RNA–Protein interactions for RNA: ENST00000393560.5

LAMB1-203, Transcript of laminin subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene LAMB1, Length 2,806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-203ENST00000393560 VPS13BQ7Z7G8 4022 aa5.91□□□□□ -1.46
LAMB1-203ENST00000393560 PKHD1P08F94 4074 aa5.9□□□□□ -1.46
LAMB1-203ENST00000393560 KRTAP3-2Q9BYR7 98 aa5.89□□□□□ -1.47
LAMB1-203ENST00000393560 XP32Q5T750 250 aa5.89□□□□□ -1.47
LAMB1-203ENST00000393560 KRTAP3-1Q9BYR8 98 aa5.87□□□□□ -1.47
LAMB1-203ENST00000393560 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
LAMB1-203ENST00000393560 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
LAMB1-203ENST00000393560 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
LAMB1-203ENST00000393560 KRTAP13-2Q52LG2 175 aa5.84□□□□□ -1.47
LAMB1-203ENST00000393560 KRTAP10-6P60371 365 aaPredicted RBP5.8□□□□□ -1.48
LAMB1-203ENST00000393560 SMR3BP02814 79 aaPredicted RBP5.8□□□□□ -1.48
LAMB1-203ENST00000393560 R4GN34 69 aa5.8□□□□□ -1.48
LAMB1-203ENST00000393560 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
LAMB1-203ENST00000393560 FAT1Q14517 4588 aa5.79□□□□□ -1.48
LAMB1-203ENST00000393560 RYR2Q92736 4967 aa5.77□□□□□ -1.49
LAMB1-203ENST00000393560 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
LAMB1-203ENST00000393560 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
LAMB1-203ENST00000393560 A0A1B0GVY2 172 aa5.7□□□□□ -1.5
LAMB1-203ENST00000393560 KRTAP1-4P0C5Y4 121 aa5.7□□□□□ -1.5
LAMB1-203ENST00000393560 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
LAMB1-203ENST00000393560 APOBP04114 4563 aaKnown RBP5.68□□□□□ -1.5
LAMB1-203ENST00000393560 RYR3Q15413 4870 aa5.68□□□□□ -1.5
LAMB1-203ENST00000393560 KRTAP23-1A1A580 65 aa5.67□□□□□ -1.5
LAMB1-203ENST00000393560 MYCBP2O75592 4640 aa5.67□□□□□ -1.5
LAMB1-203ENST00000393560 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
LAMB1-203ENST00000393560 KRTAP10-4P60372 401 aaPredicted RBP5.58□□□□□ -1.52
LAMB1-203ENST00000393560 KIAA1109Q2LD37 5005 aa5.54□□□□□ -1.52
LAMB1-203ENST00000393560 HSPG2P98160 4391 aa5.53□□□□□ -1.52
LAMB1-203ENST00000393560 KRTAP3-3Q9BYR6 98 aa5.52□□□□□ -1.53
LAMB1-203ENST00000393560 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
LAMB1-203ENST00000393560 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
LAMB1-203ENST00000393560 Q5VSD8 79 aa5.49□□□□□ -1.53
LAMB1-203ENST00000393560 KRTAP17-1Q9BYP8 105 aa5.49□□□□□ -1.53
LAMB1-203ENST00000393560 RYR1P21817 5038 aa5.48□□□□□ -1.53
LAMB1-203ENST00000393560 INE1O15225 51 aa5.47□□□□□ -1.53
LAMB1-203ENST00000393560 LPAP08519 4548 aa5.46□□□□□ -1.54
LAMB1-203ENST00000393560 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
LAMB1-203ENST00000393560 RPS29P62273 56 aaKnown RBP5.4□□□□□ -1.55
LAMB1-203ENST00000393560 TNXBP22105 4242 aa5.38□□□□□ -1.55
LAMB1-203ENST00000393560 SPRR5A0A1B0GTR4 108 aa5.3□□□□□ -1.56
LAMB1-203ENST00000393560 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
LAMB1-203ENST00000393560 M0QZ58 72 aa5.3□□□□□ -1.56
LAMB1-203ENST00000393560 KRTAP4-5Q9BYR2 181 aa5.3□□□□□ -1.56
LAMB1-203ENST00000393560 LRP2P98164 4655 aa5.29□□□□□ -1.56
LAMB1-203ENST00000393560 MT1HL1P0DM35 61 aa5.27□□□□□ -1.57
LAMB1-203ENST00000393560 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
LAMB1-203ENST00000393560 HERC2O95714 4834 aa5.16□□□□□ -1.58
LAMB1-203ENST00000393560 MUC2Q02817 5179 aa5.13□□□□□ -1.59
LAMB1-203ENST00000393560 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
LAMB1-203ENST00000393560 LCE2DQ5TA82 110 aaPredicted RBP5.04□□□□□ -1.6
LAMB1-203ENST00000393560 PCLOQ9Y6V0 5065 aa4.99□□□□□ -1.61
LAMB1-203ENST00000393560 HERC1Q15751 4861 aa4.97□□□□□ -1.61
LAMB1-203ENST00000393560 LORP23490 312 aaPredicted RBP4.97□□□□□ -1.61
LAMB1-203ENST00000393560 KRTAP4-1Q9BYQ7 146 aa4.88□□□□□ -1.63
LAMB1-203ENST00000393560 MUC17Q685J3 4493 aa4.88□□□□□ -1.63
LAMB1-203ENST00000393560 TNP1P09430 55 aa4.83□□□□□ -1.64
LAMB1-203ENST00000393560 FAT4Q6V0I7 4981 aa4.82□□□□□ -1.64
LAMB1-203ENST00000393560 HMCN2Q8NDA2 5059 aa4.81□□□□□ -1.64
LAMB1-203ENST00000393560 RNF213Q63HN8 5207 aa4.72□□□□□ -1.65
LAMB1-203ENST00000393560 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
LAMB1-203ENST00000393560 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
LAMB1-203ENST00000393560 KRTAP10-10P60014 251 aa4.66□□□□□ -1.66
LAMB1-203ENST00000393560 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.67
LAMB1-203ENST00000393560 LCE2CQ5TA81 110 aa4.53□□□□□ -1.68
LAMB1-203ENST00000393560 LCE2AQ5TA79 106 aaPredicted RBP4.5□□□□□ -1.69
LAMB1-203ENST00000393560 M0R2T5 61 aa4.5□□□□□ -1.69
LAMB1-203ENST00000393560 LCE3AQ5TA76 89 aa4.5□□□□□ -1.69
LAMB1-203ENST00000393560 MT1HP80294 61 aa4.43□□□□□ -1.7
LAMB1-203ENST00000393560 KRTAP10-12P60413 245 aa4.38□□□□□ -1.71
LAMB1-203ENST00000393560 USH2AO75445 5202 aa4.34□□□□□ -1.71
LAMB1-203ENST00000393560 KMT2DO14686 5537 aa4.34□□□□□ -1.71
LAMB1-203ENST00000393560 MT1FP04733 61 aa4.31□□□□□ -1.72
LAMB1-203ENST00000393560 MT2AP02795 61 aa4.31□□□□□ -1.72
LAMB1-203ENST00000393560 KRTAP9-8Q9BYQ0 159 aa4.29□□□□□ -1.72
LAMB1-203ENST00000393560 LCE2BO14633 110 aa4.29□□□□□ -1.72
LAMB1-203ENST00000393560 KRTAP19-1Q8IUB9 90 aa4.28□□□□□ -1.72
LAMB1-203ENST00000393560 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
LAMB1-203ENST00000393560 SPRR2GQ9BYE4 73 aa4.24□□□□□ -1.73
LAMB1-203ENST00000393560 KRTAP12-3P60328 96 aa4.2□□□□□ -1.74
LAMB1-203ENST00000393560 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
LAMB1-203ENST00000393560 FSIP2Q5CZC0 6907 aa4.11□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP2-3P0C7H8 128 aa4.1□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP10-5P60370 271 aa4.1□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP2-4Q9BYR9 128 aa4.1□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP2-1Q9BYU5 128 aa4.1□□□□□ -1.75
LAMB1-203ENST00000393560 MT1BP07438 61 aa4.09□□□□□ -1.75
LAMB1-203ENST00000393560 KRTAP19-8Q3LI54 63 aa4.08□□□□□ -1.76
LAMB1-203ENST00000393560 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
LAMB1-203ENST00000393560 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
LAMB1-203ENST00000393560 MT1XP80297 61 aa4□□□□□ -1.77
LAMB1-203ENST00000393560 KRTAP9-6A8MVA2 160 aa4□□□□□ -1.77
LAMB1-203ENST00000393560 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
LAMB1-203ENST00000393560 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
LAMB1-203ENST00000393560 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
LAMB1-203ENST00000393560 LCE1EQ5T753 118 aa3.93□□□□□ -1.78
LAMB1-203ENST00000393560 KRTAP4-8A0A0G2JLE6 195 aa3.9□□□□□ -1.78
LAMB1-203ENST00000393560 KRTAP4-8Q9BYQ9 185 aa3.9□□□□□ -1.78
LAMB1-203ENST00000393560 KRTAP4-7Q9BYR0 210 aa3.88□□□□□ -1.79
LAMB1-203ENST00000393560 KRTAP19-5Q3LI72 72 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms