RNA–Protein interactions for RNA: ENST00000393389.7

ANKRD42-202, Transcript of ankyrin repeat domain 42, humanhuman

TSL 1 (best) BASIC

Gene ANKRD42, Length 4,066 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD42-202ENST00000393389 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
ANKRD42-202ENST00000393389 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.7
ANKRD42-202ENST00000393389 FAT1Q14517 4588 aa4.45□□□□□ -1.7
ANKRD42-202ENST00000393389 HECTD4Q9Y4D8 3996 aa4.44□□□□□ -1.7
ANKRD42-202ENST00000393389 KRTAP10-8P60410 259 aa4.44□□□□□ -1.7
ANKRD42-202ENST00000393389 DNAH5Q8TE73 4624 aa4.44□□□□□ -1.7
ANKRD42-202ENST00000393389 PKHD1P08F94 4074 aa4.42□□□□□ -1.7
ANKRD42-202ENST00000393389 A0A1B0GVY2 172 aa4.41□□□□□ -1.7
ANKRD42-202ENST00000393389 LUZP6Q538Z0 58 aa4.41□□□□□ -1.7
ANKRD42-202ENST00000393389 DYNC2H1Q8NCM8 4307 aaKnown RBP4.41□□□□□ -1.7
ANKRD42-202ENST00000393389 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
ANKRD42-202ENST00000393389 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
ANKRD42-202ENST00000393389 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
ANKRD42-202ENST00000393389 KRTAP12-2P59991 146 aa4.34□□□□□ -1.71
ANKRD42-202ENST00000393389 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
ANKRD42-202ENST00000393389 DYNC1H1Q14204 4646 aaKnown RBP4.34□□□□□ -1.72
ANKRD42-202ENST00000393389 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
ANKRD42-202ENST00000393389 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
ANKRD42-202ENST00000393389 SACSQ9NZJ4 4579 aa4.31□□□□□ -1.72
ANKRD42-202ENST00000393389 TPRXLQ17RH7 258 aa4.3□□□□□ -1.72
ANKRD42-202ENST00000393389 FAT2Q9NYQ8 4349 aa4.28□□□□□ -1.72
ANKRD42-202ENST00000393389 KRTAP10-4P60372 401 aaPredicted RBP4.28□□□□□ -1.72
ANKRD42-202ENST00000393389 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
ANKRD42-202ENST00000393389 LRP1Q07954 4544 aaKnown RBP4.26□□□□□ -1.73
ANKRD42-202ENST00000393389 APOBP04114 4563 aaKnown RBP4.24□□□□□ -1.73
ANKRD42-202ENST00000393389 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
ANKRD42-202ENST00000393389 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
ANKRD42-202ENST00000393389 FAT3Q8TDW7 4589 aa4.23□□□□□ -1.73
ANKRD42-202ENST00000393389 PKD1P98161 4303 aa4.22□□□□□ -1.73
ANKRD42-202ENST00000393389 RYR3Q15413 4870 aa4.22□□□□□ -1.73
ANKRD42-202ENST00000393389 LCE2BO14633 110 aa4.2□□□□□ -1.74
ANKRD42-202ENST00000393389 RYR2Q92736 4967 aa4.19□□□□□ -1.74
ANKRD42-202ENST00000393389 RYR1P21817 5038 aa4.18□□□□□ -1.74
ANKRD42-202ENST00000393389 MT1HL1P0DM35 61 aa4.18□□□□□ -1.74
ANKRD42-202ENST00000393389 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
ANKRD42-202ENST00000393389 PLAC4Q8WY50 150 aa4.16□□□□□ -1.74
ANKRD42-202ENST00000393389 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
ANKRD42-202ENST00000393389 TNP1P09430 55 aa4.11□□□□□ -1.75
ANKRD42-202ENST00000393389 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
ANKRD42-202ENST00000393389 PCLOQ9Y6V0 5065 aa4.08□□□□□ -1.76
ANKRD42-202ENST00000393389 EPPK1P58107 5090 aaKnown RBP4.07□□□□□ -1.76
ANKRD42-202ENST00000393389 LORP23490 312 aaPredicted RBP4.05□□□□□ -1.76
ANKRD42-202ENST00000393389 HSPG2P98160 4391 aa4.04□□□□□ -1.76
ANKRD42-202ENST00000393389 LRP2P98164 4655 aa4.01□□□□□ -1.77
ANKRD42-202ENST00000393389 KRTAP10-10P60014 251 aa4□□□□□ -1.77
ANKRD42-202ENST00000393389 FSIP2Q5CZC0 6907 aa4□□□□□ -1.77
ANKRD42-202ENST00000393389 PP632Q6XCG6 107 aa3.98□□□□□ -1.77
ANKRD42-202ENST00000393389 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
ANKRD42-202ENST00000393389 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
ANKRD42-202ENST00000393389 PKHD1L1Q86WI1 4243 aa3.96□□□□□ -1.78
ANKRD42-202ENST00000393389 LPAP08519 4548 aa3.96□□□□□ -1.78
ANKRD42-202ENST00000393389 HERC2O95714 4834 aa3.94□□□□□ -1.78
ANKRD42-202ENST00000393389 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
ANKRD42-202ENST00000393389 KRTAP4-1Q9BYQ7 146 aa3.92□□□□□ -1.78
ANKRD42-202ENST00000393389 MUC2Q02817 5179 aa3.87□□□□□ -1.79
ANKRD42-202ENST00000393389 TNXBP22105 4242 aa3.87□□□□□ -1.79
ANKRD42-202ENST00000393389 HERC1Q15751 4861 aa3.81□□□□□ -1.8
ANKRD42-202ENST00000393389 RNF213Q63HN8 5207 aa3.76□□□□□ -1.81
ANKRD42-202ENST00000393389 BIRC6Q9NR09 4857 aa3.71□□□□□ -1.82
ANKRD42-202ENST00000393389 FAT4Q6V0I7 4981 aa3.69□□□□□ -1.82
ANKRD42-202ENST00000393389 UBR4Q5T4S7 5183 aa3.69□□□□□ -1.82
ANKRD42-202ENST00000393389 LCE3AQ5TA76 89 aa3.67□□□□□ -1.82
ANKRD42-202ENST00000393389 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
ANKRD42-202ENST00000393389 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
ANKRD42-202ENST00000393389 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
ANKRD42-202ENST00000393389 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
ANKRD42-202ENST00000393389 MT1HP80294 61 aa3.54□□□□□ -1.84
ANKRD42-202ENST00000393389 MT1FP04733 61 aa3.53□□□□□ -1.84
ANKRD42-202ENST00000393389 MT2AP02795 61 aa3.53□□□□□ -1.84
ANKRD42-202ENST00000393389 HMCN2Q8NDA2 5059 aa3.51□□□□□ -1.85
ANKRD42-202ENST00000393389 KRTAP19-1Q8IUB9 90 aa3.49□□□□□ -1.85
ANKRD42-202ENST00000393389 MUC17Q685J3 4493 aa3.49□□□□□ -1.85
ANKRD42-202ENST00000393389 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
ANKRD42-202ENST00000393389 KRTAP19-2Q3LHN2 52 aa3.44□□□□□ -1.86
ANKRD42-202ENST00000393389 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
ANKRD42-202ENST00000393389 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
ANKRD42-202ENST00000393389 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
ANKRD42-202ENST00000393389 KRTAP10-7P60409 375 aaPredicted RBP3.36□□□□□ -1.87
ANKRD42-202ENST00000393389 SYNE1Q8NF91 8797 aaKnown RBP3.34□□□□□ -1.87
ANKRD42-202ENST00000393389 KRTAP9-8Q9BYQ0 159 aa3.33□□□□□ -1.88
ANKRD42-202ENST00000393389 KRTAP8-1Q8IUC2 63 aa3.32□□□□□ -1.88
ANKRD42-202ENST00000393389 MT1XP80297 61 aa3.31□□□□□ -1.88
ANKRD42-202ENST00000393389 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
ANKRD42-202ENST00000393389 USH2AO75445 5202 aa3.31□□□□□ -1.88
ANKRD42-202ENST00000393389 MT1BP07438 61 aa3.3□□□□□ -1.88
ANKRD42-202ENST00000393389 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
ANKRD42-202ENST00000393389 INE1O15225 51 aa3.29□□□□□ -1.88
ANKRD42-202ENST00000393389 KRTAP19-8Q3LI54 63 aa3.25□□□□□ -1.89
ANKRD42-202ENST00000393389 KRTAP4-8A0A0G2JLE6 195 aa3.25□□□□□ -1.89
ANKRD42-202ENST00000393389 KRTAP4-8Q9BYQ9 185 aa3.25□□□□□ -1.89
ANKRD42-202ENST00000393389 SPRR5A0A1B0GTR4 108 aa3.23□□□□□ -1.89
ANKRD42-202ENST00000393389 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
ANKRD42-202ENST00000393389 LCE3CQ5T5A8 94 aa3.19□□□□□ -1.9
ANKRD42-202ENST00000393389 KRTAP9-3Q9BYQ3 159 aa3.19□□□□□ -1.9
ANKRD42-202ENST00000393389 KMT2DO14686 5537 aa3.16□□□□□ -1.9
ANKRD42-202ENST00000393389 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.91
ANKRD42-202ENST00000393389 SPRR2FQ96RM1 72 aa3.15□□□□□ -1.91
ANKRD42-202ENST00000393389 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
ANKRD42-202ENST00000393389 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
ANKRD42-202ENST00000393389 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms