RNA–Protein interactions for RNA: ENST00000393648.6

FGFR4-203, Transcript of fibroblast growth factor receptor 4, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene FGFR4, Length 2,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR4-203ENST00000393648 ROMO1P60602 79 aa9.56□□□□□ -0.88
FGFR4-203ENST00000393648 CRIPTQ9P021 101 aa9.54□□□□□ -0.88
FGFR4-203ENST00000393648 A8MUU9 505 aa9.53□□□□□ -0.88
FGFR4-203ENST00000393648 H0YAA0 97 aa9.53□□□□□ -0.88
FGFR4-203ENST00000393648 KRTAP10-8P60410 259 aa9.5□□□□□ -0.89
FGFR4-203ENST00000393648 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
FGFR4-203ENST00000393648 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
FGFR4-203ENST00000393648 MT1HL1P0DM35 61 aa9.36□□□□□ -0.91
FGFR4-203ENST00000393648 A0A1B0GU33 70 aa9.36□□□□□ -0.91
FGFR4-203ENST00000393648 P0C880 135 aa9.35□□□□□ -0.91
FGFR4-203ENST00000393648 C20orf166-AS1Q96NR2 134 aa9.33□□□□□ -0.92
FGFR4-203ENST00000393648 H1FX-AS1Q4G0G2 97 aa9.28□□□□□ -0.92
FGFR4-203ENST00000393648 ABCA13Q86UQ4 5058 aa9.24□□□□□ -0.93
FGFR4-203ENST00000393648 K7ERS5 55 aa9.19□□□□□ -0.94
FGFR4-203ENST00000393648 SPINT4Q6UDR6 99 aa9.16□□□□□ -0.94
FGFR4-203ENST00000393648 XP32Q5T750 250 aa9.15□□□□□ -0.94
FGFR4-203ENST00000393648 HERC2O95714 4834 aa9.13□□□□□ -0.95
FGFR4-203ENST00000393648 KRTAP3-1Q9BYR8 98 aa9.13□□□□□ -0.95
FGFR4-203ENST00000393648 LPAP08519 4548 aa9.12□□□□□ -0.95
FGFR4-203ENST00000393648 LRP2P98164 4655 aa9.11□□□□□ -0.95
FGFR4-203ENST00000393648 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
FGFR4-203ENST00000393648 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
FGFR4-203ENST00000393648 BIRC6Q9NR09 4857 aa9.06□□□□□ -0.96
FGFR4-203ENST00000393648 A0A0A0MQY5 61 aa9.03□□□□□ -0.96
FGFR4-203ENST00000393648 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
FGFR4-203ENST00000393648 TPRXLQ17RH7 258 aa9.03□□□□□ -0.96
FGFR4-203ENST00000393648 A0A0D9SG42 100 aa9.01□□□□□ -0.97
FGFR4-203ENST00000393648 C10orf95Q9H7T3 257 aa9.01□□□□□ -0.97
FGFR4-203ENST00000393648 J3QL48 77 aa8.96□□□□□ -0.97
FGFR4-203ENST00000393648 KRTAP13-4Q3LI77 160 aa8.89□□□□□ -0.99
FGFR4-203ENST00000393648 KRTAP15-1Q3LI76 137 aa8.86□□□□□ -0.99
FGFR4-203ENST00000393648 PCLOQ9Y6V0 5065 aa8.85□□□□□ -0.99
FGFR4-203ENST00000393648 KRTAP10-6P60371 365 aaPredicted RBP8.8□□□□□ -1
FGFR4-203ENST00000393648 HERC1Q15751 4861 aa8.78□□□□□ -1
FGFR4-203ENST00000393648 KRTAP3-3Q9BYR6 98 aa8.68□□□□□ -1.02
FGFR4-203ENST00000393648 KRTAP3-2Q9BYR7 98 aa8.67□□□□□ -1.02
FGFR4-203ENST00000393648 S4R3F8 94 aa8.67□□□□□ -1.02
FGFR4-203ENST00000393648 MUC2Q02817 5179 aa8.67□□□□□ -1.02
FGFR4-203ENST00000393648 KRTAP12-2P59991 146 aa8.66□□□□□ -1.02
FGFR4-203ENST00000393648 SEC61BP60468 96 aaKnown RBP8.62□□□□□ -1.03
FGFR4-203ENST00000393648 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
FGFR4-203ENST00000393648 MUC17Q685J3 4493 aa8.61□□□□□ -1.03
FGFR4-203ENST00000393648 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
FGFR4-203ENST00000393648 KRTAP12-1P59990 96 aa8.49□□□□□ -1.05
FGFR4-203ENST00000393648 KRTAP19-2Q3LHN2 52 aa8.34□□□□□ -1.07
FGFR4-203ENST00000393648 LUZP6Q538Z0 58 aa8.34□□□□□ -1.07
FGFR4-203ENST00000393648 UBR4Q5T4S7 5183 aa8.32□□□□□ -1.08
FGFR4-203ENST00000393648 RNF213Q63HN8 5207 aa8.3□□□□□ -1.08
FGFR4-203ENST00000393648 FAT4Q6V0I7 4981 aa8.28□□□□□ -1.08
FGFR4-203ENST00000393648 PLAC4Q8WY50 150 aa8.23□□□□□ -1.09
FGFR4-203ENST00000393648 M0QZ58 72 aa8.17□□□□□ -1.1
FGFR4-203ENST00000393648 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.11
FGFR4-203ENST00000393648 LORP23490 312 aaPredicted RBP8.1□□□□□ -1.11
FGFR4-203ENST00000393648 LCE2CQ5TA81 110 aa8.06□□□□□ -1.12
FGFR4-203ENST00000393648 R4GN34 69 aa8.02□□□□□ -1.13
FGFR4-203ENST00000393648 M0R2T5 61 aa7.89□□□□□ -1.15
FGFR4-203ENST00000393648 MT1HP80294 61 aa7.87□□□□□ -1.15
FGFR4-203ENST00000393648 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
FGFR4-203ENST00000393648 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
FGFR4-203ENST00000393648 MT1FP04733 61 aa7.63□□□□□ -1.19
FGFR4-203ENST00000393648 MT2AP02795 61 aa7.62□□□□□ -1.19
FGFR4-203ENST00000393648 KRTAP9-8Q9BYQ0 159 aa7.62□□□□□ -1.19
FGFR4-203ENST00000393648 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
FGFR4-203ENST00000393648 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
FGFR4-203ENST00000393648 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
FGFR4-203ENST00000393648 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
FGFR4-203ENST00000393648 TNP1P09430 55 aa7.39□□□□□ -1.23
FGFR4-203ENST00000393648 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
FGFR4-203ENST00000393648 KRTAP9-3Q9BYQ3 159 aa7.31□□□□□ -1.24
FGFR4-203ENST00000393648 KRTAP19-8Q3LI54 63 aa7.26□□□□□ -1.25
FGFR4-203ENST00000393648 MT1BP07438 61 aa7.25□□□□□ -1.25
FGFR4-203ENST00000393648 USH2AO75445 5202 aa7.24□□□□□ -1.25
FGFR4-203ENST00000393648 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
FGFR4-203ENST00000393648 KRTAP23-1A1A580 65 aa7.18□□□□□ -1.26
FGFR4-203ENST00000393648 LCE2BO14633 110 aa7.14□□□□□ -1.27
FGFR4-203ENST00000393648 MT1XP80297 61 aa7.08□□□□□ -1.28
FGFR4-203ENST00000393648 KRTAP10-5P60370 271 aa7.08□□□□□ -1.28
FGFR4-203ENST00000393648 LCE3AQ5TA76 89 aa7□□□□□ -1.29
FGFR4-203ENST00000393648 INE1O15225 51 aa6.99□□□□□ -1.29
FGFR4-203ENST00000393648 FSIP2Q5CZC0 6907 aa6.92□□□□□ -1.3
FGFR4-203ENST00000393648 KRTAP10-7P60409 375 aaPredicted RBP6.88□□□□□ -1.31
FGFR4-203ENST00000393648 KMT2DO14686 5537 aa6.83□□□□□ -1.32
FGFR4-203ENST00000393648 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
FGFR4-203ENST00000393648 SSPOA2VEC9 5147 aa6.76□□□□□ -1.33
FGFR4-203ENST00000393648 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
FGFR4-203ENST00000393648 KRTAP4-8A0A0G2JLE6 195 aa6.62□□□□□ -1.35
FGFR4-203ENST00000393648 KRTAP4-8Q9BYQ9 185 aa6.62□□□□□ -1.35
FGFR4-203ENST00000393648 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
FGFR4-203ENST00000393648 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
FGFR4-203ENST00000393648 KRTAP19-6Q3LI70 58 aa6.48□□□□□ -1.37
FGFR4-203ENST00000393648 LCE2DQ5TA82 110 aaPredicted RBP6.41□□□□□ -1.38
FGFR4-203ENST00000393648 FCGBPQ9Y6R7 5405 aaPredicted RBP6.41□□□□□ -1.38
FGFR4-203ENST00000393648 KRTAP19-7Q3SYF9 63 aa6.32□□□□□ -1.4
FGFR4-203ENST00000393648 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.41
FGFR4-203ENST00000393648 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
FGFR4-203ENST00000393648 MUC12Q9UKN1 5478 aa6.17□□□□□ -1.42
FGFR4-203ENST00000393648 MT1EP04732 61 aa6.15□□□□□ -1.42
FGFR4-203ENST00000393648 KRTAP4-7Q9BYR0 210 aa6.13□□□□□ -1.43
FGFR4-203ENST00000393648 KRTAP9-6A8MVA2 160 aa6.13□□□□□ -1.43
FGFR4-203ENST00000393648 MACF1Q9UPN3 7388 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms