RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 H0YAA0 97 aa7.94□□□□□ -1.14
CPSF7-202ENST00000394888 RPL37P61927 97 aaKnown RBP7.93□□□□□ -1.14
CPSF7-202ENST00000394888 COX6B2Q6YFQ2 88 aa7.93□□□□□ -1.14
CPSF7-202ENST00000394888 MIR22HGQ0VDD5 57 aa7.92□□□□□ -1.14
CPSF7-202ENST00000394888 UQCR11O14957 56 aa7.91□□□□□ -1.14
CPSF7-202ENST00000394888 MUC17Q685J3 4493 aa7.89□□□□□ -1.15
CPSF7-202ENST00000394888 ADM2Q7Z4H4 148 aa7.86□□□□□ -1.15
CPSF7-202ENST00000394888 KRTAP4-5Q9BYR2 181 aa7.83□□□□□ -1.16
CPSF7-202ENST00000394888 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-202ENST00000394888 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
CPSF7-202ENST00000394888 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
CPSF7-202ENST00000394888 RBM12B-AS1Q9P1G2 102 aa7.78□□□□□ -1.16
CPSF7-202ENST00000394888 H1FX-AS1Q4G0G2 97 aa7.77□□□□□ -1.17
CPSF7-202ENST00000394888 PRAC1Q96KF2 57 aa7.75□□□□□ -1.17
CPSF7-202ENST00000394888 KRTAP13-4Q3LI77 160 aa7.74□□□□□ -1.17
CPSF7-202ENST00000394888 SEC61GP60059 68 aa7.73□□□□□ -1.17
CPSF7-202ENST00000394888 A0A1B0GU33 70 aa7.72□□□□□ -1.17
CPSF7-202ENST00000394888 TPRXLQ17RH7 258 aa7.67□□□□□ -1.18
CPSF7-202ENST00000394888 HERC2O95714 4834 aa7.64□□□□□ -1.19
CPSF7-202ENST00000394888 S4R3F8 94 aa7.6□□□□□ -1.19
CPSF7-202ENST00000394888 P0C880 135 aa7.59□□□□□ -1.19
CPSF7-202ENST00000394888 KRTAP4-1Q9BYQ7 146 aa7.55□□□□□ -1.2
CPSF7-202ENST00000394888 MUC2Q02817 5179 aa7.54□□□□□ -1.2
CPSF7-202ENST00000394888 BIRC6Q9NR09 4857 aa7.54□□□□□ -1.2
CPSF7-202ENST00000394888 KRTAP19-2Q3LHN2 52 aa7.54□□□□□ -1.2
CPSF7-202ENST00000394888 FLGP20930 4061 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-202ENST00000394888 CSAG1Q6PB30 78 aa7.5□□□□□ -1.21
CPSF7-202ENST00000394888 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
CPSF7-202ENST00000394888 HERC1Q15751 4861 aa7.41□□□□□ -1.22
CPSF7-202ENST00000394888 KRTAP12-2P59991 146 aa7.4□□□□□ -1.23
CPSF7-202ENST00000394888 HMCN2Q8NDA2 5059 aa7.37□□□□□ -1.23
CPSF7-202ENST00000394888 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
CPSF7-202ENST00000394888 KRTAP25-1Q3LHN0 102 aa7.34□□□□□ -1.23
CPSF7-202ENST00000394888 LINC01554Q52M75 96 aa7.34□□□□□ -1.23
CPSF7-202ENST00000394888 A0A0D9SG42 100 aa7.33□□□□□ -1.24
CPSF7-202ENST00000394888 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
CPSF7-202ENST00000394888 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
CPSF7-202ENST00000394888 ROMO1P60602 79 aa7.24□□□□□ -1.25
CPSF7-202ENST00000394888 SEC61BP60468 96 aaKnown RBP7.19□□□□□ -1.26
CPSF7-202ENST00000394888 M0QZ58 72 aa7.16□□□□□ -1.26
CPSF7-202ENST00000394888 FAT4Q6V0I7 4981 aa7.15□□□□□ -1.26
CPSF7-202ENST00000394888 K7ERS5 55 aa7.14□□□□□ -1.27
CPSF7-202ENST00000394888 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
CPSF7-202ENST00000394888 J3QL48 77 aa7.08□□□□□ -1.28
CPSF7-202ENST00000394888 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
CPSF7-202ENST00000394888 SPINT4Q6UDR6 99 aa7.03□□□□□ -1.28
CPSF7-202ENST00000394888 UBR4Q5T4S7 5183 aa7.02□□□□□ -1.29
CPSF7-202ENST00000394888 RNF213Q63HN8 5207 aa6.99□□□□□ -1.29
CPSF7-202ENST00000394888 R4GN34 69 aa6.95□□□□□ -1.3
CPSF7-202ENST00000394888 KRTAP15-1Q3LI76 137 aa6.8□□□□□ -1.32
CPSF7-202ENST00000394888 MT1HP80294 61 aa6.73□□□□□ -1.33
CPSF7-202ENST00000394888 KRTAP19-1Q8IUB9 90 aa6.73□□□□□ -1.33
CPSF7-202ENST00000394888 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
CPSF7-202ENST00000394888 KRTAP9-8Q9BYQ0 159 aa6.64□□□□□ -1.35
CPSF7-202ENST00000394888 MT1FP04733 61 aa6.61□□□□□ -1.35
CPSF7-202ENST00000394888 MT2AP02795 61 aa6.59□□□□□ -1.35
CPSF7-202ENST00000394888 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
CPSF7-202ENST00000394888 H3BS24 57 aa6.43□□□□□ -1.38
CPSF7-202ENST00000394888 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
CPSF7-202ENST00000394888 MT1BP07438 61 aa6.4□□□□□ -1.38
CPSF7-202ENST00000394888 PP632Q6XCG6 107 aa6.39□□□□□ -1.39
CPSF7-202ENST00000394888 KRTAP23-1A1A580 65 aa6.37□□□□□ -1.39
CPSF7-202ENST00000394888 PLAC4Q8WY50 150 aa6.37□□□□□ -1.39
CPSF7-202ENST00000394888 KRTAP9-3Q9BYQ3 159 aa6.35□□□□□ -1.39
CPSF7-202ENST00000394888 NDUFAF8A1L188 74 aa6.34□□□□□ -1.39
CPSF7-202ENST00000394888 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
CPSF7-202ENST00000394888 KRTAP10-10P60014 251 aa6.32□□□□□ -1.4
CPSF7-202ENST00000394888 M0R2T5 61 aa6.32□□□□□ -1.4
CPSF7-202ENST00000394888 TNP1P09430 55 aa6.31□□□□□ -1.4
CPSF7-202ENST00000394888 MT1XP80297 61 aa6.31□□□□□ -1.4
CPSF7-202ENST00000394888 SPRR5A0A1B0GTR4 108 aa6.25□□□□□ -1.41
CPSF7-202ENST00000394888 LCE3AQ5TA76 89 aa6.23□□□□□ -1.41
CPSF7-202ENST00000394888 USH2AO75445 5202 aa6.19□□□□□ -1.42
CPSF7-202ENST00000394888 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
CPSF7-202ENST00000394888 LCE2BO14633 110 aa6.14□□□□□ -1.43
CPSF7-202ENST00000394888 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
CPSF7-202ENST00000394888 KRTAP8-1Q8IUC2 63 aa6.09□□□□□ -1.43
CPSF7-202ENST00000394888 KMT2DO14686 5537 aa6.03□□□□□ -1.44
CPSF7-202ENST00000394888 KRTAP10-12P60413 245 aa5.94□□□□□ -1.46
CPSF7-202ENST00000394888 SSPOA2VEC9 5147 aa5.88□□□□□ -1.47
CPSF7-202ENST00000394888 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
CPSF7-202ENST00000394888 LUZP6Q538Z0 58 aa5.76□□□□□ -1.49
CPSF7-202ENST00000394888 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
CPSF7-202ENST00000394888 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
CPSF7-202ENST00000394888 KRTAP19-5Q3LI72 72 aa5.76□□□□□ -1.49
CPSF7-202ENST00000394888 PRO2289Q9P1D8 64 aa5.71□□□□□ -1.49
CPSF7-202ENST00000394888 KRTAP19-7Q3SYF9 63 aa5.66□□□□□ -1.5
CPSF7-202ENST00000394888 KRTAP9-6A8MVA2 160 aa5.57□□□□□ -1.52
CPSF7-202ENST00000394888 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
CPSF7-202ENST00000394888 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
CPSF7-202ENST00000394888 KRTAP4-7Q9BYR0 210 aa5.48□□□□□ -1.53
CPSF7-202ENST00000394888 MT1EP04732 61 aa5.44□□□□□ -1.54
CPSF7-202ENST00000394888 FSIP2Q5CZC0 6907 aa5.43□□□□□ -1.54
CPSF7-202ENST00000394888 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-202ENST00000394888 MT1LQ93083 61 aa5.41□□□□□ -1.54
CPSF7-202ENST00000394888 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
CPSF7-202ENST00000394888 LCE2DQ5TA82 110 aaPredicted RBP5.3□□□□□ -1.56
CPSF7-202ENST00000394888 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
CPSF7-202ENST00000394888 KRTAP2-3P0C7H8 128 aa5.24□□□□□ -1.57
CPSF7-202ENST00000394888 KRTAP2-4Q9BYR9 128 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms