RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 KRTAP4-5Q9BYR2 181 aa12.61□□□□□ -0.39
RARA-204ENST00000394089 C9orf92A6NGG3 77 aa12.61□□□□□ -0.39
RARA-204ENST00000394089 MYCBP2O75592 4640 aa12.59□□□□□ -0.39
RARA-204ENST00000394089 C20orf166-AS1Q96NR2 134 aa12.56□□□□□ -0.4
RARA-204ENST00000394089 A8MUU9 505 aa12.55□□□□□ -0.4
RARA-204ENST00000394089 DMBT1Q9UGM3 2413 aaPredicted RBP12.47□□□□□ -0.41
RARA-204ENST00000394089 KRTAP25-1Q3LHN0 102 aa12.46□□□□□ -0.41
RARA-204ENST00000394089 HERC2O95714 4834 aa12.44□□□□□ -0.42
RARA-204ENST00000394089 H0YAA0 97 aa12.4□□□□□ -0.42
RARA-204ENST00000394089 ABCA13Q86UQ4 5058 aa12.36□□□□□ -0.43
RARA-204ENST00000394089 ROMO1P60602 79 aa12.33□□□□□ -0.44
RARA-204ENST00000394089 XP32Q5T750 250 aa12.29□□□□□ -0.44
RARA-204ENST00000394089 RPL37P61927 97 aaKnown RBP12.27□□□□□ -0.45
RARA-204ENST00000394089 J3QL48 77 aa12.23□□□□□ -0.45
RARA-204ENST00000394089 TPRXLQ17RH7 258 aa12.22□□□□□ -0.45
RARA-204ENST00000394089 A0A1B0GU33 70 aa12.21□□□□□ -0.45
RARA-204ENST00000394089 H1FX-AS1Q4G0G2 97 aa12.19□□□□□ -0.46
RARA-204ENST00000394089 PCLOQ9Y6V0 5065 aa12.16□□□□□ -0.46
RARA-204ENST00000394089 KRTAP3-1Q9BYR8 98 aa12.03□□□□□ -0.48
RARA-204ENST00000394089 K7ERS5 55 aa12.02□□□□□ -0.49
RARA-204ENST00000394089 P0C880 135 aa11.94□□□□□ -0.5
RARA-204ENST00000394089 LPAP08519 4548 aa11.92□□□□□ -0.5
RARA-204ENST00000394089 LRP2P98164 4655 aa11.9□□□□□ -0.5
RARA-204ENST00000394089 COX6B2Q6YFQ2 88 aa11.89□□□□□ -0.51
RARA-204ENST00000394089 SEC61BP60468 96 aaKnown RBP11.79□□□□□ -0.52
RARA-204ENST00000394089 CRIPTQ9P021 101 aa11.76□□□□□ -0.53
RARA-204ENST00000394089 MUC17Q685J3 4493 aa11.65□□□□□ -0.55
RARA-204ENST00000394089 KRTAP10-6P60371 365 aaPredicted RBP11.63□□□□□ -0.55
RARA-204ENST00000394089 HERC1Q15751 4861 aa11.6□□□□□ -0.55
RARA-204ENST00000394089 HMCN2Q8NDA2 5059 aa11.57□□□□□ -0.56
RARA-204ENST00000394089 SPINT4Q6UDR6 99 aa11.56□□□□□ -0.56
RARA-204ENST00000394089 KRTAP15-1Q3LI76 137 aa11.55□□□□□ -0.56
RARA-204ENST00000394089 KRTAP13-4Q3LI77 160 aa11.53□□□□□ -0.56
RARA-204ENST00000394089 KRTAP4-1Q9BYQ7 146 aa11.52□□□□□ -0.56
RARA-204ENST00000394089 KRTAP3-2Q9BYR7 98 aa11.5□□□□□ -0.57
RARA-204ENST00000394089 KRTAP3-3Q9BYR6 98 aa11.49□□□□□ -0.57
RARA-204ENST00000394089 S4R3F8 94 aa11.49□□□□□ -0.57
RARA-204ENST00000394089 A0A0D9SG42 100 aa11.36□□□□□ -0.59
RARA-204ENST00000394089 C10orf95Q9H7T3 257 aa11.35□□□□□ -0.59
RARA-204ENST00000394089 NDUFAF8A1L188 74 aa11.35□□□□□ -0.59
RARA-204ENST00000394089 KRTAP19-2Q3LHN2 52 aa11.27□□□□□ -0.61
RARA-204ENST00000394089 KRTAP12-2P59991 146 aa11.21□□□□□ -0.61
RARA-204ENST00000394089 KRTAP12-1P59990 96 aa11.15□□□□□ -0.62
RARA-204ENST00000394089 MUC2Q02817 5179 aa11.08□□□□□ -0.64
RARA-204ENST00000394089 M0QZ58 72 aa10.98□□□□□ -0.65
RARA-204ENST00000394089 FLGP20930 4061 aaPredicted RBP10.96□□□□□ -0.65
RARA-204ENST00000394089 RNF213Q63HN8 5207 aa10.95□□□□□ -0.66
RARA-204ENST00000394089 UBR4Q5T4S7 5183 aa10.94□□□□□ -0.66
RARA-204ENST00000394089 LCE2CQ5TA81 110 aa10.92□□□□□ -0.66
RARA-204ENST00000394089 MT1HP80294 61 aa10.68□□□□□ -0.7
RARA-204ENST00000394089 FAT4Q6V0I7 4981 aa10.65□□□□□ -0.7
RARA-204ENST00000394089 PLAC4Q8WY50 150 aa10.65□□□□□ -0.71
RARA-204ENST00000394089 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
RARA-204ENST00000394089 R4GN34 69 aa10.59□□□□□ -0.71
RARA-204ENST00000394089 LORP23490 312 aaPredicted RBP10.58□□□□□ -0.72
RARA-204ENST00000394089 M0R2T5 61 aa10.57□□□□□ -0.72
RARA-204ENST00000394089 LUZP6Q538Z0 58 aa10.51□□□□□ -0.73
RARA-204ENST00000394089 PP632Q6XCG6 107 aa10.4□□□□□ -0.74
RARA-204ENST00000394089 KRTAP9-8Q9BYQ0 159 aa10.32□□□□□ -0.76
RARA-204ENST00000394089 MT2AP02795 61 aa10.31□□□□□ -0.76
RARA-204ENST00000394089 MT1FP04733 61 aa10.25□□□□□ -0.77
RARA-204ENST00000394089 KRTAP10-10P60014 251 aa10.22□□□□□ -0.77
RARA-204ENST00000394089 SPRR2GQ9BYE4 73 aa10.2□□□□□ -0.78
RARA-204ENST00000394089 KRTAP19-1Q8IUB9 90 aa10.14□□□□□ -0.79
RARA-204ENST00000394089 LCE2AQ5TA79 106 aaPredicted RBP10.14□□□□□ -0.79
RARA-204ENST00000394089 SPRR5A0A1B0GTR4 108 aa10.02□□□□□ -0.81
RARA-204ENST00000394089 KRTAP23-1A1A580 65 aa10.02□□□□□ -0.81
RARA-204ENST00000394089 KRTAP9-3Q9BYQ3 159 aa9.95□□□□□ -0.82
RARA-204ENST00000394089 CAMK2N1Q7Z7J9 78 aa9.94□□□□□ -0.82
RARA-204ENST00000394089 KRTAP19-8Q3LI54 63 aa9.91□□□□□ -0.82
RARA-204ENST00000394089 MT1BP07438 61 aa9.75□□□□□ -0.85
RARA-204ENST00000394089 TNP1P09430 55 aa9.75□□□□□ -0.85
RARA-204ENST00000394089 KRTAP9-2Q9BYQ4 174 aa9.63□□□□□ -0.87
RARA-204ENST00000394089 LCE2BO14633 110 aa9.63□□□□□ -0.87
RARA-204ENST00000394089 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
RARA-204ENST00000394089 MT1XP80297 61 aa9.48□□□□□ -0.89
RARA-204ENST00000394089 KRTAP10-5P60370 271 aa9.47□□□□□ -0.89
RARA-204ENST00000394089 LCE2DQ5TA82 110 aaPredicted RBP9.4□□□□□ -0.9
RARA-204ENST00000394089 INE1O15225 51 aa9.32□□□□□ -0.92
RARA-204ENST00000394089 USH2AO75445 5202 aa9.32□□□□□ -0.92
RARA-204ENST00000394089 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
RARA-204ENST00000394089 FSIP2Q5CZC0 6907 aa9.19□□□□□ -0.94
RARA-204ENST00000394089 CRCT1Q9UGL9 99 aa9.12□□□□□ -0.95
RARA-204ENST00000394089 LCE3AQ5TA76 89 aa9.1□□□□□ -0.95
RARA-204ENST00000394089 KRTAP10-7P60409 375 aaPredicted RBP9.1□□□□□ -0.95
RARA-204ENST00000394089 KRTAP10-12P60413 245 aa9.04□□□□□ -0.96
RARA-204ENST00000394089 KRTAP8-1Q8IUC2 63 aa9.03□□□□□ -0.96
RARA-204ENST00000394089 KRTAP19-6Q3LI70 58 aa9.01□□□□□ -0.97
RARA-204ENST00000394089 SSPOA2VEC9 5147 aa9.01□□□□□ -0.97
RARA-204ENST00000394089 KRTAP12-3P60328 96 aa8.71□□□□□ -1.02
RARA-204ENST00000394089 KRTAP4-8A0A0G2JLE6 195 aa8.68□□□□□ -1.02
RARA-204ENST00000394089 KRTAP4-8Q9BYQ9 185 aa8.68□□□□□ -1.02
RARA-204ENST00000394089 KRTAP19-5Q3LI72 72 aa8.6□□□□□ -1.03
RARA-204ENST00000394089 KMT2DO14686 5537 aa8.58□□□□□ -1.04
RARA-204ENST00000394089 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
RARA-204ENST00000394089 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.48□□□□□ -1.05
RARA-204ENST00000394089 KRTAP19-7Q3SYF9 63 aa8.46□□□□□ -1.06
RARA-204ENST00000394089 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
RARA-204ENST00000394089 MT1EP04732 61 aa8.3□□□□□ -1.08
RARA-204ENST00000394089 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms