMT2DO14686 5537 aa4.11□□□□□ -1.75
HIF1A-203ENST00000394997 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
HIF1A-203ENST00000394997 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
HIF1A-203ENST00000394997 KRTAP12-3P60328 96 aa4.02□□□□□ -1.77
HIF1A-203ENST00000394997 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
HIF1A-203ENST00000394997 KRTAP9-2Q9BYQ4 174 aa3.91□□□□□ -1.78
HIF1A-203ENST00000394997 CRCT1Q9UGL9 99 aa3.85□□□□□ -1.79
HIF1A-203ENST00000394997 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
HIF1A-203ENST00000394997 KRTAP4-8A0A0G2JLE6 195 aa3.83□□□□□ -1.8
HIF1A-203ENST00000394997 KRTAP4-8Q9BYQ9 185 aa3.83□□□□□ -1.8
HIF1A-203ENST00000394997 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
HIF1A-203ENST00000394997 DSTQ03001 7570 aaKnown RBP3.8□□□□□ -1.8
HIF1A-203ENST00000394997 KRTAP19-5Q3LI72 72 aa3.79□□□□□ -1.8
HIF1A-203ENST00000394997 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
HIF1A-203ENST00000394997 KRTAP9-6A8MVA2 160 aa3.76□□□□□ -1.81
HIF1A-203ENST00000394997 KRTAP19-6Q3LI70 58 aa3.75□□□□□ -1.81
HIF1A-203ENST00000394997 SPRR2FQ96RM1 72 aa3.75□□□□□ -1.81
HIF1A-203ENST00000394997 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
HIF1A-203ENST00000394997 FCGBPQ9Y6R7 5405 aaPredicted RBP3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms