RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 TNP1P09430 55 aa4.57□□□□□ -1.68
CDH11-202ENST00000394156 DNAH2Q9P225 4427 aa4.57□□□□□ -1.68
CDH11-202ENST00000394156 DNAH11Q96DT5 4516 aa4.56□□□□□ -1.68
CDH11-202ENST00000394156 HECTD4Q9Y4D8 3996 aa4.54□□□□□ -1.68
CDH11-202ENST00000394156 KRTAP12-2P59991 146 aa4.53□□□□□ -1.68
CDH11-202ENST00000394156 DNAH8Q96JB1 4490 aa4.49□□□□□ -1.69
CDH11-202ENST00000394156 KRTAP3-1Q9BYR8 98 aa4.49□□□□□ -1.69
CDH11-202ENST00000394156 DNAH17Q9UFH2 4485 aa4.47□□□□□ -1.69
CDH11-202ENST00000394156 DYNC2H1Q8NCM8 4307 aaKnown RBP4.42□□□□□ -1.7
CDH11-202ENST00000394156 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
CDH11-202ENST00000394156 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
CDH11-202ENST00000394156 PKHD1P08F94 4074 aa4.38□□□□□ -1.71
CDH11-202ENST00000394156 MT1HL1P0DM35 61 aa4.36□□□□□ -1.71
CDH11-202ENST00000394156 LRP1BQ9NZR2 4599 aa4.36□□□□□ -1.71
CDH11-202ENST00000394156 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
CDH11-202ENST00000394156 FAT1Q14517 4588 aa4.33□□□□□ -1.72
CDH11-202ENST00000394156 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
CDH11-202ENST00000394156 DNHD1Q96M86 4753 aa4.31□□□□□ -1.72
CDH11-202ENST00000394156 PP632Q6XCG6 107 aa4.3□□□□□ -1.72
CDH11-202ENST00000394156 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
CDH11-202ENST00000394156 PRO2289Q9P1D8 64 aa4.26□□□□□ -1.73
CDH11-202ENST00000394156 KRTAP10-6P60371 365 aaPredicted RBP4.24□□□□□ -1.73
CDH11-202ENST00000394156 KRTAP3-3Q9BYR6 98 aa4.21□□□□□ -1.74
CDH11-202ENST00000394156 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
CDH11-202ENST00000394156 LPAP08519 4548 aa4.21□□□□□ -1.74
CDH11-202ENST00000394156 FAT3Q8TDW7 4589 aa4.2□□□□□ -1.74
CDH11-202ENST00000394156 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
CDH11-202ENST00000394156 SACSQ9NZJ4 4579 aa4.19□□□□□ -1.74
CDH11-202ENST00000394156 HYDINQ4G0P3 5121 aa4.16□□□□□ -1.74
CDH11-202ENST00000394156 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
CDH11-202ENST00000394156 LRP1Q07954 4544 aaKnown RBP4.13□□□□□ -1.75
CDH11-202ENST00000394156 MYCBP2O75592 4640 aa4.12□□□□□ -1.75
CDH11-202ENST00000394156 KRTAP3-2Q9BYR7 98 aa4.11□□□□□ -1.75
CDH11-202ENST00000394156 HSPG2P98160 4391 aa4.11□□□□□ -1.75
CDH11-202ENST00000394156 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
CDH11-202ENST00000394156 PKD1P98161 4303 aa4.09□□□□□ -1.75
CDH11-202ENST00000394156 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.76
CDH11-202ENST00000394156 KRTAP17-1Q9BYP8 105 aa4.07□□□□□ -1.76
CDH11-202ENST00000394156 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
CDH11-202ENST00000394156 PKHD1L1Q86WI1 4243 aa4.04□□□□□ -1.76
CDH11-202ENST00000394156 TNXBP22105 4242 aa3.99□□□□□ -1.77
CDH11-202ENST00000394156 LCE3AQ5TA76 89 aa3.96□□□□□ -1.78
CDH11-202ENST00000394156 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
CDH11-202ENST00000394156 RYR1P21817 5038 aa3.94□□□□□ -1.78
CDH11-202ENST00000394156 KRTAP23-1A1A580 65 aa3.88□□□□□ -1.79
CDH11-202ENST00000394156 MT1HP80294 61 aa3.87□□□□□ -1.79
CDH11-202ENST00000394156 RYR3Q15413 4870 aa3.81□□□□□ -1.8
CDH11-202ENST00000394156 INE1O15225 51 aa3.81□□□□□ -1.8
CDH11-202ENST00000394156 LRP2P98164 4655 aa3.8□□□□□ -1.8
CDH11-202ENST00000394156 KRTAP12-3P60328 96 aa3.8□□□□□ -1.8
CDH11-202ENST00000394156 KMT2CQ8NEZ4 4911 aaKnown RBP3.74□□□□□ -1.81
CDH11-202ENST00000394156 MT1FP04733 61 aa3.74□□□□□ -1.81
CDH11-202ENST00000394156 MT2AP02795 61 aa3.72□□□□□ -1.81
CDH11-202ENST00000394156 KRTAP8-1Q8IUC2 63 aa3.72□□□□□ -1.81
CDH11-202ENST00000394156 KIAA1109Q2LD37 5005 aa3.72□□□□□ -1.81
CDH11-202ENST00000394156 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
CDH11-202ENST00000394156 KRTAP10-5P60370 271 aa3.64□□□□□ -1.83
CDH11-202ENST00000394156 FLGP20930 4061 aaPredicted RBP3.62□□□□□ -1.83
CDH11-202ENST00000394156 KRTAP19-5Q3LI72 72 aa3.59□□□□□ -1.83
CDH11-202ENST00000394156 RYR2Q92736 4967 aa3.58□□□□□ -1.84
CDH11-202ENST00000394156 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
CDH11-202ENST00000394156 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
CDH11-202ENST00000394156 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
CDH11-202ENST00000394156 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
CDH11-202ENST00000394156 HERC2O95714 4834 aa3.47□□□□□ -1.85
CDH11-202ENST00000394156 EPPK1P58107 5090 aaKnown RBP3.46□□□□□ -1.86
CDH11-202ENST00000394156 MUC17Q685J3 4493 aa3.44□□□□□ -1.86
CDH11-202ENST00000394156 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
CDH11-202ENST00000394156 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
CDH11-202ENST00000394156 LCE2CQ5TA81 110 aa3.39□□□□□ -1.87
CDH11-202ENST00000394156 MT1XP80297 61 aa3.38□□□□□ -1.87
CDH11-202ENST00000394156 MUC2Q02817 5179 aa3.38□□□□□ -1.87
CDH11-202ENST00000394156 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
CDH11-202ENST00000394156 SPRR2EP22531 72 aa3.36□□□□□ -1.87
CDH11-202ENST00000394156 SPRR2BP35325 72 aa3.36□□□□□ -1.87
CDH11-202ENST00000394156 SPRR2AP35326 72 aa3.36□□□□□ -1.87
CDH11-202ENST00000394156 MT1GP13640 62 aa3.34□□□□□ -1.87
CDH11-202ENST00000394156 MT1BP07438 61 aa3.34□□□□□ -1.88
CDH11-202ENST00000394156 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
CDH11-202ENST00000394156 KRTAP4-7Q9BYR0 210 aa3.33□□□□□ -1.88
CDH11-202ENST00000394156 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
CDH11-202ENST00000394156 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
CDH11-202ENST00000394156 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.89
CDH11-202ENST00000394156 LCE2BO14633 110 aa3.26□□□□□ -1.89
CDH11-202ENST00000394156 HERC1Q15751 4861 aa3.23□□□□□ -1.89
CDH11-202ENST00000394156 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
CDH11-202ENST00000394156 KRTAP19-2Q3LHN2 52 aa3.23□□□□□ -1.89
CDH11-202ENST00000394156 PCLOQ9Y6V0 5065 aa3.21□□□□□ -1.9
CDH11-202ENST00000394156 SPRR2DP22532 72 aa3.21□□□□□ -1.9
CDH11-202ENST00000394156 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
CDH11-202ENST00000394156 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
CDH11-202ENST00000394156 HMCN2Q8NDA2 5059 aa3.17□□□□□ -1.9
CDH11-202ENST00000394156 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
CDH11-202ENST00000394156 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
CDH11-202ENST00000394156 FAT4Q6V0I7 4981 aa3.14□□□□□ -1.91
CDH11-202ENST00000394156 SPRR5A0A1B0GTR4 108 aa3.14□□□□□ -1.91
CDH11-202ENST00000394156 UBR4Q5T4S7 5183 aa3.12□□□□□ -1.91
CDH11-202ENST00000394156 RNF213Q63HN8 5207 aa3.11□□□□□ -1.91
CDH11-202ENST00000394156 KRTAP9-2Q9BYQ4 174 aa3.08□□□□□ -1.92
CDH11-202ENST00000394156 KRTAP19-4Q3LI73 84 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms