RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 KRTAP8-1Q8IUC2 63 aa1.77□□□□□ -2.13
UBR3-202ENST00000392632 FBN2P35556 2912 aa1.77□□□□□ -2.13
UBR3-202ENST00000392632 ADGRG4Q8IZF6 3080 aa1.77□□□□□ -2.13
UBR3-202ENST00000392632 SVEP1Q4LDE5 3571 aa1.76□□□□□ -2.13
UBR3-202ENST00000392632 MXRA5Q9NR99 2828 aa1.76□□□□□ -2.13
UBR3-202ENST00000392632 KRTAP10-6P60371 365 aaPredicted RBP1.76□□□□□ -2.13
UBR3-202ENST00000392632 KRTAP3-1Q9BYR8 98 aa1.76□□□□□ -2.13
UBR3-202ENST00000392632 KRTAP4-12Q9BQ66 201 aa1.74□□□□□ -2.13
UBR3-202ENST00000392632 KRTAP4-2Q9BYR5 136 aa1.73□□□□□ -2.13
UBR3-202ENST00000392632 ANK3Q12955 4377 aaKnown RBP1.72□□□□□ -2.13
UBR3-202ENST00000392632 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
UBR3-202ENST00000392632 CELSR1Q9NYQ6 3014 aa1.72□□□□□ -2.13
UBR3-202ENST00000392632 DNAH7Q8WXX0 4024 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 NBPF19A0A087WUL8 3843 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP4-5Q9BYR2 181 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP10-5P60370 271 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP10-7P60409 375 aaPredicted RBP1.71□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP9-2Q9BYQ4 174 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 DNAH6Q9C0G6 4158 aa1.71□□□□□ -2.14
UBR3-202ENST00000392632 HRNRQ86YZ3 2850 aaPredicted RBP1.7□□□□□ -2.14
UBR3-202ENST00000392632 ZNF469Q96JG9 3925 aaPredicted RBP1.69□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP9-6A0A140TA67 174 aa1.69□□□□□ -2.14
UBR3-202ENST00000392632 DNAH3Q8TD57 4116 aa1.69□□□□□ -2.14
UBR3-202ENST00000392632 CMYA5Q8N3K9 4069 aa1.69□□□□□ -2.14
UBR3-202ENST00000392632 ANK2Q01484 3957 aa1.68□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.68□□□□□ -2.14
UBR3-202ENST00000392632 OTOGQ6ZRI0 2925 aa1.68□□□□□ -2.14
UBR3-202ENST00000392632 CUBNO60494 3623 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP5-2Q701N4 177 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP9-9Q9BYP9 154 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP9-4Q9BYQ2 154 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 COL7A1Q02388 2944 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 RYR3Q15413 4870 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 DNAH17Q9UFH2 4485 aa1.67□□□□□ -2.14
UBR3-202ENST00000392632 LCE3AQ5TA76 89 aa1.66□□□□□ -2.14
UBR3-202ENST00000392632 HECTD4Q9Y4D8 3996 aa1.66□□□□□ -2.14
UBR3-202ENST00000392632 TRRAPQ9Y4A5 3859 aa1.66□□□□□ -2.14
UBR3-202ENST00000392632 DNAH2Q9P225 4427 aa1.65□□□□□ -2.14
UBR3-202ENST00000392632 KRTAP19-1Q8IUB9 90 aa1.65□□□□□ -2.15
UBR3-202ENST00000392632 BIRC6Q9NR09 4857 aa1.64□□□□□ -2.15
UBR3-202ENST00000392632 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
UBR3-202ENST00000392632 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
UBR3-202ENST00000392632 KRTAP4-8A0A0G2JLE6 195 aa1.62□□□□□ -2.15
UBR3-202ENST00000392632 SPRR2FQ96RM1 72 aa1.62□□□□□ -2.15
UBR3-202ENST00000392632 FRAS1Q86XX4 4008 aa1.62□□□□□ -2.15
UBR3-202ENST00000392632 KRTAP10-4P60372 401 aaPredicted RBP1.62□□□□□ -2.15
UBR3-202ENST00000392632 KRTAP5-3Q6L8H2 238 aa1.62□□□□□ -2.15
UBR3-202ENST00000392632 HYDINQ4G0P3 5121 aa1.61□□□□□ -2.15
UBR3-202ENST00000392632 DNAH9Q9NYC9 4486 aa1.61□□□□□ -2.15
UBR3-202ENST00000392632 LCE1DQ5T752 114 aa1.6□□□□□ -2.15
UBR3-202ENST00000392632 DNAH10Q8IVF4 4471 aa1.6□□□□□ -2.15
UBR3-202ENST00000392632 PKHD1L1Q86WI1 4243 aa1.59□□□□□ -2.15
UBR3-202ENST00000392632 KRTAP4-7Q9BYR0 210 aa1.59□□□□□ -2.15
UBR3-202ENST00000392632 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.16
UBR3-202ENST00000392632 HERC2O95714 4834 aa1.58□□□□□ -2.16
UBR3-202ENST00000392632 KMT2CQ8NEZ4 4911 aaKnown RBP1.58□□□□□ -2.16
UBR3-202ENST00000392632 KMT2AQ03164 3969 aa1.57□□□□□ -2.16
UBR3-202ENST00000392632 SACSQ9NZJ4 4579 aa1.57□□□□□ -2.16
UBR3-202ENST00000392632 MYCBP2O75592 4640 aa1.56□□□□□ -2.16
UBR3-202ENST00000392632 EPPK1P58107 5090 aaKnown RBP1.56□□□□□ -2.16
UBR3-202ENST00000392632 MT1HP80294 61 aa1.56□□□□□ -2.16
UBR3-202ENST00000392632 KRTAP12-4P60329 112 aa1.55□□□□□ -2.16
UBR3-202ENST00000392632 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
UBR3-202ENST00000392632 PKHD1P08F94 4074 aa1.55□□□□□ -2.16
UBR3-202ENST00000392632 MT2AP02795 61 aa1.55□□□□□ -2.16
UBR3-202ENST00000392632 LYSTQ99698 3801 aa1.55□□□□□ -2.16
UBR3-202ENST00000392632 KRTAP4-9Q9BYQ8 210 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 PKD1P98161 4303 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 SPRR2EP22531 72 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 SPRR2BP35325 72 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 SPRR2AP35326 72 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
UBR3-202ENST00000392632 CSMD3Q7Z407 3707 aa1.53□□□□□ -2.16
UBR3-202ENST00000392632 SPRR5A0A1B0GTR4 108 aa1.52□□□□□ -2.17
UBR3-202ENST00000392632 RYR2Q92736 4967 aa1.51□□□□□ -2.17
UBR3-202ENST00000392632 SPRR2DP22532 72 aa1.51□□□□□ -2.17
UBR3-202ENST00000392632 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
UBR3-202ENST00000392632 HSPG2P98160 4391 aa1.5□□□□□ -2.17
UBR3-202ENST00000392632 KRTAP9-8Q9BYQ0 159 aa1.5□□□□□ -2.17
UBR3-202ENST00000392632 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
UBR3-202ENST00000392632 LCE3CQ5T5A8 94 aa1.5□□□□□ -2.17
UBR3-202ENST00000392632 GPR98Q8WXG9 6306 aa1.49□□□□□ -2.17
UBR3-202ENST00000392632 KRTAP19-5Q3LI72 72 aa1.49□□□□□ -2.17
UBR3-202ENST00000392632 LCE5AQ5TCM9 118 aa1.49□□□□□ -2.17
UBR3-202ENST00000392632 DNAH11Q96DT5 4516 aa1.49□□□□□ -2.17
UBR3-202ENST00000392632 KRTAP4-11Q9BYQ6 195 aa1.48□□□□□ -2.17
UBR3-202ENST00000392632 TNXBP22105 4242 aa1.48□□□□□ -2.17
UBR3-202ENST00000392632 KRTAP9-7A8MTY7 169 aa1.48□□□□□ -2.17
UBR3-202ENST00000392632 MT1FP04733 61 aa1.48□□□□□ -2.17
UBR3-202ENST00000392632 VPS13BQ7Z7G8 4022 aa1.48□□□□□ -2.17
UBR3-202ENST00000392632 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
UBR3-202ENST00000392632 LCE4AQ5TA78 99 aa1.46□□□□□ -2.18
UBR3-202ENST00000392632 KIAA1109Q2LD37 5005 aa1.46□□□□□ -2.18
UBR3-202ENST00000392632 MT1GP13640 62 aa1.46□□□□□ -2.18
UBR3-202ENST00000392632 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
UBR3-202ENST00000392632 KRTAP9-3Q9BYQ3 159 aa1.45□□□□□ -2.18
UBR3-202ENST00000392632 MUC2Q02817 5179 aa1.45□□□□□ -2.18
UBR3-202ENST00000392632 KRTAP4-1Q9BYQ7 146 aa1.45□□□□□ -2.18
UBR3-202ENST00000392632 KRTAP19-8Q3LI54 63 aa1.44□□□□□ -2.18
UBR3-202ENST00000392632 RYR1P21817 5038 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms