RNA–Protein interactions for RNA: ENST00000394767.2

CXXC4-201, Transcript of CXXC finger protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CXXC4, Length 5,565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-201ENST00000394767 PRAC1Q96KF2 57 aa9.51□□□□□ -0.89
CXXC4-201ENST00000394767 P0C880 135 aa9.5□□□□□ -0.89
CXXC4-201ENST00000394767 SACSQ9NZJ4 4579 aa9.49□□□□□ -0.89
CXXC4-201ENST00000394767 RYR3Q15413 4870 aa9.49□□□□□ -0.89
CXXC4-201ENST00000394767 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
CXXC4-201ENST00000394767 LYSTQ99698 3801 aa9.41□□□□□ -0.9
CXXC4-201ENST00000394767 RYR2Q92736 4967 aa9.4□□□□□ -0.91
CXXC4-201ENST00000394767 DNAH7Q8WXX0 4024 aa9.35□□□□□ -0.91
CXXC4-201ENST00000394767 KRTAP17-1Q9BYP8 105 aa9.29□□□□□ -0.92
CXXC4-201ENST00000394767 TNP1P09430 55 aa9.28□□□□□ -0.92
CXXC4-201ENST00000394767 HYDINQ4G0P3 5121 aa9.27□□□□□ -0.92
CXXC4-201ENST00000394767 DNAH6Q9C0G6 4158 aa9.27□□□□□ -0.93
CXXC4-201ENST00000394767 H0YAA0 97 aa9.26□□□□□ -0.93
CXXC4-201ENST00000394767 DNAH8Q96JB1 4490 aa9.21□□□□□ -0.93
CXXC4-201ENST00000394767 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.93
CXXC4-201ENST00000394767 H3BS24 57 aa9.21□□□□□ -0.93
CXXC4-201ENST00000394767 VPS13BQ7Z7G8 4022 aa9.19□□□□□ -0.94
CXXC4-201ENST00000394767 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
CXXC4-201ENST00000394767 KMT2CQ8NEZ4 4911 aaKnown RBP9.17□□□□□ -0.94
CXXC4-201ENST00000394767 BIRC6Q9NR09 4857 aa9.11□□□□□ -0.95
CXXC4-201ENST00000394767 HERC2O95714 4834 aa9.04□□□□□ -0.96
CXXC4-201ENST00000394767 HECTD4Q9Y4D8 3996 aa9.04□□□□□ -0.96
CXXC4-201ENST00000394767 A6NN06 94 aa9.03□□□□□ -0.96
CXXC4-201ENST00000394767 PKHD1P08F94 4074 aa9.03□□□□□ -0.96
CXXC4-201ENST00000394767 LRP1Q07954 4544 aaKnown RBP9.02□□□□□ -0.97
CXXC4-201ENST00000394767 A0A0A0MQY5 61 aa9□□□□□ -0.97
CXXC4-201ENST00000394767 KRTAP4-1Q9BYQ7 146 aa8.99□□□□□ -0.97
CXXC4-201ENST00000394767 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
CXXC4-201ENST00000394767 HSPG2P98160 4391 aa8.94□□□□□ -0.98
CXXC4-201ENST00000394767 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
CXXC4-201ENST00000394767 MYCBP2O75592 4640 aa8.93□□□□□ -0.98
CXXC4-201ENST00000394767 KRTAP25-1Q3LHN0 102 aa8.89□□□□□ -0.99
CXXC4-201ENST00000394767 KRTAP12-2P59991 146 aa8.88□□□□□ -0.99
CXXC4-201ENST00000394767 FRAS1Q86XX4 4008 aa8.87□□□□□ -0.99
CXXC4-201ENST00000394767 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
CXXC4-201ENST00000394767 KRTAP12-1P59990 96 aa8.81□□□□□ -1
CXXC4-201ENST00000394767 KRTAP13-4Q3LI77 160 aa8.81□□□□□ -1
CXXC4-201ENST00000394767 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
CXXC4-201ENST00000394767 PKD1P98161 4303 aa8.81□□□□□ -1
CXXC4-201ENST00000394767 PP632Q6XCG6 107 aa8.78□□□□□ -1
CXXC4-201ENST00000394767 EPPK1P58107 5090 aaKnown RBP8.77□□□□□ -1.01
CXXC4-201ENST00000394767 KRTAP3-2Q9BYR7 98 aa8.76□□□□□ -1.01
CXXC4-201ENST00000394767 MT1HP80294 61 aa8.7□□□□□ -1.02
CXXC4-201ENST00000394767 NDUFAF8A1L188 74 aa8.6□□□□□ -1.03
CXXC4-201ENST00000394767 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
CXXC4-201ENST00000394767 LRP2P98164 4655 aa8.52□□□□□ -1.05
CXXC4-201ENST00000394767 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
CXXC4-201ENST00000394767 MT2AP02795 61 aa8.43□□□□□ -1.06
CXXC4-201ENST00000394767 HERC1Q15751 4861 aa8.42□□□□□ -1.06
CXXC4-201ENST00000394767 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
CXXC4-201ENST00000394767 MT1FP04733 61 aa8.31□□□□□ -1.08
CXXC4-201ENST00000394767 LPAP08519 4548 aa8.28□□□□□ -1.08
CXXC4-201ENST00000394767 PKHD1L1Q86WI1 4243 aa8.24□□□□□ -1.09
CXXC4-201ENST00000394767 TNXBP22105 4242 aa8.24□□□□□ -1.09
CXXC4-201ENST00000394767 KRTAP10-12P60413 245 aa8.22□□□□□ -1.09
CXXC4-201ENST00000394767 SPRR2GQ9BYE4 73 aa8.15□□□□□ -1.1
CXXC4-201ENST00000394767 LCE2CQ5TA81 110 aa8.1□□□□□ -1.11
CXXC4-201ENST00000394767 KRTAP15-1Q3LI76 137 aa8.02□□□□□ -1.13
CXXC4-201ENST00000394767 KRTAP9-8Q9BYQ0 159 aa7.93□□□□□ -1.14
CXXC4-201ENST00000394767 KRTAP8-1Q8IUC2 63 aa7.91□□□□□ -1.14
CXXC4-201ENST00000394767 LCE3AQ5TA76 89 aa7.9□□□□□ -1.14
CXXC4-201ENST00000394767 KRTAP19-2Q3LHN2 52 aa7.89□□□□□ -1.15
CXXC4-201ENST00000394767 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
CXXC4-201ENST00000394767 KRTAP12-3P60328 96 aa7.87□□□□□ -1.15
CXXC4-201ENST00000394767 HMCN2Q8NDA2 5059 aa7.78□□□□□ -1.16
CXXC4-201ENST00000394767 RNF213Q63HN8 5207 aa7.78□□□□□ -1.16
CXXC4-201ENST00000394767 KRTAP19-8Q3LI54 63 aa7.76□□□□□ -1.17
CXXC4-201ENST00000394767 UBR4Q5T4S7 5183 aa7.73□□□□□ -1.17
CXXC4-201ENST00000394767 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
CXXC4-201ENST00000394767 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
CXXC4-201ENST00000394767 KRTAP23-1A1A580 65 aa7.7□□□□□ -1.18
CXXC4-201ENST00000394767 CRCT1Q9UGL9 99 aa7.65□□□□□ -1.18
CXXC4-201ENST00000394767 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
CXXC4-201ENST00000394767 FLGP20930 4061 aaPredicted RBP7.63□□□□□ -1.19
CXXC4-201ENST00000394767 MT1BP07438 61 aa7.62□□□□□ -1.19
CXXC4-201ENST00000394767 SPRR2FQ96RM1 72 aa7.56□□□□□ -1.2
CXXC4-201ENST00000394767 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
CXXC4-201ENST00000394767 KRTAP10-5P60370 271 aa7.54□□□□□ -1.2
CXXC4-201ENST00000394767 LCE2BO14633 110 aa7.49□□□□□ -1.21
CXXC4-201ENST00000394767 MUC2Q02817 5179 aa7.48□□□□□ -1.21
CXXC4-201ENST00000394767 MT1XP80297 61 aa7.48□□□□□ -1.21
CXXC4-201ENST00000394767 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
CXXC4-201ENST00000394767 KRTAP10-7P60409 375 aaPredicted RBP7.44□□□□□ -1.22
CXXC4-201ENST00000394767 KRTAP9-2Q9BYQ4 174 aa7.4□□□□□ -1.22
CXXC4-201ENST00000394767 KRTAP19-5Q3LI72 72 aa7.38□□□□□ -1.23
CXXC4-201ENST00000394767 LCE2DQ5TA82 110 aaPredicted RBP7.21□□□□□ -1.26
CXXC4-201ENST00000394767 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
CXXC4-201ENST00000394767 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
CXXC4-201ENST00000394767 SPRR2EP22531 72 aa7.15□□□□□ -1.27
CXXC4-201ENST00000394767 SPRR2BP35325 72 aa7.15□□□□□ -1.27
CXXC4-201ENST00000394767 SPRR2AP35326 72 aa7.15□□□□□ -1.27
CXXC4-201ENST00000394767 KRTAP19-6Q3LI70 58 aa7.1□□□□□ -1.27
CXXC4-201ENST00000394767 KRTAP9-6A0A140TA67 174 aa6.99□□□□□ -1.29
CXXC4-201ENST00000394767 LCE3CQ5T5A8 94 aa6.98□□□□□ -1.29
CXXC4-201ENST00000394767 SPRR2DP22532 72 aa6.9□□□□□ -1.3
CXXC4-201ENST00000394767 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
CXXC4-201ENST00000394767 MT1GP13640 62 aa6.81□□□□□ -1.32
CXXC4-201ENST00000394767 KRTAP19-3Q7Z4W3 81 aa6.7□□□□□ -1.34
CXXC4-201ENST00000394767 MT1EP04732 61 aa6.68□□□□□ -1.34
CXXC4-201ENST00000394767 MT1LQ93083 61 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms