RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 MP68P56378 58 aa3.47□□□□□ -1.85
UBBP1-201ENST00000392399 SPINK7P58062 85 aa3.47□□□□□ -1.85
UBBP1-201ENST00000392399 C20orf197Q8N268 126 aa3.46□□□□□ -1.86
UBBP1-201ENST00000392399 RBM12B-AS1Q9P1G2 102 aa3.46□□□□□ -1.86
UBBP1-201ENST00000392399 FLGP20930 4061 aaPredicted RBP3.45□□□□□ -1.86
UBBP1-201ENST00000392399 MPLKIPQ8TAP9 179 aa3.45□□□□□ -1.86
UBBP1-201ENST00000392399 H0Y9P7 68 aa3.44□□□□□ -1.86
UBBP1-201ENST00000392399 HRES1P13985 223 aa3.44□□□□□ -1.86
UBBP1-201ENST00000392399 TMEM258P61165 79 aa3.44□□□□□ -1.86
UBBP1-201ENST00000392399 Q5W150 140 aa3.44□□□□□ -1.86
UBBP1-201ENST00000392399 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
UBBP1-201ENST00000392399 KRTAP23-1A1A580 65 aa3.43□□□□□ -1.86
UBBP1-201ENST00000392399 ATP5EP56381 51 aaPredicted RBP3.43□□□□□ -1.86
UBBP1-201ENST00000392399 FAM236DA0A1B0GTK5 79 aa3.42□□□□□ -1.86
UBBP1-201ENST00000392399 H7BZZ5 65 aa3.42□□□□□ -1.86
UBBP1-201ENST00000392399 FAM236CP0DP71 79 aa3.42□□□□□ -1.86
UBBP1-201ENST00000392399 MT1HP80294 61 aa3.42□□□□□ -1.86
UBBP1-201ENST00000392399 C7orf65Q6ZTY9 151 aa3.42□□□□□ -1.86
UBBP1-201ENST00000392399 IGKV2D-30A0A075B6S6 120 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 IGKV2-30P06310 120 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 KRTAP15-1Q3LI76 137 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 SPANXA2-OT1Q8N9U9 137 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 C1orf64Q8NEQ6 169 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 LINC00208Q96KT6 92 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 CYSTM1Q9H1C7 97 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 SNURFQ9Y675 71 aa3.4□□□□□ -1.87
UBBP1-201ENST00000392399 M0R2T5 61 aa3.39□□□□□ -1.87
UBBP1-201ENST00000392399 CYP4F30PQ9H0H9 118 aa3.37□□□□□ -1.87
UBBP1-201ENST00000392399 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
UBBP1-201ENST00000392399 RPS28P62857 69 aaKnown RBP3.34□□□□□ -1.87
UBBP1-201ENST00000392399 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
UBBP1-201ENST00000392399 C4orf26Q17RF5 130 aa3.33□□□□□ -1.88
UBBP1-201ENST00000392399 SERP1Q9Y6X1 66 aa3.32□□□□□ -1.88
UBBP1-201ENST00000392399 DMAC1Q96GE9 116 aa3.3□□□□□ -1.88
UBBP1-201ENST00000392399 A8MUN3 132 aa3.29□□□□□ -1.88
UBBP1-201ENST00000392399 ACYP2P14621 99 aa3.26□□□□□ -1.89
UBBP1-201ENST00000392399 COA5Q86WW8 74 aa3.24□□□□□ -1.89
UBBP1-201ENST00000392399 S4R3F8 94 aa3.24□□□□□ -1.89
UBBP1-201ENST00000392399 SMIM26A0A096LP01 95 aa3.23□□□□□ -1.89
UBBP1-201ENST00000392399 MT2AP02795 61 aa3.23□□□□□ -1.89
UBBP1-201ENST00000392399 CSAG1Q6PB30 78 aa3.23□□□□□ -1.89
UBBP1-201ENST00000392399 KRTAP10-10P60014 251 aa3.21□□□□□ -1.9
UBBP1-201ENST00000392399 LCA10Q71F78 164 aa3.21□□□□□ -1.9
UBBP1-201ENST00000392399 V9GYY9 64 aa3.2□□□□□ -1.9
UBBP1-201ENST00000392399 MT1FP04733 61 aa3.19□□□□□ -1.9
UBBP1-201ENST00000392399 CHKB-CPT1BH3BT56 60 aa3.18□□□□□ -1.9
UBBP1-201ENST00000392399 Q1T7F1 81 aa3.18□□□□□ -1.9
UBBP1-201ENST00000392399 SPTSSBQ8NFR3 76 aa3.18□□□□□ -1.9
UBBP1-201ENST00000392399 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
UBBP1-201ENST00000392399 LINC01558Q9Y6Z2 57 aa3.15□□□□□ -1.91
UBBP1-201ENST00000392399 H0YAA0 97 aa3.13□□□□□ -1.91
UBBP1-201ENST00000392399 USH2AO75445 5202 aa3.13□□□□□ -1.91
UBBP1-201ENST00000392399 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
UBBP1-201ENST00000392399 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
UBBP1-201ENST00000392399 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
UBBP1-201ENST00000392399 SSPOA2VEC9 5147 aa3.07□□□□□ -1.92
UBBP1-201ENST00000392399 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
UBBP1-201ENST00000392399 A0A1B0GU69 56 aa3.06□□□□□ -1.92
UBBP1-201ENST00000392399 SEC61GP60059 68 aa3.06□□□□□ -1.92
UBBP1-201ENST00000392399 Q5VV11 94 aa3.06□□□□□ -1.92
UBBP1-201ENST00000392399 ADM2Q7Z4H4 148 aa3.06□□□□□ -1.92
UBBP1-201ENST00000392399 PSPHP1O15172 72 aa3.04□□□□□ -1.92
UBBP1-201ENST00000392399 KRTAP19-8Q3LI54 63 aa3.02□□□□□ -1.93
UBBP1-201ENST00000392399 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
UBBP1-201ENST00000392399 KRTAP19-6Q3LI70 58 aa3□□□□□ -1.93
UBBP1-201ENST00000392399 R4GN34 69 aa3□□□□□ -1.93
UBBP1-201ENST00000392399 UQCR11O14957 56 aa2.99□□□□□ -1.93
UBBP1-201ENST00000392399 P0C880 135 aa2.99□□□□□ -1.93
UBBP1-201ENST00000392399 MT1BP07438 61 aa2.98□□□□□ -1.93
UBBP1-201ENST00000392399 FCGBPQ9Y6R7 5405 aaPredicted RBP2.98□□□□□ -1.93
UBBP1-201ENST00000392399 A0A1B0GU33 70 aa2.97□□□□□ -1.93
UBBP1-201ENST00000392399 A6NED7 52 aa2.97□□□□□ -1.93
UBBP1-201ENST00000392399 CDC42SE1Q9NRR8 79 aa2.97□□□□□ -1.93
UBBP1-201ENST00000392399 M0QZ58 72 aa2.96□□□□□ -1.94
UBBP1-201ENST00000392399 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
UBBP1-201ENST00000392399 MIR22HGQ0VDD5 57 aa2.94□□□□□ -1.94
UBBP1-201ENST00000392399 PRO0628Q9UI54 55 aa2.94□□□□□ -1.94
UBBP1-201ENST00000392399 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
UBBP1-201ENST00000392399 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
UBBP1-201ENST00000392399 A6NN06 94 aa2.91□□□□□ -1.94
UBBP1-201ENST00000392399 KRTAP10-5P60370 271 aa2.9□□□□□ -1.95
UBBP1-201ENST00000392399 LINC01554Q52M75 96 aa2.89□□□□□ -1.95
UBBP1-201ENST00000392399 PRO2289Q9P1D8 64 aa2.88□□□□□ -1.95
UBBP1-201ENST00000392399 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
UBBP1-201ENST00000392399 KRTAP13-4Q3LI77 160 aa2.87□□□□□ -1.95
UBBP1-201ENST00000392399 A8MU10 97 aa2.84□□□□□ -1.95
UBBP1-201ENST00000392399 K7ERS5 55 aa2.84□□□□□ -1.95
UBBP1-201ENST00000392399 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
UBBP1-201ENST00000392399 MT1XP80297 61 aa2.82□□□□□ -1.96
UBBP1-201ENST00000392399 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
UBBP1-201ENST00000392399 KRTAP10-7P60409 375 aaPredicted RBP2.8□□□□□ -1.96
UBBP1-201ENST00000392399 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
UBBP1-201ENST00000392399 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.79□□□□□ -1.96
UBBP1-201ENST00000392399 A0A0D9SG42 100 aa2.78□□□□□ -1.96
UBBP1-201ENST00000392399 PMAIP1Q13794 54 aa2.78□□□□□ -1.96
UBBP1-201ENST00000392399 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
UBBP1-201ENST00000392399 CAMK2N1Q7Z7J9 78 aa2.77□□□□□ -1.97
UBBP1-201ENST00000392399 KRTAP12-2P59991 146 aa2.76□□□□□ -1.97
UBBP1-201ENST00000392399 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
UBBP1-201ENST00000392399 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms