RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 H0YAA0 97 aa9.9□□□□□ -0.83
TRAF3-203ENST00000392745 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
TRAF3-203ENST00000392745 A8MUU9 505 aa9.82□□□□□ -0.84
TRAF3-203ENST00000392745 C20orf166-AS1Q96NR2 134 aa9.8□□□□□ -0.84
TRAF3-203ENST00000392745 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
TRAF3-203ENST00000392745 KRTAP4-5Q9BYR2 181 aa9.79□□□□□ -0.84
TRAF3-203ENST00000392745 A0A1B0GU33 70 aa9.76□□□□□ -0.85
TRAF3-203ENST00000392745 H1FX-AS1Q4G0G2 97 aa9.71□□□□□ -0.85
TRAF3-203ENST00000392745 KRTAP25-1Q3LHN0 102 aa9.68□□□□□ -0.86
TRAF3-203ENST00000392745 ABCA13Q86UQ4 5058 aa9.63□□□□□ -0.87
TRAF3-203ENST00000392745 H3BS24 57 aa9.62□□□□□ -0.87
TRAF3-203ENST00000392745 XP32Q5T750 250 aa9.58□□□□□ -0.88
TRAF3-203ENST00000392745 BIRC6Q9NR09 4857 aa9.57□□□□□ -0.88
TRAF3-203ENST00000392745 CRIPTQ9P021 101 aa9.57□□□□□ -0.88
TRAF3-203ENST00000392745 COX6B2Q6YFQ2 88 aa9.56□□□□□ -0.88
TRAF3-203ENST00000392745 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
TRAF3-203ENST00000392745 HERC2O95714 4834 aa9.53□□□□□ -0.88
TRAF3-203ENST00000392745 ROMO1P60602 79 aa9.49□□□□□ -0.89
TRAF3-203ENST00000392745 K7ERS5 55 aa9.47□□□□□ -0.89
TRAF3-203ENST00000392745 LPAP08519 4548 aa9.45□□□□□ -0.9
TRAF3-203ENST00000392745 LRP2P98164 4655 aa9.45□□□□□ -0.9
TRAF3-203ENST00000392745 TPRXLQ17RH7 258 aa9.42□□□□□ -0.9
TRAF3-203ENST00000392745 KRTAP10-6P60371 365 aaPredicted RBP9.38□□□□□ -0.91
TRAF3-203ENST00000392745 J3QL48 77 aa9.37□□□□□ -0.91
TRAF3-203ENST00000392745 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
TRAF3-203ENST00000392745 KRTAP3-3Q9BYR6 98 aa9.36□□□□□ -0.91
TRAF3-203ENST00000392745 A0A0D9SG42 100 aa9.33□□□□□ -0.92
TRAF3-203ENST00000392745 KRTAP3-2Q9BYR7 98 aa9.28□□□□□ -0.92
TRAF3-203ENST00000392745 P0C880 135 aa9.26□□□□□ -0.93
TRAF3-203ENST00000392745 PCLOQ9Y6V0 5065 aa9.22□□□□□ -0.93
TRAF3-203ENST00000392745 S4R3F8 94 aa9.17□□□□□ -0.94
TRAF3-203ENST00000392745 C10orf95Q9H7T3 257 aa9.16□□□□□ -0.94
TRAF3-203ENST00000392745 SPINT4Q6UDR6 99 aa9.1□□□□□ -0.95
TRAF3-203ENST00000392745 HERC1Q15751 4861 aa9.09□□□□□ -0.95
TRAF3-203ENST00000392745 KRTAP12-2P59991 146 aa9.07□□□□□ -0.96
TRAF3-203ENST00000392745 SEC61BP60468 96 aaKnown RBP9.06□□□□□ -0.96
TRAF3-203ENST00000392745 MUC17Q685J3 4493 aa9.04□□□□□ -0.96
TRAF3-203ENST00000392745 KRTAP4-1Q9BYQ7 146 aa9.02□□□□□ -0.97
TRAF3-203ENST00000392745 KRTAP12-1P59990 96 aa8.96□□□□□ -0.98
TRAF3-203ENST00000392745 HMCN2Q8NDA2 5059 aa8.95□□□□□ -0.98
TRAF3-203ENST00000392745 KRTAP15-1Q3LI76 137 aa8.91□□□□□ -0.98
TRAF3-203ENST00000392745 MUC2Q02817 5179 aa8.87□□□□□ -0.99
TRAF3-203ENST00000392745 NDUFAF8A1L188 74 aa8.83□□□□□ -1
TRAF3-203ENST00000392745 KRTAP19-2Q3LHN2 52 aa8.79□□□□□ -1
TRAF3-203ENST00000392745 M0QZ58 72 aa8.77□□□□□ -1.01
TRAF3-203ENST00000392745 FLGP20930 4061 aaPredicted RBP8.59□□□□□ -1.03
TRAF3-203ENST00000392745 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
TRAF3-203ENST00000392745 R4GN34 69 aa8.55□□□□□ -1.04
TRAF3-203ENST00000392745 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
TRAF3-203ENST00000392745 LORP23490 312 aaPredicted RBP8.47□□□□□ -1.05
TRAF3-203ENST00000392745 LCE2CQ5TA81 110 aa8.47□□□□□ -1.05
TRAF3-203ENST00000392745 FAT4Q6V0I7 4981 aa8.47□□□□□ -1.05
TRAF3-203ENST00000392745 PLAC4Q8WY50 150 aa8.38□□□□□ -1.07
TRAF3-203ENST00000392745 MT1HP80294 61 aa8.26□□□□□ -1.09
TRAF3-203ENST00000392745 M0R2T5 61 aa8.19□□□□□ -1.1
TRAF3-203ENST00000392745 CAMK2N1Q7Z7J9 78 aa8.15□□□□□ -1.1
TRAF3-203ENST00000392745 PP632Q6XCG6 107 aa8.11□□□□□ -1.11
TRAF3-203ENST00000392745 LUZP6Q538Z0 58 aa8.02□□□□□ -1.13
TRAF3-203ENST00000392745 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
TRAF3-203ENST00000392745 MT2AP02795 61 aa8□□□□□ -1.13
TRAF3-203ENST00000392745 MT1FP04733 61 aa7.98□□□□□ -1.13
TRAF3-203ENST00000392745 KRTAP10-10P60014 251 aa7.93□□□□□ -1.14
TRAF3-203ENST00000392745 KRTAP19-1Q8IUB9 90 aa7.93□□□□□ -1.14
TRAF3-203ENST00000392745 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
TRAF3-203ENST00000392745 TNP1P09430 55 aa7.86□□□□□ -1.15
TRAF3-203ENST00000392745 A0A0A0MQY5 61 aa7.79□□□□□ -1.16
TRAF3-203ENST00000392745 LCE2AQ5TA79 106 aaPredicted RBP7.75□□□□□ -1.17
TRAF3-203ENST00000392745 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
TRAF3-203ENST00000392745 SPRR5A0A1B0GTR4 108 aa7.73□□□□□ -1.17
TRAF3-203ENST00000392745 KRTAP9-3Q9BYQ3 159 aa7.71□□□□□ -1.18
TRAF3-203ENST00000392745 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
TRAF3-203ENST00000392745 MT1BP07438 61 aa7.6□□□□□ -1.19
TRAF3-203ENST00000392745 LCE2BO14633 110 aa7.48□□□□□ -1.21
TRAF3-203ENST00000392745 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
TRAF3-203ENST00000392745 MT1XP80297 61 aa7.42□□□□□ -1.22
TRAF3-203ENST00000392745 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
TRAF3-203ENST00000392745 USH2AO75445 5202 aa7.35□□□□□ -1.23
TRAF3-203ENST00000392745 KRTAP8-1Q8IUC2 63 aa7.22□□□□□ -1.25
TRAF3-203ENST00000392745 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
TRAF3-203ENST00000392745 KRTAP10-7P60409 375 aaPredicted RBP7.17□□□□□ -1.26
TRAF3-203ENST00000392745 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
TRAF3-203ENST00000392745 KRTAP10-12P60413 245 aa7.07□□□□□ -1.28
TRAF3-203ENST00000392745 SSPOA2VEC9 5147 aa7.03□□□□□ -1.28
TRAF3-203ENST00000392745 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
TRAF3-203ENST00000392745 INE1O15225 51 aa6.98□□□□□ -1.29
TRAF3-203ENST00000392745 KMT2DO14686 5537 aa6.95□□□□□ -1.3
TRAF3-203ENST00000392745 KRTAP19-6Q3LI70 58 aa6.88□□□□□ -1.31
TRAF3-203ENST00000392745 KRTAP4-8A0A0G2JLE6 195 aa6.87□□□□□ -1.31
TRAF3-203ENST00000392745 LCE2DQ5TA82 110 aaPredicted RBP6.87□□□□□ -1.31
TRAF3-203ENST00000392745 KRTAP4-8Q9BYQ9 185 aa6.87□□□□□ -1.31
TRAF3-203ENST00000392745 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
TRAF3-203ENST00000392745 KRTAP19-5Q3LI72 72 aa6.76□□□□□ -1.33
TRAF3-203ENST00000392745 LCE3CQ5T5A8 94 aa6.67□□□□□ -1.34
TRAF3-203ENST00000392745 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
TRAF3-203ENST00000392745 KRTAP19-7Q3SYF9 63 aa6.62□□□□□ -1.35
TRAF3-203ENST00000392745 KRTAP9-6A8MVA2 160 aa6.53□□□□□ -1.36
TRAF3-203ENST00000392745 CRCT1Q9UGL9 99 aa6.47□□□□□ -1.37
TRAF3-203ENST00000392745 MT1EP04732 61 aa6.46□□□□□ -1.38
TRAF3-203ENST00000392745 KRTAP9-6A0A140TA67 174 aa6.45□□□□□ -1.38
TRAF3-203ENST00000392745 KRTAP4-7Q9BYR0 210 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms