RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 UQCR11O14957 56 aa9.78□□□□□ -0.84
ERCC2-203ENST00000391944 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
ERCC2-203ENST00000391944 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
ERCC2-203ENST00000391944 LPAP08519 4548 aa9.72□□□□□ -0.85
ERCC2-203ENST00000391944 MIR22HGQ0VDD5 57 aa9.71□□□□□ -0.86
ERCC2-203ENST00000391944 HERC2O95714 4834 aa9.7□□□□□ -0.86
ERCC2-203ENST00000391944 J3QL48 77 aa9.68□□□□□ -0.86
ERCC2-203ENST00000391944 KRTAP3-3Q9BYR6 98 aa9.67□□□□□ -0.86
ERCC2-203ENST00000391944 BIRC6Q9NR09 4857 aa9.67□□□□□ -0.86
ERCC2-203ENST00000391944 S4R3F8 94 aa9.63□□□□□ -0.87
ERCC2-203ENST00000391944 A6NN06 94 aa9.61□□□□□ -0.87
ERCC2-203ENST00000391944 H1FX-AS1Q4G0G2 97 aa9.61□□□□□ -0.87
ERCC2-203ENST00000391944 A0A1B0GU33 70 aa9.58□□□□□ -0.88
ERCC2-203ENST00000391944 RBM12B-AS1Q9P1G2 102 aa9.56□□□□□ -0.88
ERCC2-203ENST00000391944 SEC61BP60468 96 aaKnown RBP9.55□□□□□ -0.88
ERCC2-203ENST00000391944 H0YAA0 97 aa9.51□□□□□ -0.89
ERCC2-203ENST00000391944 KRTAP10-6P60371 365 aaPredicted RBP9.46□□□□□ -0.9
ERCC2-203ENST00000391944 KRTAP3-2Q9BYR7 98 aa9.44□□□□□ -0.9
ERCC2-203ENST00000391944 KTN1-AS1Q86SY8 53 aa9.43□□□□□ -0.9
ERCC2-203ENST00000391944 MUC17Q685J3 4493 aa9.42□□□□□ -0.9
ERCC2-203ENST00000391944 CSAG1Q6PB30 78 aa9.37□□□□□ -0.91
ERCC2-203ENST00000391944 KRTAP4-1Q9BYQ7 146 aa9.37□□□□□ -0.91
ERCC2-203ENST00000391944 P0C880 135 aa9.31□□□□□ -0.92
ERCC2-203ENST00000391944 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
ERCC2-203ENST00000391944 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.93
ERCC2-203ENST00000391944 KRTAP13-4Q3LI77 160 aa9.26□□□□□ -0.93
ERCC2-203ENST00000391944 HERC1Q15751 4861 aa9.21□□□□□ -0.93
ERCC2-203ENST00000391944 KRTAP19-2Q3LHN2 52 aa9.2□□□□□ -0.94
ERCC2-203ENST00000391944 K7ERS5 55 aa9.16□□□□□ -0.94
ERCC2-203ENST00000391944 HMCN2Q8NDA2 5059 aa9.15□□□□□ -0.94
ERCC2-203ENST00000391944 A0A0D9SG42 100 aa9.12□□□□□ -0.95
ERCC2-203ENST00000391944 M0QZ58 72 aa9.08□□□□□ -0.96
ERCC2-203ENST00000391944 PRAC1Q96KF2 57 aa9.08□□□□□ -0.96
ERCC2-203ENST00000391944 MUC2Q02817 5179 aa9.05□□□□□ -0.96
ERCC2-203ENST00000391944 FLGP20930 4061 aaPredicted RBP8.98□□□□□ -0.97
ERCC2-203ENST00000391944 KRTAP12-2P59991 146 aa8.93□□□□□ -0.98
ERCC2-203ENST00000391944 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
ERCC2-203ENST00000391944 R4GN34 69 aa8.91□□□□□ -0.98
ERCC2-203ENST00000391944 ROMO1P60602 79 aa8.88□□□□□ -0.99
ERCC2-203ENST00000391944 LORP23490 312 aaPredicted RBP8.87□□□□□ -0.99
ERCC2-203ENST00000391944 SPINT4Q6UDR6 99 aa8.87□□□□□ -0.99
ERCC2-203ENST00000391944 LCE2CQ5TA81 110 aa8.8□□□□□ -1
ERCC2-203ENST00000391944 LINC01554Q52M75 96 aa8.79□□□□□ -1
ERCC2-203ENST00000391944 KRTAP25-1Q3LHN0 102 aa8.75□□□□□ -1.01
ERCC2-203ENST00000391944 RNF213Q63HN8 5207 aa8.7□□□□□ -1.02
ERCC2-203ENST00000391944 CRIPTQ9P021 101 aa8.68□□□□□ -1.02
ERCC2-203ENST00000391944 UBR4Q5T4S7 5183 aa8.67□□□□□ -1.02
ERCC2-203ENST00000391944 FAT4Q6V0I7 4981 aa8.65□□□□□ -1.03
ERCC2-203ENST00000391944 MT1HP80294 61 aa8.58□□□□□ -1.04
ERCC2-203ENST00000391944 M0R2T5 61 aa8.53□□□□□ -1.04
ERCC2-203ENST00000391944 C10orf95Q9H7T3 257 aa8.47□□□□□ -1.05
ERCC2-203ENST00000391944 CAMK2N1Q7Z7J9 78 aa8.4□□□□□ -1.07
ERCC2-203ENST00000391944 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
ERCC2-203ENST00000391944 MT2AP02795 61 aa8.34□□□□□ -1.07
ERCC2-203ENST00000391944 KRTAP19-1Q8IUB9 90 aa8.34□□□□□ -1.07
ERCC2-203ENST00000391944 KRTAP9-8Q9BYQ0 159 aa8.34□□□□□ -1.07
ERCC2-203ENST00000391944 MT1FP04733 61 aa8.31□□□□□ -1.08
ERCC2-203ENST00000391944 KRTAP10-10P60014 251 aa8.3□□□□□ -1.08
ERCC2-203ENST00000391944 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
ERCC2-203ENST00000391944 KRTAP19-8Q3LI54 63 aa8.09□□□□□ -1.11
ERCC2-203ENST00000391944 TNP1P09430 55 aa8.06□□□□□ -1.12
ERCC2-203ENST00000391944 PP632Q6XCG6 107 aa8.04□□□□□ -1.12
ERCC2-203ENST00000391944 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
ERCC2-203ENST00000391944 MT1BP07438 61 aa7.97□□□□□ -1.13
ERCC2-203ENST00000391944 KRTAP23-1A1A580 65 aa7.94□□□□□ -1.14
ERCC2-203ENST00000391944 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
ERCC2-203ENST00000391944 KRTAP15-1Q3LI76 137 aa7.87□□□□□ -1.15
ERCC2-203ENST00000391944 KRTAP10-5P60370 271 aa7.81□□□□□ -1.16
ERCC2-203ENST00000391944 MT1XP80297 61 aa7.81□□□□□ -1.16
ERCC2-203ENST00000391944 H3BS24 57 aa7.76□□□□□ -1.17
ERCC2-203ENST00000391944 LCE2BO14633 110 aa7.73□□□□□ -1.17
ERCC2-203ENST00000391944 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
ERCC2-203ENST00000391944 PRO2289Q9P1D8 64 aa7.62□□□□□ -1.19
ERCC2-203ENST00000391944 KRTAP10-7P60409 375 aaPredicted RBP7.53□□□□□ -1.2
ERCC2-203ENST00000391944 KRTAP10-12P60413 245 aa7.52□□□□□ -1.21
ERCC2-203ENST00000391944 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
ERCC2-203ENST00000391944 NDUFAF8A1L188 74 aa7.45□□□□□ -1.22
ERCC2-203ENST00000391944 USH2AO75445 5202 aa7.45□□□□□ -1.22
ERCC2-203ENST00000391944 SPRR5A0A1B0GTR4 108 aa7.34□□□□□ -1.23
ERCC2-203ENST00000391944 KRTAP12-3P60328 96 aa7.34□□□□□ -1.23
ERCC2-203ENST00000391944 LUZP6Q538Z0 58 aa7.28□□□□□ -1.24
ERCC2-203ENST00000391944 SSPOA2VEC9 5147 aa7.2□□□□□ -1.26
ERCC2-203ENST00000391944 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
ERCC2-203ENST00000391944 KRTAP4-8A0A0G2JLE6 195 aa7.14□□□□□ -1.27
ERCC2-203ENST00000391944 KRTAP4-8Q9BYQ9 185 aa7.14□□□□□ -1.27
ERCC2-203ENST00000391944 KMT2DO14686 5537 aa7.12□□□□□ -1.27
ERCC2-203ENST00000391944 KRTAP19-6Q3LI70 58 aa7.12□□□□□ -1.27
ERCC2-203ENST00000391944 A0A0A0MQY5 61 aa7.01□□□□□ -1.29
ERCC2-203ENST00000391944 LCE2DQ5TA82 110 aaPredicted RBP7.01□□□□□ -1.29
ERCC2-203ENST00000391944 FSIP2Q5CZC0 6907 aa6.99□□□□□ -1.29
ERCC2-203ENST00000391944 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.29
ERCC2-203ENST00000391944 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
ERCC2-203ENST00000391944 MT1EP04732 61 aa6.8□□□□□ -1.32
ERCC2-203ENST00000391944 KRTAP19-4Q3LI73 84 aa6.76□□□□□ -1.33
ERCC2-203ENST00000391944 FCGBPQ9Y6R7 5405 aaPredicted RBP6.76□□□□□ -1.33
ERCC2-203ENST00000391944 MT1LQ93083 61 aa6.73□□□□□ -1.33
ERCC2-203ENST00000391944 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
ERCC2-203ENST00000391944 KRTAP9-6A8MVA2 160 aa6.57□□□□□ -1.36
ERCC2-203ENST00000391944 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
ERCC2-203ENST00000391944 MUC12Q9UKN1 5478 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms